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Moreover since users won't be able to get reviews from us on the Hub, I added a paragraph to tell users that they can open a discussion and tag `datasets` maintainers for reviews.
Finally I removed the _previous good reasons_ to add a dataset on GitHub to only keep this one:
> In some rare cases it makes more sense to open a PR on GitHub. For example when you are not the author of the dataset and there is no clear organization / namespace that you can put the dataset under.
Does it sound good to you @albertvillanova @julien-c ? | {
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] | closed | false | null | [] | null | 1 | 2022-06-23T13:02:52 | 2022-06-23T13:47:05 | 2022-06-23T13:47:04 | NONE | null | ## Describe the bug
imdb dataset not loading
## Steps to reproduce the bug
```python
from datasets import load_dataset
dataset = load_dataset("imdb")
```
## Expected results
## Actual results
```bash
06/23/2022 14:45:18 - INFO - datasets.builder - Dataset not on Hf google storage. Downloading and preparing it from source
06/23/2022 14:46:34 - INFO - datasets.utils.file_utils - HEAD request to http://ai.stanford.edu/~amaas/data/sentiment/aclImdb_v1.tar.gz timed out, retrying... [1.0]
.....
ConnectionError: Couldn't reach http://ai.stanford.edu/~amaas/data/sentiment/aclImdb_v1.tar.gz (ConnectTimeout(MaxRetryError("HTTPConnectionPool(host='ai.stanford.edu', port=80): Max retries exceeded with url: /~amaas/data/sentiment/aclImdb_v1.tar.gz (Caused by ConnectTimeoutError(<urllib3.connection.HTTPConnection object at 0x7f2d750cf690>, 'Connection to ai.stanford.edu timed out. (connect timeout=100)'))")))
```
## Environment info
- `datasets` version: 2.3.2
- Platform: Linux-5.4.188+-x86_64-with-Ubuntu-18.04-bionic
- Python version: 3.7.13
- PyArrow version: 6.0.1
- Pandas version: 1.3.5
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This is related to https://github.com/huggingface/datasets/pull/4505 and the changes from https://github.com/huggingface/datasets/pull/4412 | {
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] | null | 1 | 2022-06-23T10:58:57 | 2022-06-30T10:15:32 | 2022-06-30T10:15:32 | CONTRIBUTOR | null | If data contains a single `metadata.jsonl` file for several splits, it won't be included in a dataset's `data_files` and therefore ignored.
This happens when a directory is structured like as follows:
```
train/
file_1.jpg
file_2.jpg
test/
file_3.jpg
file_4.jpg
metadata.jsonl
```
or like as follows:
```
train_file_1.jpg
train_file_2.jpg
test_file_3.jpg
test_file_4.jpg
metadata.jsonl
```
The same for HF repos.
because it's ignored by the patterns [here](https://github.com/huggingface/datasets/blob/master/src/datasets/data_files.py#L29)
@lhoestq @mariosasko Do you think it's better to add this functionality in `data_files.py` or just specifically in imagefolder/audiofolder code? In `data_files.py` would me more general but I don't know if there are any other cases when that might be needed.
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https://api.github.com/repos/huggingface/datasets/issues/4547 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/4547/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/4547/comments | https://api.github.com/repos/huggingface/datasets/issues/4547/events | https://github.com/huggingface/datasets/pull/4547 | 1,282,160,517 | PR_kwDODunzps46Ot5u | 4,547 | [CI] Fix some warnings | {
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} | [] | closed | false | null | [] | null | 4 | 2022-06-23T10:10:49 | 2022-06-28T14:10:57 | 2022-06-28T13:59:54 | MEMBER | null | There are some warnings in the CI that are annoying, I tried to remove most of them | {
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https://api.github.com/repos/huggingface/datasets/issues/4546 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/4546/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/4546/comments | https://api.github.com/repos/huggingface/datasets/issues/4546/events | https://github.com/huggingface/datasets/pull/4546 | 1,282,093,288 | PR_kwDODunzps46Oe_K | 4,546 | [CI] fixing seqeval install in ci by pinning setuptools-scm | {
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} | [] | closed | false | null | [] | null | 1 | 2022-06-23T09:24:37 | 2022-06-23T10:24:16 | 2022-06-23T10:13:44 | MEMBER | null | The latest setuptools-scm version supported on 3.6 is 6.4.2. However for some reason circleci has version 7, which doesn't work.
I fixed this by pinning the version of setuptools-scm in the circleci job
Fix https://github.com/huggingface/datasets/issues/4544 | {
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https://api.github.com/repos/huggingface/datasets/issues/4545 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/4545/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/4545/comments | https://api.github.com/repos/huggingface/datasets/issues/4545/events | https://github.com/huggingface/datasets/pull/4545 | 1,280,899,028 | PR_kwDODunzps46KV-y | 4,545 | Make DuplicateKeysError more user friendly [For Issue #2556] | {
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} | [] | closed | false | null | [] | null | 2 | 2022-06-22T21:01:34 | 2022-06-28T09:37:06 | 2022-06-28T09:26:04 | CONTRIBUTOR | null | # What does this PR do?
## Summary
*DuplicateKeysError error does not provide any information regarding the examples which have the same the key.*
*This information is very helpful for debugging the dataset generator script.*
## Additions
-
## Changes
- Changed `DuplicateKeysError Class` in `src/datasets/keyhash.py` to add current index and duplicate_key_indices to error message.
- Changed `check_duplicate_keys` function in `src/datasets/arrow_writer.py` to find indices of examples with duplicate hash if duplicate keys are found.
## Deletions
-
## To do :
- [x] Find way to find and print path `<Path to Dataset>` in Error message
## Issues Addressed :
Fixes #2556 | {
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] | null | 0 | 2022-06-22T16:35:23 | 2022-06-23T10:13:44 | 2022-06-23T10:13:44 | MEMBER | null | The CI sometimes fails to install seqeval, which cause the `seqeval` metric tests to fail.
The installation fails because of this error:
```
Collecting seqeval
Downloading seqeval-1.2.2.tar.gz (43 kB)
|███████▌ | 10 kB 42.1 MB/s eta 0:00:01
|███████████████ | 20 kB 53.3 MB/s eta 0:00:01
|██████████████████████▌ | 30 kB 67.2 MB/s eta 0:00:01
|██████████████████████████████ | 40 kB 76.1 MB/s eta 0:00:01
|████████████████████████████████| 43 kB 10.0 MB/s
Preparing metadata (setup.py) ... - error
ERROR: Command errored out with exit status 1:
command: /home/circleci/.pyenv/versions/3.6.15/bin/python3.6 -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-install-1l96tbyj/seqeval_b31086f711d84743abe6905d2aa9dade/setup.py'"'"'; