test_module/modeling_transkimer.py

# coding=utf-8
# Copyright 2018 The Google AI Language Team Authors and The HuggingFace Inc. team.
# Copyright (c) 2018, NVIDIA CORPORATION.  All rights reserved.
#
# Licensed under the Apache License, Version 2.0 (the "License");
# you may not use this file except in compliance with the License.
# You may obtain a copy of the License at
#
#     http://www.apache.org/licenses/LICENSE-2.0
#
# Unless required by applicable law or agreed to in writing, software
# distributed under the License is distributed on an "AS IS" BASIS,
# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
# See the License for the specific language governing permissions and
# limitations under the License.
"""PyTorch BERT model. """


import math
import os
import warnings
from dataclasses import dataclass
from typing import Optional, Tuple

import torch
import torch.utils.checkpoint
from packaging import version
from torch import nn
from torch.nn import BCEWithLogitsLoss, CrossEntropyLoss, MSELoss

from transformers.activations import ACT2FN
from transformers.file_utils import (
    ModelOutput,
    add_code_sample_docstrings,
    add_start_docstrings,
    add_start_docstrings_to_model_forward,
    replace_return_docstrings,
)
from transformers.modeling_outputs import (
    BaseModelOutputWithPastAndCrossAttentions,
    BaseModelOutputWithPoolingAndCrossAttentions,
    CausalLMOutputWithCrossAttentions,
    MaskedLMOutput,
    MultipleChoiceModelOutput,
    NextSentencePredictorOutput,
    QuestionAnsweringModelOutput,
    SequenceClassifierOutput,
    TokenClassifierOutput,
)
from transformers.modeling_utils import (
    PreTrainedModel,
    apply_chunking_to_forward,
    find_pruneable_heads_and_indices,
    prune_linear_layer,
)
from transformers.utils import logging
from transformers.models.bert.configuration_bert import BertConfig

from .modeling_skim_predictor import SkimPredictor
from .modeling_utils import BaseModelOutputWithPastAndCrossAttentionsSkim, BaseModelOutputWithPoolingAndCrossAttentionsSkim, MaskedLMOutputSkim, QuestionAnsweringModelOutputSkim, SequenceClassifierOutputSkim, convert_softmax_mask_to_digit, trunc_with_mask_batched, masked_softmax

logger = logging.get_logger(__name__)

_CHECKPOINT_FOR_DOC = "bert-base-uncased"
_CONFIG_FOR_DOC = "BertConfig"
_TOKENIZER_FOR_DOC = "BertTokenizer"

BERT_PRETRAINED_MODEL_ARCHIVE_LIST = [
    "bert-base-uncased",
    "bert-large-uncased",
    "bert-base-cased",
    "bert-large-cased",
    "bert-base-multilingual-uncased",
    "bert-base-multilingual-cased",
    "bert-base-chinese",
    "bert-base-german-cased",
    "bert-large-uncased-whole-word-masking",
    "bert-large-cased-whole-word-masking",
    "bert-large-uncased-whole-word-masking-finetuned-squad",
    "bert-large-cased-whole-word-masking-finetuned-squad",
    "bert-base-cased-finetuned-mrpc",
    "bert-base-german-dbmdz-cased",
    "bert-base-german-dbmdz-uncased",
    "cl-tohoku/bert-base-japanese",
    "cl-tohoku/bert-base-japanese-whole-word-masking",
    "cl-tohoku/bert-base-japanese-char",
    "cl-tohoku/bert-base-japanese-char-whole-word-masking",
    "TurkuNLP/bert-base-finnish-cased-v1",
    "TurkuNLP/bert-base-finnish-uncased-v1",
    "wietsedv/bert-base-dutch-cased",
    # See all BERT models at https://huggingface.co/models?filter=bert
]


def load_tf_weights_in_bert(model, config, tf_checkpoint_path):
    """Load tf checkpoints in a pytorch model."""
    try:
        import re

        import numpy as np
        import tensorflow as tf
    except ImportError:
        logger.error(
            "Loading a TensorFlow model in PyTorch, requires TensorFlow to be installed. Please see "
            "https://www.tensorflow.org/install/ for installation instructions."
        )
        raise
    tf_path = os.path.abspath(tf_checkpoint_path)
    logger.info(f"Converting TensorFlow checkpoint from {tf_path}")
    # Load weights from TF model
    init_vars = tf.train.list_variables(tf_path)
    names = []
    arrays = []
    for name, shape in init_vars:
        logger.info(f"Loading TF weight {name} with shape {shape}")
        array = tf.train.load_variable(tf_path, name)
        names.append(name)
        arrays.append(array)

    for name, array in zip(names, arrays):
        name = name.split("/")
        # adam_v and adam_m are variables used in AdamWeightDecayOptimizer to calculated m and v
        # which are not required for using pretrained model
        if any(
            n in ["adam_v", "adam_m", "AdamWeightDecayOptimizer", "AdamWeightDecayOptimizer_1", "global_step"]
            for n in name
        ):
            logger.info(f"Skipping {'/'.join(name)}")
            continue
        pointer = model
        for m_name in name:
            if re.fullmatch(r"[A-Za-z]+_\d+", m_name):
                scope_names = re.split(r"_(\d+)", m_name)
            else:
                scope_names = [m_name]
            if scope_names[0] == "kernel" or scope_names[0] == "gamma":
                pointer = getattr(pointer, "weight")
            elif scope_names[0] == "output_bias" or scope_names[0] == "beta":
                pointer = getattr(pointer, "bias")
            elif scope_names[0] == "output_weights":
                pointer = getattr(pointer, "weight")
            elif scope_names[0] == "squad":
                pointer = getattr(pointer, "classifier")
            else:
                try:
                    pointer = getattr(pointer, scope_names[0])
                except AttributeError:
                    logger.info(f"Skipping {'/'.join(name)}")
                    continue
            if len(scope_names) >= 2:
                num = int(scope_names[1])
                pointer = pointer[num]
        if m_name[-11:] == "_embeddings":
            pointer = getattr(pointer, "weight")
        elif m_name == "kernel":
            array = np.transpose(array)
        try:
            assert (
                pointer.shape == array.shape
            ), f"Pointer shape {pointer.shape} and array shape {array.shape} mismatched"
        except AssertionError as e:
            e.args += (pointer.shape, array.shape)
            raise
        logger.info(f"Initialize PyTorch weight {name}")
        pointer.data = torch.from_numpy(array)
    return model


class BertEmbeddings(nn.Module):
    """Construct the embeddings from word, position and token_type embeddings."""

    def __init__(self, config):
        super().__init__()
        self.word_embeddings = nn.Embedding(config.vocab_size, config.hidden_size, padding_idx=config.pad_token_id)
        self.position_embeddings = nn.Embedding(config.max_position_embeddings, config.hidden_size)
        self.token_type_embeddings = nn.Embedding(config.type_vocab_size, config.hidden_size)

        # self.LayerNorm is not snake-cased to stick with TensorFlow model variable name and be able to load
        # any TensorFlow checkpoint file
        self.LayerNorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
        self.dropout = nn.Dropout(config.hidden_dropout_prob)
        # position_ids (1, len position emb) is contiguous in memory and exported when serialized
        self.position_embedding_type = getattr(config, "position_embedding_type", "absolute")
        self.register_buffer("position_ids", torch.arange(config.max_position_embeddings).expand((1, -1)))
        if version.parse(torch.__version__) > version.parse("1.6.0"):
            self.register_buffer(
                "token_type_ids",
                torch.zeros(self.position_ids.size(), dtype=torch.long, device=self.position_ids.device),
                persistent=False,
            )

    def forward(
        self, input_ids=None, token_type_ids=None, position_ids=None, inputs_embeds=None, past_key_values_length=0
    ):
        if input_ids is not None:
            input_shape = input_ids.size()
        else:
            input_shape = inputs_embeds.size()[:-1]

        seq_length = input_shape[1]

        if position_ids is None:
            position_ids = self.position_ids[:, past_key_values_length : seq_length + past_key_values_length]

        # Setting the token_type_ids to the registered buffer in constructor where it is all zeros, which usually occurs
        # when its auto-generated, registered buffer helps users when tracing the model without passing token_type_ids, solves
        # issue #5664
        if token_type_ids is None:
            if hasattr(self, "token_type_ids"):
                buffered_token_type_ids = self.token_type_ids[:, :seq_length]
                buffered_token_type_ids_expanded = buffered_token_type_ids.expand(input_shape[0], seq_length)
                token_type_ids = buffered_token_type_ids_expanded
            else:
                token_type_ids = torch.zeros(input_shape, dtype=torch.long, device=self.position_ids.device)

        if inputs_embeds is None:
            inputs_embeds = self.word_embeddings(input_ids)
        token_type_embeddings = self.token_type_embeddings(token_type_ids)

        embeddings = inputs_embeds + token_type_embeddings
        if self.position_embedding_type == "absolute":
            position_embeddings = self.position_embeddings(position_ids)
            embeddings += position_embeddings
        embeddings = self.LayerNorm(embeddings)
        embeddings = self.dropout(embeddings)
        return embeddings


class BertSelfAttention(nn.Module):
    def __init__(self, config):
        super().__init__()
        if config.hidden_size % config.num_attention_heads != 0 and not hasattr(config, "embedding_size"):
            raise ValueError(
                f"The hidden size ({config.hidden_size}) is not a multiple of the number of attention "
                f"heads ({config.num_attention_heads})"
            )

        self.num_attention_heads = config.num_attention_heads
        self.attention_head_size = int(config.hidden_size / config.num_attention_heads)
        self.all_head_size = self.num_attention_heads * self.attention_head_size

        self.query = nn.Linear(config.hidden_size, self.all_head_size)
        self.key = nn.Linear(config.hidden_size, self.all_head_size)
        self.value = nn.Linear(config.hidden_size, self.all_head_size)

        self.dropout = nn.Dropout(config.attention_probs_dropout_prob)
        self.position_embedding_type = getattr(config, "position_embedding_type", "absolute")
        if self.position_embedding_type == "relative_key" or self.position_embedding_type == "relative_key_query":
            self.max_position_embeddings = config.max_position_embeddings
            self.distance_embedding = nn.Embedding(2 * config.max_position_embeddings - 1, self.attention_head_size)

        self.is_decoder = config.is_decoder

    def transpose_for_scores(self, x):
        new_x_shape = x.size()[:-1] + (self.num_attention_heads, self.attention_head_size)
        x = x.view(*new_x_shape)
        return x.permute(0, 2, 1, 3)

    def forward(
        self,
        hidden_states,
        attention_mask=None,
        head_mask=None,
        encoder_hidden_states=None,
        encoder_attention_mask=None,
        past_key_value=None,
        output_attentions=False,
        skim_mask=None,
    ):
        mixed_query_layer = self.query(hidden_states)

        # If this is instantiated as a cross-attention module, the keys
        # and values come from an encoder; the attention mask needs to be
        # such that the encoder's padding tokens are not attended to.
        is_cross_attention = encoder_hidden_states is not None

        if is_cross_attention and past_key_value is not None:
            # reuse k,v, cross_attentions
            key_layer = past_key_value[0]
            value_layer = past_key_value[1]
            attention_mask = encoder_attention_mask
        elif is_cross_attention:
            key_layer = self.transpose_for_scores(self.key(encoder_hidden_states))
            value_layer = self.transpose_for_scores(self.value(encoder_hidden_states))
            attention_mask = encoder_attention_mask
        elif past_key_value is not None:
            key_layer = self.transpose_for_scores(self.key(hidden_states))
            value_layer = self.transpose_for_scores(self.value(hidden_states))
            key_layer = torch.cat([past_key_value[0], key_layer], dim=2)
            value_layer = torch.cat([past_key_value[1], value_layer], dim=2)
        else:
            key_layer = self.transpose_for_scores(self.key(hidden_states))
            value_layer = self.transpose_for_scores(self.value(hidden_states))

        query_layer = self.transpose_for_scores(mixed_query_layer)

        if self.is_decoder:
            # if cross_attention save Tuple(torch.Tensor, torch.Tensor) of all cross attention key/value_states.
            # Further calls to cross_attention layer can then reuse all cross-attention
            # key/value_states (first "if" case)
            # if uni-directional self-attention (decoder) save Tuple(torch.Tensor, torch.Tensor) of
            # all previous decoder key/value_states. Further calls to uni-directional self-attention
            # can concat previous decoder key/value_states to current projected key/value_states (third "elif" case)
            # if encoder bi-directional self-attention `past_key_value` is always `None`
            past_key_value = (key_layer, value_layer)

        # Take the dot product between "query" and "key" to get the raw attention scores.
        attention_scores = torch.matmul(query_layer, key_layer.transpose(-1, -2))

        if self.position_embedding_type == "relative_key" or self.position_embedding_type == "relative_key_query":
            seq_length = hidden_states.size()[1]
            position_ids_l = torch.arange(seq_length, dtype=torch.long, device=hidden_states.device).view(-1, 1)
            position_ids_r = torch.arange(seq_length, dtype=torch.long, device=hidden_states.device).view(1, -1)
            distance = position_ids_l - position_ids_r
            positional_embedding = self.distance_embedding(distance + self.max_position_embeddings - 1)
            positional_embedding = positional_embedding.to(dtype=query_layer.dtype)  # fp16 compatibility

            if self.position_embedding_type == "relative_key":
                relative_position_scores = torch.einsum("bhld,lrd->bhlr", query_layer, positional_embedding)
                attention_scores = attention_scores + relative_position_scores
            elif self.position_embedding_type == "relative_key_query":
                relative_position_scores_query = torch.einsum("bhld,lrd->bhlr", query_layer, positional_embedding)
                relative_position_scores_key = torch.einsum("bhrd,lrd->bhlr", key_layer, positional_embedding)
                attention_scores = attention_scores + relative_position_scores_query + relative_position_scores_key

        attention_scores = attention_scores / math.sqrt(self.attention_head_size)
        if attention_mask is not None:
            # Apply the attention mask is (precomputed for all layers in BertModel forward() function)
            attention_scores = attention_scores + attention_mask

        # Normalize the attention scores to probabilities.
        attention_probs = nn.Softmax(dim=-1)(attention_scores)
        # attention_probs = masked_softmax(attention_scores, skim_mask, dim=3)

        # mask attention probs during training for skimming
        attention_probs = attention_probs * skim_mask[:, None, None, :]

        # This is actually dropping out entire tokens to attend to, which might
        # seem a bit unusual, but is taken from the original Transformer paper.
        attention_probs = self.dropout(attention_probs)

        # Mask heads if we want to
        if head_mask is not None:
            attention_probs = attention_probs * head_mask

        context_layer = torch.matmul(attention_probs, value_layer)

        context_layer = context_layer.permute(0, 2, 1, 3).contiguous()
        new_context_layer_shape = context_layer.size()[:-2] + (self.all_head_size,)
        context_layer = context_layer.view(*new_context_layer_shape)

        outputs = (context_layer, attention_probs) if output_attentions else (context_layer,)

        if self.is_decoder:
            outputs = outputs + (past_key_value,)
        return outputs


class BertSelfOutput(nn.Module):
    def __init__(self, config):
        super().__init__()
        self.dense = nn.Linear(config.hidden_size, config.hidden_size)
        self.LayerNorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
        self.dropout = nn.Dropout(config.hidden_dropout_prob)

    def forward(self, hidden_states, input_tensor):
        hidden_states = self.dense(hidden_states)
        hidden_states = self.dropout(hidden_states)
        hidden_states = self.LayerNorm(hidden_states + input_tensor)
        return hidden_states


class BertAttention(nn.Module):
    def __init__(self, config):
        super().__init__()
        self.self = BertSelfAttention(config)
        self.output = BertSelfOutput(config)
        self.pruned_heads = set()

    def prune_heads(self, heads):
        if len(heads) == 0:
            return
        heads, index = find_pruneable_heads_and_indices(
            heads, self.self.num_attention_heads, self.self.attention_head_size, self.pruned_heads
        )

        # Prune linear layers
        self.self.query = prune_linear_layer(self.self.query, index)
        self.self.key = prune_linear_layer(self.self.key, index)
        self.self.value = prune_linear_layer(self.self.value, index)
        self.output.dense = prune_linear_layer(self.output.dense, index, dim=1)

        # Update hyper params and store pruned heads
        self.self.num_attention_heads = self.self.num_attention_heads - len(heads)
        self.self.all_head_size = self.self.attention_head_size * self.self.num_attention_heads
        self.pruned_heads = self.pruned_heads.union(heads)

    def forward(
        self,
        hidden_states,
        attention_mask=None,
        head_mask=None,
        encoder_hidden_states=None,
        encoder_attention_mask=None,
        past_key_value=None,
        output_attentions=False,
        skim_mask=None,
    ):
        self_outputs = self.self(
            hidden_states,
            attention_mask,
            head_mask,
            encoder_hidden_states,
            encoder_attention_mask,
            past_key_value,
            output_attentions,
            skim_mask,
        )
        attention_output = self.output(self_outputs[0], hidden_states)
        outputs = (attention_output,) + self_outputs[1:]  # add attentions if we output them
        return outputs


class BertIntermediate(nn.Module):
    def __init__(self, config):
        super().__init__()
        self.dense = nn.Linear(config.hidden_size, config.intermediate_size)
        if isinstance(config.hidden_act, str):
            self.intermediate_act_fn = ACT2FN[config.hidden_act]
        else:
            self.intermediate_act_fn = config.hidden_act

    def forward(self, hidden_states):
        hidden_states = self.dense(hidden_states)
        hidden_states = self.intermediate_act_fn(hidden_states)
        return hidden_states


class BertOutput(nn.Module):
    def __init__(self, config):
        super().__init__()
        self.dense = nn.Linear(config.intermediate_size, config.hidden_size)
        self.LayerNorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
        self.dropout = nn.Dropout(config.hidden_dropout_prob)

    def forward(self, hidden_states, input_tensor):
        hidden_states = self.dense(hidden_states)
        hidden_states = self.dropout(hidden_states)
        hidden_states = self.LayerNorm(hidden_states + input_tensor)
        return hidden_states


class BertLayer(nn.Module):
    def __init__(self, config):
        super().__init__()
        self.chunk_size_feed_forward = config.chunk_size_feed_forward
        self.seq_len_dim = 1
        self.attention = BertAttention(config)
        self.is_decoder = config.is_decoder
        self.add_cross_attention = config.add_cross_attention
        if self.add_cross_attention:
            assert self.is_decoder, f"{self} should be used as a decoder model if cross attention is added"
            self.crossattention = BertAttention(config)
        self.intermediate = BertIntermediate(config)
        self.output = BertOutput(config)

    def forward(
        self,
        hidden_states,
        attention_mask=None,
        head_mask=None,
        encoder_hidden_states=None,
        encoder_attention_mask=None,
        past_key_value=None,
        output_attentions=False,
        skim_mask=None,
    ):
        # decoder uni-directional self-attention cached key/values tuple is at positions 1,2
        self_attn_past_key_value = past_key_value[:2] if past_key_value is not None else None
        self_attention_outputs = self.attention(
            hidden_states,
            attention_mask,
            head_mask,
            output_attentions=output_attentions,
            past_key_value=self_attn_past_key_value,
            skim_mask=skim_mask,
        )
        attention_output = self_attention_outputs[0]

        # if decoder, the last output is tuple of self-attn cache
        if self.is_decoder:
            outputs = self_attention_outputs[1:-1]
            present_key_value = self_attention_outputs[-1]
        else:
            outputs = self_attention_outputs[1:]  # add self attentions if we output attention weights

        cross_attn_present_key_value = None
        if self.is_decoder and encoder_hidden_states is not None:
            assert hasattr(
                self, "crossattention"
            ), f"If `encoder_hidden_states` are passed, {self} has to be instantiated with cross-attention layers by setting `config.add_cross_attention=True`"

            # cross_attn cached key/values tuple is at positions 3,4 of past_key_value tuple
            cross_attn_past_key_value = past_key_value[-2:] if past_key_value is not None else None
            cross_attention_outputs = self.crossattention(
                attention_output,
                attention_mask,
                head_mask,
                encoder_hidden_states,
                encoder_attention_mask,
                cross_attn_past_key_value,
                output_attentions,
            )
            attention_output = cross_attention_outputs[0]
            outputs = outputs + cross_attention_outputs[1:-1]  # add cross attentions if we output attention weights

            # add cross-attn cache to positions 3,4 of present_key_value tuple
            cross_attn_present_key_value = cross_attention_outputs[-1]
            present_key_value = present_key_value + cross_attn_present_key_value

        layer_output = apply_chunking_to_forward(
            self.feed_forward_chunk, self.chunk_size_feed_forward, self.seq_len_dim, attention_output
        )
        outputs = (layer_output,) + outputs

        # if decoder, return the attn key/values as the last output
        if self.is_decoder:
            outputs = outputs + (present_key_value,)

        return outputs

    def feed_forward_chunk(self, attention_output):
        intermediate_output = self.intermediate(attention_output)
        layer_output = self.output(intermediate_output, attention_output)
        return layer_output


class BertEncoder(nn.Module):
    def __init__(self, config):
        super().__init__()
        self.config = config
        self.layer = nn.ModuleList([BertLayer(config) for _ in range(config.num_hidden_layers)])

        # skim predictors for each layer
        self.skim_predictors = nn.ModuleList([SkimPredictor(config.hidden_size, 2) for _ in range(config.num_hidden_layers)])
        # init_skim_predictor(self.skim_predictors)

    def forward(
        self,
        hidden_states,
        attention_mask=None,
        head_mask=None,
        encoder_hidden_states=None,
        encoder_attention_mask=None,
        past_key_values=None,
        use_cache=None,
        output_attentions=False,
        output_hidden_states=False,
        return_dict=True,
    ):
        all_hidden_states = () if output_hidden_states else None
        all_self_attentions = () if output_attentions else None
        all_cross_attentions = () if output_attentions and self.config.add_cross_attention else None
        all_skim_mask = ()

        next_decoder_cache = () if use_cache else None

        forward_hidden_states = hidden_states.clone()
        forward_skim_mask = None


        for i, layer_module in enumerate(self.layer):
            if output_hidden_states:
                all_hidden_states = all_hidden_states + (hidden_states,)
            
            # if gumbel_softmax:
            #     # print('gradient')
            #     skim_mask = nn.functional.gumbel_softmax(self.skim_predictors[i](hidden_states[:,1:,:]), hard=True, tau=1)
            # else:
                # print('not gradient')
            logits = nn.functional.softmax(self.skim_predictors[i](hidden_states[:,1:,:]),dim=-1) 
                # print(logits)
            index = logits.max(dim=-1, keepdim=True)[1]
                # print(index)
            skim_mask = torch.zeros_like(logits, memory_format=torch.legacy_contiguous_format).scatter_(-1, index, 1.0)
                # print(skim_mask)
                
            skim_mask = skim_mask[:,:,1]
            skim_mask_with_cls = torch.ones(skim_mask.shape[0], skim_mask.shape[1]+1, device=skim_mask.device)
            skim_mask_with_cls[:,1:] = skim_mask
            skim_mask = skim_mask_with_cls
            # multiple current layer skim mask with last layer skim mask
            # to gurantee skimmed tokens are never recovered
            if all_skim_mask and hidden_states.shape[0] != 1:
                skim_mask = skim_mask * all_skim_mask[-1]
            all_skim_mask += (skim_mask, )

            # 最大的一个不同之处：就是这个trunc掉了
            if hidden_states.shape[0] == 1:
                bool_skim_mask = skim_mask.to(dtype=torch.bool)
                hidden_states = trunc_with_mask_batched(hidden_states, bool_skim_mask, 1)
                attention_mask = trunc_with_mask_batched(attention_mask, bool_skim_mask, 3)
                skim_mask = trunc_with_mask_batched(skim_mask, bool_skim_mask, 1)
                if forward_skim_mask is None:
                    forward_skim_mask = torch.ones_like(bool_skim_mask).to(dtype=torch.bool)

            layer_head_mask = head_mask[i] if head_mask is not None else None
            past_key_value = past_key_values[i] if past_key_values is not None else None

            if getattr(self.config, "gradient_checkpointing", False) and self.training:

                if use_cache:
                    logger.warning(
                        "`use_cache=True` is incompatible with `config.gradient_checkpointing=True`. Setting "
                        "`use_cache=False`..."
                    )
                    use_cache = False

                def create_custom_forward(module):
                    def custom_forward(*inputs):
                        return module(*inputs, past_key_value, output_attentions)

                    return custom_forward

                layer_outputs = torch.utils.checkpoint.checkpoint(
                    create_custom_forward(layer_module),
                    hidden_states,
                    attention_mask,
                    layer_head_mask,
                    encoder_hidden_states,
                    encoder_attention_mask,
                )
            else:
                layer_outputs = layer_module(
                    hidden_states,
                    attention_mask,
                    layer_head_mask,
                    encoder_hidden_states,
                    encoder_attention_mask,
                    past_key_value,
                    output_attentions,
                    skim_mask,
                )

            hidden_states = layer_outputs[0]
            # print(hidden_states.shape)
            if hidden_states.shape[0] == 1:
                forward_skim_mask[forward_skim_mask.clone()] = bool_skim_mask
                forward_hidden_states[forward_skim_mask] = hidden_states
            else:
                forward_hidden_states = forward_hidden_states * (1-skim_mask.view(*skim_mask.shape,1)) + hidden_states * skim_mask.view(*skim_mask.shape,1)

            if use_cache:
                next_decoder_cache += (layer_outputs[-1],)
            if output_attentions:
                all_self_attentions = all_self_attentions + (layer_outputs[1],)
                if self.config.add_cross_attention:
                    all_cross_attentions = all_cross_attentions + (layer_outputs[2],)

        if output_hidden_states:
            all_hidden_states = all_hidden_states + (hidden_states,)


        if not return_dict:
            return tuple(
                v
                for v in [
                    forward_hidden_states,
                    next_decoder_cache,
                    all_hidden_states,
                    all_self_attentions,
                    all_cross_attentions,
                ]
                if v is not None
            )
        return BaseModelOutputWithPastAndCrossAttentionsSkim(
            last_hidden_state=forward_hidden_states,
            past_key_values=next_decoder_cache,
            hidden_states=all_hidden_states,
            attentions=all_self_attentions,
            cross_attentions=all_cross_attentions,
            attention_mask=attention_mask,
            skim_mask=all_skim_mask,
        )


class BertPooler(nn.Module):
    def __init__(self, config):
        super().__init__()
        self.dense = nn.Linear(config.hidden_size, config.hidden_size)
        self.activation = nn.Tanh()

    def forward(self, hidden_states):
        # We "pool" the model by simply taking the hidden state corresponding
        # to the first token.
        first_token_tensor = hidden_states[:, 0]
        pooled_output = self.dense(first_token_tensor)
        pooled_output = self.activation(pooled_output)
        return pooled_output


class BertPredictionHeadTransform(nn.Module):
    def __init__(self, config):
        super().__init__()
        self.dense = nn.Linear(config.hidden_size, config.hidden_size)
        if isinstance(config.hidden_act, str):
            self.transform_act_fn = ACT2FN[config.hidden_act]
        else:
            self.transform_act_fn = config.hidden_act
        self.LayerNorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)

    def forward(self, hidden_states):
        hidden_states = self.dense(hidden_states)
        hidden_states = self.transform_act_fn(hidden_states)
        hidden_states = self.LayerNorm(hidden_states)
        return hidden_states


class BertLMPredictionHead(nn.Module):
    def __init__(self, config):
        super().__init__()
        self.transform = BertPredictionHeadTransform(config)

        # The output weights are the same as the input embeddings, but there is
        # an output-only bias for each token.
        self.decoder = nn.Linear(config.hidden_size, config.vocab_size, bias=False)

        self.bias = nn.Parameter(torch.zeros(config.vocab_size))

        # Need a link between the two variables so that the bias is correctly resized with `resize_token_embeddings`
        self.decoder.bias = self.bias

    def forward(self, hidden_states):
        hidden_states = self.transform(hidden_states)
        hidden_states = self.decoder(hidden_states)
        return hidden_states


class BertOnlyMLMHead(nn.Module):
    def __init__(self, config):
        super().__init__()
        self.predictions = BertLMPredictionHead(config)

    def forward(self, sequence_output):
        prediction_scores = self.predictions(sequence_output)
        return prediction_scores


class BertOnlyNSPHead(nn.Module):
    def __init__(self, config):
        super().__init__()
        self.seq_relationship = nn.Linear(config.hidden_size, 2)

    def forward(self, pooled_output):
        seq_relationship_score = self.seq_relationship(pooled_output)
        return seq_relationship_score


class BertPreTrainingHeads(nn.Module):
    def __init__(self, config):
        super().__init__()
        self.predictions = BertLMPredictionHead(config)
        self.seq_relationship = nn.Linear(config.hidden_size, 2)

    def forward(self, sequence_output, pooled_output):
        prediction_scores = self.predictions(sequence_output)
        seq_relationship_score = self.seq_relationship(pooled_output)
        return prediction_scores, seq_relationship_score


class BertPreTrainedModel(PreTrainedModel):
    """
    An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained
    models.
    """

    config_class = BertConfig
    load_tf_weights = load_tf_weights_in_bert
    base_model_prefix = "bert"
    _keys_to_ignore_on_load_missing = [r"position_ids"]

    def _init_weights(self, module):
        """Initialize the weights"""
        if hasattr(module, '_skim_initialized') and module._skim_initialized:
            return
        if isinstance(module, nn.Linear):
            # Slightly different from the TF version which uses truncated_normal for initialization
            # cf https://github.com/pytorch/pytorch/pull/5617
            module.weight.data.normal_(mean=0.0, std=self.config.initializer_range)
            if module.bias is not None:
                module.bias.data.zero_()
        elif isinstance(module, nn.Embedding):
            module.weight.data.normal_(mean=0.0, std=self.config.initializer_range)
            if module.padding_idx is not None:
                module.weight.data[module.padding_idx].zero_()
        elif isinstance(module, nn.LayerNorm):
            module.bias.data.zero_()
            module.weight.data.fill_(1.0)


@dataclass
class BertForPreTrainingOutput(ModelOutput):
    """
    Output type of :class:`~transformers.BertForPreTraining`.

    Args:
        loss (`optional`, returned when ``labels`` is provided, ``torch.FloatTensor`` of shape :obj:`(1,)`):
            Total loss as the sum of the masked language modeling loss and the next sequence prediction
            (classification) loss.
        prediction_logits (:obj:`torch.FloatTensor` of shape :obj:`(batch_size, sequence_length, config.vocab_size)`):
            Prediction scores of the language modeling head (scores for each vocabulary token before SoftMax).
        seq_relationship_logits (:obj:`torch.FloatTensor` of shape :obj:`(batch_size, 2)`):
            Prediction scores of the next sequence prediction (classification) head (scores of True/False continuation
            before SoftMax).
        hidden_states (:obj:`tuple(torch.FloatTensor)`, `optional`, returned when ``output_hidden_states=True`` is passed or when ``config.output_hidden_states=True``):
            Tuple of :obj:`torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer)
            of shape :obj:`(batch_size, sequence_length, hidden_size)`.

            Hidden-states of the model at the output of each layer plus the initial embedding outputs.
        attentions (:obj:`tuple(torch.FloatTensor)`, `optional`, returned when ``output_attentions=True`` is passed or when ``config.output_attentions=True``):
            Tuple of :obj:`torch.FloatTensor` (one for each layer) of shape :obj:`(batch_size, num_heads,
            sequence_length, sequence_length)`.

            Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
            heads.
    """

    loss: Optional[torch.FloatTensor] = None
    prediction_logits: torch.FloatTensor = None
    seq_relationship_logits: torch.FloatTensor = None
    hidden_states: Optional[Tuple[torch.FloatTensor]] = None
    attentions: Optional[Tuple[torch.FloatTensor]] = None


BERT_START_DOCSTRING = r"""

    This model inherits from :class:`~transformers.PreTrainedModel`. Check the superclass documentation for the generic
    methods the library implements for all its model (such as downloading or saving, resizing the input embeddings,
    pruning heads etc.)

    This model is also a PyTorch `torch.nn.Module <https://pytorch.org/docs/stable/nn.html#torch.nn.Module>`__
    subclass. Use it as a regular PyTorch Module and refer to the PyTorch documentation for all matter related to
    general usage and behavior.

    Parameters:
        config (:class:`~transformers.BertConfig`): Model configuration class with all the parameters of the model.
            Initializing with a config file does not load the weights associated with the model, only the
            configuration. Check out the :meth:`~transformers.PreTrainedModel.from_pretrained` method to load the model
            weights.
"""

BERT_INPUTS_DOCSTRING = r"""
    Args:
        input_ids (:obj:`torch.LongTensor` of shape :obj:`({0})`):
            Indices of input sequence tokens in the vocabulary.

            Indices can be obtained using :class:`~transformers.BertTokenizer`. See
            :meth:`transformers.PreTrainedTokenizer.encode` and :meth:`transformers.PreTrainedTokenizer.__call__` for
            details.

            `What are input IDs? <../glossary.html#input-ids>`__
        attention_mask (:obj:`torch.FloatTensor` of shape :obj:`({0})`, `optional`):
            Mask to avoid performing attention on padding token indices. Mask values selected in ``[0, 1]``:

            - 1 for tokens that are **not masked**,
            - 0 for tokens that are **masked**.

            `What are attention masks? <../glossary.html#attention-mask>`__
        token_type_ids (:obj:`torch.LongTensor` of shape :obj:`({0})`, `optional`):
            Segment token indices to indicate first and second portions of the inputs. Indices are selected in ``[0,
            1]``:

            - 0 corresponds to a `sentence A` token,
            - 1 corresponds to a `sentence B` token.

            `What are token type IDs? <../glossary.html#token-type-ids>`_
        position_ids (:obj:`torch.LongTensor` of shape :obj:`({0})`, `optional`):
            Indices of positions of each input sequence tokens in the position embeddings. Selected in the range ``[0,
            config.max_position_embeddings - 1]``.

            `What are position IDs? <../glossary.html#position-ids>`_
        head_mask (:obj:`torch.FloatTensor` of shape :obj:`(num_heads,)` or :obj:`(num_layers, num_heads)`, `optional`):
            Mask to nullify selected heads of the self-attention modules. Mask values selected in ``[0, 1]``:

            - 1 indicates the head is **not masked**,
            - 0 indicates the head is **masked**.

        inputs_embeds (:obj:`torch.FloatTensor` of shape :obj:`({0}, hidden_size)`, `optional`):
            Optionally, instead of passing :obj:`input_ids` you can choose to directly pass an embedded representation.
            This is useful if you want more control over how to convert :obj:`input_ids` indices into associated
            vectors than the model's internal embedding lookup matrix.
        output_attentions (:obj:`bool`, `optional`):
            Whether or not to return the attentions tensors of all attention layers. See ``attentions`` under returned
            tensors for more detail.
        output_hidden_states (:obj:`bool`, `optional`):
            Whether or not to return the hidden states of all layers. See ``hidden_states`` under returned tensors for
            more detail.
        return_dict (:obj:`bool`, `optional`):
            Whether or not to return a :class:`~transformers.file_utils.ModelOutput` instead of a plain tuple.
"""


@add_start_docstrings(
    "The bare Bert Model transformer outputting raw hidden-states without any specific head on top.",
    BERT_START_DOCSTRING,
)
class BertModel(BertPreTrainedModel):
    """

    The model can behave as an encoder (with only self-attention) as well as a decoder, in which case a layer of
    cross-attention is added between the self-attention layers, following the architecture described in `Attention is
    all you need <https://arxiv.org/abs/1706.03762>`__ by Ashish Vaswani, Noam Shazeer, Niki Parmar, Jakob Uszkoreit,
    Llion Jones, Aidan N. Gomez, Lukasz Kaiser and Illia Polosukhin.

    To behave as an decoder the model needs to be initialized with the :obj:`is_decoder` argument of the configuration
    set to :obj:`True`. To be used in a Seq2Seq model, the model needs to initialized with both :obj:`is_decoder`
    argument and :obj:`add_cross_attention` set to :obj:`True`; an :obj:`encoder_hidden_states` is then expected as an
    input to the forward pass.
    """

    def __init__(self, config, add_pooling_layer=True):
        super().__init__(config)
        self.config = config

        self.embeddings = BertEmbeddings(config)
        self.encoder = BertEncoder(config)

        self.pooler = BertPooler(config) if add_pooling_layer else None

        self.init_weights()

    def get_input_embeddings(self):
        return self.embeddings.word_embeddings

    def set_input_embeddings(self, value):
        self.embeddings.word_embeddings = value

    def _prune_heads(self, heads_to_prune):
        """
        Prunes heads of the model. heads_to_prune: dict of {layer_num: list of heads to prune in this layer} See base
        class PreTrainedModel
        """
        for layer, heads in heads_to_prune.items():
            self.encoder.layer[layer].attention.prune_heads(heads)

    @add_start_docstrings_to_model_forward(BERT_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
    @add_code_sample_docstrings(
        processor_class=_TOKENIZER_FOR_DOC,
        checkpoint=_CHECKPOINT_FOR_DOC,
        output_type=BaseModelOutputWithPoolingAndCrossAttentions,
        config_class=_CONFIG_FOR_DOC,
    )
    def forward(
        self,
        input_ids=None,
        attention_mask=None,
        token_type_ids=None,
        position_ids=None,
        head_mask=None,
        inputs_embeds=None,
        encoder_hidden_states=None,
        encoder_attention_mask=None,
        past_key_values=None,
        use_cache=None,
        output_attentions=None,
        output_hidden_states=None,
        return_dict=None,
    ):
        r"""
        encoder_hidden_states  (:obj:`torch.FloatTensor` of shape :obj:`(batch_size, sequence_length, hidden_size)`, `optional`):
            Sequence of hidden-states at the output of the last layer of the encoder. Used in the cross-attention if
            the model is configured as a decoder.
        encoder_attention_mask (:obj:`torch.FloatTensor` of shape :obj:`(batch_size, sequence_length)`, `optional`):
            Mask to avoid performing attention on the padding token indices of the encoder input. This mask is used in
            the cross-attention if the model is configured as a decoder. Mask values selected in ``[0, 1]``:

            - 1 for tokens that are **not masked**,
            - 0 for tokens that are **masked**.
        past_key_values (:obj:`tuple(tuple(torch.FloatTensor))` of length :obj:`config.n_layers` with each tuple having 4 tensors of shape :obj:`(batch_size, num_heads, sequence_length - 1, embed_size_per_head)`):
            Contains precomputed key and value hidden states of the attention blocks. Can be used to speed up decoding.

            If :obj:`past_key_values` are used, the user can optionally input only the last :obj:`decoder_input_ids`
            (those that don't have their past key value states given to this model) of shape :obj:`(batch_size, 1)`
            instead of all :obj:`decoder_input_ids` of shape :obj:`(batch_size, sequence_length)`.
        use_cache (:obj:`bool`, `optional`):
            If set to :obj:`True`, :obj:`past_key_values` key value states are returned and can be used to speed up
            decoding (see :obj:`past_key_values`).
        """
        output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
        output_hidden_states = (
            output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
        )
        return_dict = return_dict if return_dict is not None else self.config.use_return_dict

        if self.config.is_decoder:
            use_cache = use_cache if use_cache is not None else self.config.use_cache
        else:
            use_cache = False
        if input_ids is not None and inputs_embeds is not None:
            raise ValueError("You cannot specify both input_ids and inputs_embeds at the same time")
        elif input_ids is not None:
            input_shape = input_ids.size()
        elif inputs_embeds is not None:
            input_shape = inputs_embeds.size()[:-1]
        else:
            raise ValueError("You have to specify either input_ids or inputs_embeds")

        batch_size, seq_length = input_shape
        device = input_ids.device if input_ids is not None else inputs_embeds.device

        # past_key_values_length
        past_key_values_length = past_key_values[0][0].shape[2] if past_key_values is not None else 0

        if attention_mask is None:
            attention_mask = torch.ones(((batch_size, seq_length + past_key_values_length)), device=device)

        if token_type_ids is None:
            if hasattr(self.embeddings, "token_type_ids"):
                buffered_token_type_ids = self.embeddings.token_type_ids[:, :seq_length]
                buffered_token_type_ids_expanded = buffered_token_type_ids.expand(batch_size, seq_length)
                token_type_ids = buffered_token_type_ids_expanded
            else:
                token_type_ids = torch.zeros(input_shape, dtype=torch.long, device=device)

        # We can provide a self-attention mask of dimensions [batch_size, from_seq_length, to_seq_length]
        # ourselves in which case we just need to make it broadcastable to all heads.
        extended_attention_mask: torch.Tensor = self.get_extended_attention_mask(attention_mask, input_shape, device)

        # If a 2D or 3D attention mask is provided for the cross-attention
        # we need to make broadcastable to [batch_size, num_heads, seq_length, seq_length]
        if self.config.is_decoder and encoder_hidden_states is not None:
            encoder_batch_size, encoder_sequence_length, _ = encoder_hidden_states.size()
            encoder_hidden_shape = (encoder_batch_size, encoder_sequence_length)
            if encoder_attention_mask is None:
                encoder_attention_mask = torch.ones(encoder_hidden_shape, device=device)
            encoder_extended_attention_mask = self.invert_attention_mask(encoder_attention_mask)
        else:
            encoder_extended_attention_mask = None

        # Prepare head mask if needed
        # 1.0 in head_mask indicate we keep the head
        # attention_probs has shape bsz x n_heads x N x N
        # input head_mask has shape [num_heads] or [num_hidden_layers x num_heads]
        # and head_mask is converted to shape [num_hidden_layers x batch x num_heads x seq_length x seq_length]
        head_mask = self.get_head_mask(head_mask, self.config.num_hidden_layers)

        embedding_output = self.embeddings(
            input_ids=input_ids,
            position_ids=position_ids,
            token_type_ids=token_type_ids,
            inputs_embeds=inputs_embeds,
            past_key_values_length=past_key_values_length,
        )
        encoder_outputs = self.encoder(
            embedding_output,
            attention_mask=extended_attention_mask,
            head_mask=head_mask,
            encoder_hidden_states=encoder_hidden_states,
            encoder_attention_mask=encoder_extended_attention_mask,
            past_key_values=past_key_values,
            use_cache=use_cache,
            output_attentions=output_attentions,
            output_hidden_states=output_hidden_states,
            return_dict=return_dict,
        )
        sequence_output = encoder_outputs[0]
        pooled_output = self.pooler(sequence_output) if self.pooler is not None else None

        if not return_dict:
            return (sequence_output, pooled_output) + encoder_outputs[1:]

        return BaseModelOutputWithPoolingAndCrossAttentionsSkim(
            last_hidden_state=sequence_output,
            pooler_output=pooled_output,
            past_key_values=encoder_outputs.past_key_values,
            hidden_states=encoder_outputs.hidden_states,
            attentions=encoder_outputs.attentions,
            cross_attentions=encoder_outputs.cross_attentions,
            attention_mask=encoder_outputs.attention_mask,
            skim_mask=encoder_outputs.skim_mask,
        )


@add_start_docstrings(
    """
    Bert Model with two heads on top as done during the pretraining: a `masked language modeling` head and a `next
    sentence prediction (classification)` head.
    """,
    BERT_START_DOCSTRING,
)
class BertForPreTraining(BertPreTrainedModel):
    def __init__(self, config):
        super().__init__(config)

        self.bert = BertModel(config)
        self.cls = BertPreTrainingHeads(config)

        self.init_weights()

    def get_output_embeddings(self):
        return self.cls.predictions.decoder

    def set_output_embeddings(self, new_embeddings):
        self.cls.predictions.decoder = new_embeddings

    @add_start_docstrings_to_model_forward(BERT_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
    @replace_return_docstrings(output_type=BertForPreTrainingOutput, config_class=_CONFIG_FOR_DOC)
    def forward(
        self,
        input_ids=None,
        attention_mask=None,
        token_type_ids=None,
        position_ids=None,
        head_mask=None,
        inputs_embeds=None,
        labels=None,
        next_sentence_label=None,
        output_attentions=None,
        output_hidden_states=None,
        return_dict=None,
    ):
        r"""
        labels (:obj:`torch.LongTensor` of shape ``(batch_size, sequence_length)``, `optional`):
            Labels for computing the masked language modeling loss. Indices should be in ``[-100, 0, ...,
            config.vocab_size]`` (see ``input_ids`` docstring) Tokens with indices set to ``-100`` are ignored
            (masked), the loss is only computed for the tokens with labels in ``[0, ..., config.vocab_size]``
        next_sentence_label (``torch.LongTensor`` of shape ``(batch_size,)``, `optional`):
            Labels for computing the next sequence prediction (classification) loss. Input should be a sequence pair
            (see :obj:`input_ids` docstring) Indices should be in ``[0, 1]``:

            - 0 indicates sequence B is a continuation of sequence A,
            - 1 indicates sequence B is a random sequence.
        kwargs (:obj:`Dict[str, any]`, optional, defaults to `{}`):
            Used to hide legacy arguments that have been deprecated.

        Returns:

        Example::

            >>> from transformers import BertTokenizer, BertForPreTraining
            >>> import torch

            >>> tokenizer = BertTokenizer.from_pretrained('bert-base-uncased')
            >>> model = BertForPreTraining.from_pretrained('bert-base-uncased')

            >>> inputs = tokenizer("Hello, my dog is cute", return_tensors="pt")
            >>> outputs = model(**inputs)

            >>> prediction_logits = outputs.prediction_logits
            >>> seq_relationship_logits = outputs.seq_relationship_logits
        """
        return_dict = return_dict if return_dict is not None else self.config.use_return_dict

        outputs = self.bert(
            input_ids,
            attention_mask=attention_mask,
            token_type_ids=token_type_ids,
            position_ids=position_ids,
            head_mask=head_mask,
            inputs_embeds=inputs_embeds,
            output_attentions=output_attentions,
            output_hidden_states=output_hidden_states,
            return_dict=return_dict,
        )

        sequence_output, pooled_output = outputs[:2]
        prediction_scores, seq_relationship_score = self.cls(sequence_output, pooled_output)

        total_loss = None
        if labels is not None and next_sentence_label is not None:
            loss_fct = CrossEntropyLoss()
            masked_lm_loss = loss_fct(prediction_scores.view(-1, self.config.vocab_size), labels.view(-1))
            next_sentence_loss = loss_fct(seq_relationship_score.view(-1, 2), next_sentence_label.view(-1))
            total_loss = masked_lm_loss + next_sentence_loss

        if not return_dict:
            output = (prediction_scores, seq_relationship_score) + outputs[2:]
            return ((total_loss,) + output) if total_loss is not None else output

        return BertForPreTrainingOutput(
            loss=total_loss,
            prediction_logits=prediction_scores,
            seq_relationship_logits=seq_relationship_score,
            hidden_states=outputs.hidden_states,
            attentions=outputs.attentions,
        )


@add_start_docstrings(
    """Bert Model with a `language modeling` head on top for CLM fine-tuning. """, BERT_START_DOCSTRING
)
class BertLMHeadModel(BertPreTrainedModel):

    _keys_to_ignore_on_load_unexpected = [r"pooler"]
    _keys_to_ignore_on_load_missing = [r"position_ids", r"predictions.decoder.bias"]

    def __init__(self, config):
        super().__init__(config)

        if not config.is_decoder:
            logger.warning("If you want to use `BertLMHeadModel` as a standalone, add `is_decoder=True.`")

        self.bert = BertModel(config, add_pooling_layer=False)
        self.cls = BertOnlyMLMHead(config)

        self.init_weights()

    def get_output_embeddings(self):
        return self.cls.predictions.decoder

    def set_output_embeddings(self, new_embeddings):
        self.cls.predictions.decoder = new_embeddings

    @add_start_docstrings_to_model_forward(BERT_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
    @replace_return_docstrings(output_type=CausalLMOutputWithCrossAttentions, config_class=_CONFIG_FOR_DOC)
    def forward(
        self,
        input_ids=None,
        attention_mask=None,
        token_type_ids=None,
        position_ids=None,
        head_mask=None,
        inputs_embeds=None,
        encoder_hidden_states=None,
        encoder_attention_mask=None,
        labels=None,
        past_key_values=None,
        use_cache=None,
        output_attentions=None,
        output_hidden_states=None,
        return_dict=None,
    ):
        r"""
        encoder_hidden_states  (:obj:`torch.FloatTensor` of shape :obj:`(batch_size, sequence_length, hidden_size)`, `optional`):
            Sequence of hidden-states at the output of the last layer of the encoder. Used in the cross-attention if
            the model is configured as a decoder.
        encoder_attention_mask (:obj:`torch.FloatTensor` of shape :obj:`(batch_size, sequence_length)`, `optional`):
            Mask to avoid performing attention on the padding token indices of the encoder input. This mask is used in
            the cross-attention if the model is configured as a decoder. Mask values selected in ``[0, 1]``:

            - 1 for tokens that are **not masked**,
            - 0 for tokens that are **masked**.
        labels (:obj:`torch.LongTensor` of shape :obj:`(batch_size, sequence_length)`, `optional`):
            Labels for computing the left-to-right language modeling loss (next word prediction). Indices should be in
            ``[-100, 0, ..., config.vocab_size]`` (see ``input_ids`` docstring) Tokens with indices set to ``-100`` are
            ignored (masked), the loss is only computed for the tokens with labels n ``[0, ..., config.vocab_size]``
        past_key_values (:obj:`tuple(tuple(torch.FloatTensor))` of length :obj:`config.n_layers` with each tuple having 4 tensors of shape :obj:`(batch_size, num_heads, sequence_length - 1, embed_size_per_head)`):
            Contains precomputed key and value hidden states of the attention blocks. Can be used to speed up decoding.

            If :obj:`past_key_values` are used, the user can optionally input only the last :obj:`decoder_input_ids`
            (those that don't have their past key value states given to this model) of shape :obj:`(batch_size, 1)`
            instead of all :obj:`decoder_input_ids` of shape :obj:`(batch_size, sequence_length)`.
        use_cache (:obj:`bool`, `optional`):
            If set to :obj:`True`, :obj:`past_key_values` key value states are returned and can be used to speed up
            decoding (see :obj:`past_key_values`).

        Returns:

        Example::

            >>> from transformers import BertTokenizer, BertLMHeadModel, BertConfig
            >>> import torch

            >>> tokenizer = BertTokenizer.from_pretrained('bert-base-cased')
            >>> config = BertConfig.from_pretrained("bert-base-cased")
            >>> config.is_decoder = True
            >>> model = BertLMHeadModel.from_pretrained('bert-base-cased', config=config)

            >>> inputs = tokenizer("Hello, my dog is cute", return_tensors="pt")
            >>> outputs = model(**inputs)

            >>> prediction_logits = outputs.logits
        """
        return_dict = return_dict if return_dict is not None else self.config.use_return_dict
        if labels is not None:
            use_cache = False

        outputs = self.bert(
            input_ids,
            attention_mask=attention_mask,
            token_type_ids=token_type_ids,
            position_ids=position_ids,
            head_mask=head_mask,
            inputs_embeds=inputs_embeds,
            encoder_hidden_states=encoder_hidden_states,
            encoder_attention_mask=encoder_attention_mask,
            past_key_values=past_key_values,
            use_cache=use_cache,
            output_attentions=output_attentions,
            output_hidden_states=output_hidden_states,
            return_dict=return_dict,
        )

        sequence_output = outputs[0]
        prediction_scores = self.cls(sequence_output)

        lm_loss = None
        if labels is not None:
            # we are doing next-token prediction; shift prediction scores and input ids by one
            shifted_prediction_scores = prediction_scores[:, :-1, :].contiguous()
            labels = labels[:, 1:].contiguous()
            loss_fct = CrossEntropyLoss()
            lm_loss = loss_fct(shifted_prediction_scores.view(-1, self.config.vocab_size), labels.view(-1))

        if not return_dict:
            output = (prediction_scores,) + outputs[2:]
            return ((lm_loss,) + output) if lm_loss is not None else output

        return CausalLMOutputWithCrossAttentions(
            loss=lm_loss,
            logits=prediction_scores,
            past_key_values=outputs.past_key_values,
            hidden_states=outputs.hidden_states,
            attentions=outputs.attentions,
            cross_attentions=outputs.cross_attentions,
        )

    def prepare_inputs_for_generation(self, input_ids, past=None, attention_mask=None, **model_kwargs):
        input_shape = input_ids.shape
        # if model is used as a decoder in encoder-decoder model, the decoder attention mask is created on the fly
        if attention_mask is None:
            attention_mask = input_ids.new_ones(input_shape)

        # cut decoder_input_ids if past is used
        if past is not None:
            input_ids = input_ids[:, -1:]

        return {"input_ids": input_ids, "attention_mask": attention_mask, "past_key_values": past}

    def _reorder_cache(self, past, beam_idx):
        reordered_past = ()
        for layer_past in past:
            reordered_past += (tuple(past_state.index_select(0, beam_idx) for past_state in layer_past),)
        return reordered_past


@add_start_docstrings("""Bert Model with a `language modeling` head on top. """, BERT_START_DOCSTRING)
class BertForMaskedLM(BertPreTrainedModel):

    _keys_to_ignore_on_load_unexpected = [r"pooler"]
    _keys_to_ignore_on_load_missing = [r"position_ids", r"predictions.decoder.bias"]

    def __init__(self, config):
        super().__init__(config)

        if config.is_decoder:
            logger.warning(
                "If you want to use `BertForMaskedLM` make sure `config.is_decoder=False` for "
                "bi-directional self-attention."
            )

        self.bert = BertModel(config, add_pooling_layer=False)
        self.cls = BertOnlyMLMHead(config)

        self.init_weights()

    def get_output_embeddings(self):
        return self.cls.predictions.decoder

    def set_output_embeddings(self, new_embeddings):
        self.cls.predictions.decoder = new_embeddings

    @add_start_docstrings_to_model_forward(BERT_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
    @add_code_sample_docstrings(
        processor_class=_TOKENIZER_FOR_DOC,
        checkpoint=_CHECKPOINT_FOR_DOC,
        output_type=MaskedLMOutput,
        config_class=_CONFIG_FOR_DOC,
    )
    def forward(
        self,
        input_ids=None,
        attention_mask=None,
        token_type_ids=None,
        position_ids=None,
        head_mask=None,
        inputs_embeds=None,
        encoder_hidden_states=None,
        encoder_attention_mask=None,
        labels=None,
        output_attentions=None,
        output_hidden_states=None,
        return_dict=None,
    ):
        r"""
        labels (:obj:`torch.LongTensor` of shape :obj:`(batch_size, sequence_length)`, `optional`):
            Labels for computing the masked language modeling loss. Indices should be in ``[-100, 0, ...,
            config.vocab_size]`` (see ``input_ids`` docstring) Tokens with indices set to ``-100`` are ignored
            (masked), the loss is only computed for the tokens with labels in ``[0, ..., config.vocab_size]``
        """

        return_dict = return_dict if return_dict is not None else self.config.use_return_dict

        outputs = self.bert(
            input_ids,
            attention_mask=attention_mask,
            token_type_ids=token_type_ids,
            position_ids=position_ids,
            head_mask=head_mask,
            inputs_embeds=inputs_embeds,
            encoder_hidden_states=encoder_hidden_states,
            encoder_attention_mask=encoder_attention_mask,
            output_attentions=output_attentions,
            output_hidden_states=output_hidden_states,
            return_dict=return_dict,
        )

        sequence_output = outputs[0]
        prediction_scores = self.cls(sequence_output)

        masked_lm_loss = None
        if labels is not None:
            loss_fct = CrossEntropyLoss()  # -100 index = padding token
            masked_lm_loss = loss_fct(prediction_scores.view(-1, self.config.vocab_size), labels.view(-1))

        if not return_dict:
            output = (prediction_scores,) + outputs[2:]
            return ((masked_lm_loss,) + output) if masked_lm_loss is not None else output

        return MaskedLMOutput(
            loss=masked_lm_loss,
            logits=prediction_scores,
            hidden_states=outputs.hidden_states,
            attentions=outputs.attentions,
        )

    def prepare_inputs_for_generation(self, input_ids, attention_mask=None, **model_kwargs):
        input_shape = input_ids.shape
        effective_batch_size = input_shape[0]

        #  add a dummy token
        assert self.config.pad_token_id is not None, "The PAD token should be defined for generation"
        attention_mask = torch.cat([attention_mask, attention_mask.new_zeros((attention_mask.shape[0], 1))], dim=-1)
        dummy_token = torch.full(
            (effective_batch_size, 1), self.config.pad_token_id, dtype=torch.long, device=input_ids.device
        )
        input_ids = torch.cat([input_ids, dummy_token], dim=1)

        return {"input_ids": input_ids, "attention_mask": attention_mask}


@add_start_docstrings(
    """Bert Model with a `next sentence prediction (classification)` head on top. """,
    BERT_START_DOCSTRING,
)
class BertForNextSentencePrediction(BertPreTrainedModel):
    def __init__(self, config):
        super().__init__(config)

        self.bert = BertModel(config)
        self.cls = BertOnlyNSPHead(config)

        self.init_weights()

    @add_start_docstrings_to_model_forward(BERT_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
    @replace_return_docstrings(output_type=NextSentencePredictorOutput, config_class=_CONFIG_FOR_DOC)
    def forward(
        self,
        input_ids=None,
        attention_mask=None,
        token_type_ids=None,
        position_ids=None,
        head_mask=None,
        inputs_embeds=None,
        labels=None,
        output_attentions=None,
        output_hidden_states=None,
        return_dict=None,
        **kwargs,
    ):
        r"""
        labels (:obj:`torch.LongTensor` of shape :obj:`(batch_size,)`, `optional`):
            Labels for computing the next sequence prediction (classification) loss. Input should be a sequence pair
            (see ``input_ids`` docstring). Indices should be in ``[0, 1]``:

            - 0 indicates sequence B is a continuation of sequence A,
            - 1 indicates sequence B is a random sequence.

        Returns:

        Example::

            >>> from transformers import BertTokenizer, BertForNextSentencePrediction
            >>> import torch

            >>> tokenizer = BertTokenizer.from_pretrained('bert-base-uncased')
            >>> model = BertForNextSentencePrediction.from_pretrained('bert-base-uncased')

            >>> prompt = "In Italy, pizza served in formal settings, such as at a restaurant, is presented unsliced."
            >>> next_sentence = "The sky is blue due to the shorter wavelength of blue light."
            >>> encoding = tokenizer(prompt, next_sentence, return_tensors='pt')

            >>> outputs = model(**encoding, labels=torch.LongTensor([1]))
            >>> logits = outputs.logits
            >>> assert logits[0, 0] < logits[0, 1] # next sentence was random
        """

        if "next_sentence_label" in kwargs:
            warnings.warn(
                "The `next_sentence_label` argument is deprecated and will be removed in a future version, use `labels` instead.",
                FutureWarning,
            )
            labels = kwargs.pop("next_sentence_label")

        return_dict = return_dict if return_dict is not None else self.config.use_return_dict

        outputs = self.bert(
            input_ids,
            attention_mask=attention_mask,
            token_type_ids=token_type_ids,
            position_ids=position_ids,
            head_mask=head_mask,
            inputs_embeds=inputs_embeds,
            output_attentions=output_attentions,
            output_hidden_states=output_hidden_states,
            return_dict=return_dict,
        )

        pooled_output = outputs[1]

        seq_relationship_scores = self.cls(pooled_output)

        next_sentence_loss = None
        if labels is not None:
            loss_fct = CrossEntropyLoss()
            next_sentence_loss = loss_fct(seq_relationship_scores.view(-1, 2), labels.view(-1))

        if not return_dict:
            output = (seq_relationship_scores,) + outputs[2:]
            return ((next_sentence_loss,) + output) if next_sentence_loss is not None else output

        return NextSentencePredictorOutput(
            loss=next_sentence_loss,
            logits=seq_relationship_scores,
            hidden_states=outputs.hidden_states,
            attentions=outputs.attentions,
        )


@add_start_docstrings(
    """
    Bert Model transformer with a sequence classification/regression head on top (a linear layer on top of the pooled
    output) e.g. for GLUE tasks.
    """,
    BERT_START_DOCSTRING,
)
class BertForSequenceClassification(BertPreTrainedModel):
    def __init__(self, config):
        super().__init__(config)
        self.num_labels = config.num_labels
        self.config = config

        self.bert = BertModel(config)
        classifier_dropout = (
            config.classifier_dropout if config.classifier_dropout is not None else config.hidden_dropout_prob
        )
        self.dropout = nn.Dropout(classifier_dropout)
        self.classifier = nn.Linear(config.hidden_size, config.num_labels)

        self.skim_coefficient = config.skim_coefficient if hasattr(config, 'skim_coefficient') else 1

        self.init_weights()

    @add_start_docstrings_to_model_forward(BERT_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
    @add_code_sample_docstrings(
        processor_class=_TOKENIZER_FOR_DOC,
        checkpoint=_CHECKPOINT_FOR_DOC,
        output_type=SequenceClassifierOutput,
        config_class=_CONFIG_FOR_DOC,
    )
    def forward(
        self,
        input_ids=None,
        attention_mask=None,
        token_type_ids=None,
        position_ids=None,
        head_mask=None,
        inputs_embeds=None,
        labels=None,
        output_attentions=None,
        output_hidden_states=None,
        return_dict=None,
    ):
        r"""
        labels (:obj:`torch.LongTensor` of shape :obj:`(batch_size,)`, `optional`):
            Labels for computing the sequence classification/regression loss. Indices should be in :obj:`[0, ...,
            config.num_labels - 1]`. If :obj:`config.num_labels == 1` a regression loss is computed (Mean-Square loss),
            If :obj:`config.num_labels > 1` a classification loss is computed (Cross-Entropy).
        """
        # assert gumbel_softmax is not None
        return_dict = return_dict if return_dict is not None else self.config.use_return_dict

        outputs = self.bert(
            input_ids,
            attention_mask=attention_mask,
            token_type_ids=token_type_ids,
            position_ids=position_ids,
            head_mask=head_mask,
            inputs_embeds=inputs_embeds,
            output_attentions=output_attentions,
            output_hidden_states=output_hidden_states,
            return_dict=return_dict,
        )

        pooled_output = outputs[1]

        pooled_output = self.dropout(pooled_output)
        logits = self.classifier(pooled_output)

        loss = None
        if labels is not None:
            if self.config.problem_type is None:
                if self.num_labels == 1:
                    self.config.problem_type = "regression"
                elif self.num_labels > 1 and (labels.dtype == torch.long or labels.dtype == torch.int):
                    self.config.problem_type = "single_label_classification"
                else:
                    self.config.problem_type = "multi_label_classification"

            if self.config.problem_type == "regression":
                loss_fct = MSELoss()
                if self.num_labels == 1:
                    loss = loss_fct(logits.squeeze(), labels.squeeze())
                else:
                    loss = loss_fct(logits, labels)
            elif self.config.problem_type == "single_label_classification":
                loss_fct = CrossEntropyLoss()
                loss = loss_fct(logits.view(-1, self.num_labels), labels.view(-1))
            elif self.config.problem_type == "multi_label_classification":
                loss_fct = BCEWithLogitsLoss()
                loss = loss_fct(logits, labels)
        if not return_dict:
            output = (logits,) + outputs[2:]
            return ((loss,) + output) if loss is not None else output

        skim_loss, neat_mac = 0.0, 0.0
        layer_neat_mac = list()
        all_tokens_length = torch.mean(torch.sum(attention_mask.to(torch.float32),dim=-1))
        for mask in outputs.skim_mask:
            accumulated_skim_mask = torch.mean(torch.sum(mask,dim=1))
            skim_loss += accumulated_skim_mask/mask.shape[1]
            layer_neat_mac.append(accumulated_skim_mask/all_tokens_length)
            neat_mac += accumulated_skim_mask/all_tokens_length
        skim_loss /= self.config.num_hidden_layers
        neat_mac /= self.config.num_hidden_layers
        classification_loss = loss
        # print(skim_loss, neat_mac, loss)
        # loss = skim_loss
        if labels is not None:
            loss = self.skim_coefficient * skim_loss + loss

        return SequenceClassifierOutputSkim(
            loss=loss,
            logits=logits,
            hidden_states=outputs.hidden_states,
            attentions=outputs.attentions,
            attention_mask=outputs.attention_mask,
            skim_mask=outputs.skim_mask,
            skim_loss=skim_loss,
            classification_loss=classification_loss,
            tokens_remained=neat_mac,
            layer_tokens_remained=layer_neat_mac,
        )


@add_start_docstrings(
    """
    Bert Model with a multiple choice classification head on top (a linear layer on top of the pooled output and a
    softmax) e.g. for RocStories/SWAG tasks.
    """,
    BERT_START_DOCSTRING,
)
class BertForMultipleChoice(BertPreTrainedModel):
    def __init__(self, config):
        super().__init__(config)

        self.bert = BertModel(config)
        classifier_dropout = (
            config.classifier_dropout if config.classifier_dropout is not None else config.hidden_dropout_prob
        )
        self.dropout = nn.Dropout(classifier_dropout)
        self.classifier = nn.Linear(config.hidden_size, 1)

        self.init_weights()

    @add_start_docstrings_to_model_forward(BERT_INPUTS_DOCSTRING.format("batch_size, num_choices, sequence_length"))
    @add_code_sample_docstrings(
        processor_class=_TOKENIZER_FOR_DOC,
        checkpoint=_CHECKPOINT_FOR_DOC,
        output_type=MultipleChoiceModelOutput,
        config_class=_CONFIG_FOR_DOC,
    )
    def forward(
        self,
        input_ids=None,
        attention_mask=None,
        token_type_ids=None,
        position_ids=None,
        head_mask=None,
        inputs_embeds=None,
        labels=None,
        output_attentions=None,
        output_hidden_states=None,
        return_dict=None,
    ):
        r"""
        labels (:obj:`torch.LongTensor` of shape :obj:`(batch_size,)`, `optional`):
            Labels for computing the multiple choice classification loss. Indices should be in ``[0, ...,
            num_choices-1]`` where :obj:`num_choices` is the size of the second dimension of the input tensors. (See
            :obj:`input_ids` above)
        """
        return_dict = return_dict if return_dict is not None else self.config.use_return_dict
        num_choices = input_ids.shape[1] if input_ids is not None else inputs_embeds.shape[1]

        input_ids = input_ids.view(-1, input_ids.size(-1)) if input_ids is not None else None
        attention_mask = attention_mask.view(-1, attention_mask.size(-1)) if attention_mask is not None else None
        token_type_ids = token_type_ids.view(-1, token_type_ids.size(-1)) if token_type_ids is not None else None
        position_ids = position_ids.view(-1, position_ids.size(-1)) if position_ids is not None else None
        inputs_embeds = (
            inputs_embeds.view(-1, inputs_embeds.size(-2), inputs_embeds.size(-1))
            if inputs_embeds is not None
            else None
        )

        outputs = self.bert(
            input_ids,
            attention_mask=attention_mask,
            token_type_ids=token_type_ids,
            position_ids=position_ids,
            head_mask=head_mask,
            inputs_embeds=inputs_embeds,
            output_attentions=output_attentions,
            output_hidden_states=output_hidden_states,
            return_dict=return_dict,
        )

        pooled_output = outputs[1]

        pooled_output = self.dropout(pooled_output)
        logits = self.classifier(pooled_output)
        reshaped_logits = logits.view(-1, num_choices)

        loss = None
        if labels is not None:
            loss_fct = CrossEntropyLoss()
            loss = loss_fct(reshaped_logits, labels)

        if not return_dict:
            output = (reshaped_logits,) + outputs[2:]
            return ((loss,) + output) if loss is not None else output

        return MultipleChoiceModelOutput(
            loss=loss,
            logits=reshaped_logits,
            hidden_states=outputs.hidden_states,
            attentions=outputs.attentions,
        )


@add_start_docstrings(
    """
    Bert Model with a token classification head on top (a linear layer on top of the hidden-states output) e.g. for
    Named-Entity-Recognition (NER) tasks.
    """,
    BERT_START_DOCSTRING,
)
class BertForTokenClassification(BertPreTrainedModel):

    _keys_to_ignore_on_load_unexpected = [r"pooler"]

    def __init__(self, config):
        super().__init__(config)
        self.num_labels = config.num_labels

        self.bert = BertModel(config, add_pooling_layer=False)
        classifier_dropout = (
            config.classifier_dropout if config.classifier_dropout is not None else config.hidden_dropout_prob
        )
        self.dropout = nn.Dropout(classifier_dropout)
        self.classifier = nn.Linear(config.hidden_size, config.num_labels)

        self.init_weights()

    @add_start_docstrings_to_model_forward(BERT_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
    @add_code_sample_docstrings(
        processor_class=_TOKENIZER_FOR_DOC,
        checkpoint=_CHECKPOINT_FOR_DOC,
        output_type=TokenClassifierOutput,
        config_class=_CONFIG_FOR_DOC,
    )
    def forward(
        self,
        input_ids=None,
        attention_mask=None,
        token_type_ids=None,
        position_ids=None,
        head_mask=None,
        inputs_embeds=None,
        labels=None,
        output_attentions=None,
        output_hidden_states=None,
        return_dict=None,
    ):
        r"""
        labels (:obj:`torch.LongTensor` of shape :obj:`(batch_size, sequence_length)`, `optional`):
            Labels for computing the token classification loss. Indices should be in ``[0, ..., config.num_labels -
            1]``.
        """
        return_dict = return_dict if return_dict is not None else self.config.use_return_dict

        outputs = self.bert(
            input_ids,
            attention_mask=attention_mask,
            token_type_ids=token_type_ids,
            position_ids=position_ids,
            head_mask=head_mask,
            inputs_embeds=inputs_embeds,
            output_attentions=output_attentions,
            output_hidden_states=output_hidden_states,
            return_dict=return_dict,
        )

        sequence_output = outputs[0]

        sequence_output = self.dropout(sequence_output)
        logits = self.classifier(sequence_output)

        loss = None
        if labels is not None:
            loss_fct = CrossEntropyLoss()
            # Only keep active parts of the loss
            if attention_mask is not None:
                active_loss = attention_mask.view(-1) == 1
                active_logits = logits.view(-1, self.num_labels)
                active_labels = torch.where(
                    active_loss, labels.view(-1), torch.tensor(loss_fct.ignore_index).type_as(labels)
                )
                loss = loss_fct(active_logits, active_labels)
            else:
                loss = loss_fct(logits.view(-1, self.num_labels), labels.view(-1))

        if not return_dict:
            output = (logits,) + outputs[2:]
            return ((loss,) + output) if loss is not None else output

        return TokenClassifierOutput(
            loss=loss,
            logits=logits,
            hidden_states=outputs.hidden_states,
            attentions=outputs.attentions,
        )


@add_start_docstrings(
    """
    Bert Model with a span classification head on top for extractive question-answering tasks like SQuAD (a linear
    layers on top of the hidden-states output to compute `span start logits` and `span end logits`).
    """,
    BERT_START_DOCSTRING,
)
class BertForQuestionAnswering(BertPreTrainedModel):

    _keys_to_ignore_on_load_unexpected = [r"pooler"]

    def __init__(self, config):
        super().__init__(config)
        self.num_labels = config.num_labels

        self.bert = BertModel(config, add_pooling_layer=False)
        self.qa_outputs = nn.Linear(config.hidden_size, config.num_labels)

        self.skim_coefficient = config.skim_coefficient if hasattr(config, 'skim_coefficient') else 1

        self.init_weights()

    @add_start_docstrings_to_model_forward(BERT_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
    @add_code_sample_docstrings(
        processor_class=_TOKENIZER_FOR_DOC,
        checkpoint=_CHECKPOINT_FOR_DOC,
        output_type=QuestionAnsweringModelOutput,
        config_class=_CONFIG_FOR_DOC,
    )
    def forward(
        self,
        input_ids=None,
        attention_mask=None,
        token_type_ids=None,
        position_ids=None,
        head_mask=None,
        inputs_embeds=None,
        start_positions=None,
        end_positions=None,
        output_attentions=None,
        output_hidden_states=None,
        return_dict=None,
    ):
        r"""
        start_positions (:obj:`torch.LongTensor` of shape :obj:`(batch_size,)`, `optional`):
            Labels for position (index) of the start of the labelled span for computing the token classification loss.
            Positions are clamped to the length of the sequence (:obj:`sequence_length`). Position outside of the
            sequence are not taken into account for computing the loss.
        end_positions (:obj:`torch.LongTensor` of shape :obj:`(batch_size,)`, `optional`):
            Labels for position (index) of the end of the labelled span for computing the token classification loss.
            Positions are clamped to the length of the sequence (:obj:`sequence_length`). Position outside of the
            sequence are not taken into account for computing the loss.
        """
        return_dict = return_dict if return_dict is not None else self.config.use_return_dict

        outputs = self.bert(
            input_ids,
            attention_mask=attention_mask,
            token_type_ids=token_type_ids,
            position_ids=position_ids,
            head_mask=head_mask,
            inputs_embeds=inputs_embeds,
            output_attentions=output_attentions,
            output_hidden_states=output_hidden_states,
            return_dict=return_dict,
        )

        sequence_output = outputs[0]

        logits = self.qa_outputs(sequence_output)
        start_logits, end_logits = logits.split(1, dim=-1)
        start_logits = start_logits.squeeze(-1).contiguous()
        end_logits = end_logits.squeeze(-1).contiguous()

        total_loss = None
        if start_positions is not None and end_positions is not None:
            # If we are on multi-GPU, split add a dimension
            if len(start_positions.size()) > 1:
                start_positions = start_positions.squeeze(-1)
            if len(end_positions.size()) > 1:
                end_positions = end_positions.squeeze(-1)
            # sometimes the start/end positions are outside our model inputs, we ignore these terms
            ignored_index = start_logits.size(1)
            start_positions = start_positions.clamp(0, ignored_index)
            end_positions = end_positions.clamp(0, ignored_index)

            loss_fct = CrossEntropyLoss(ignore_index=ignored_index)
            start_loss = loss_fct(start_logits, start_positions)
            end_loss = loss_fct(end_logits, end_positions)
            total_loss = (start_loss + end_loss) / 2

        skim_loss, neat_mac = 0.0, 0.0
        layer_neat_mac = list()
        all_tokens_length = torch.mean(torch.sum(attention_mask.to(torch.float32),dim=-1))
        for mask in outputs.skim_mask:
            accumulated_skim_mask = torch.mean(torch.sum(mask,dim=1))
            skim_loss += accumulated_skim_mask/mask.shape[1]
            layer_neat_mac.append(accumulated_skim_mask/all_tokens_length)
            neat_mac += accumulated_skim_mask/all_tokens_length
        skim_loss /= self.config.num_hidden_layers
        neat_mac /= self.config.num_hidden_layers
        qa_loss = total_loss
        if start_positions is not None and end_positions is not None:
            # print(skim_loss, neat_mac, loss)
            # loss = skim_loss
            total_loss = self.skim_coefficient * skim_loss + qa_loss

        if not return_dict:
            output = (start_logits, end_logits) + outputs[2:]
            return ((total_loss,) + output) if total_loss is not None else output


        return QuestionAnsweringModelOutputSkim(
            loss=total_loss,
            start_logits=start_logits,
            end_logits=end_logits,
            hidden_states=outputs.hidden_states,
            attentions=outputs.attentions,
            attention_mask=outputs.attention_mask,
            skim_mask=outputs.skim_mask,
            skim_loss=skim_loss,
            classification_loss=qa_loss,
            tokens_remained=neat_mac,
            layer_tokens_remained=layer_neat_mac,
        )


def test_BertEncoder():
    import transformers

    logging.debug(f'Start unit test for BertEncoder')

    config = transformers.BertConfig.from_pretrained('bert-base-uncased')
    # config.output_attentions = False
    encoder = BertEncoder(config)

    rand_hidden_states = torch.rand((1,8,768))
    # rand_hidden_states = torch.rand((4,128,768))

    encoder_outputs = encoder(rand_hidden_states)

    logging.debug(f'output attention: {config.output_attentions}, {encoder_outputs[-1][0].shape}')

if __name__ == "__main__":
    import logging

    logging.basicConfig(level=logging.DEBUG)

    test_BertEncoder()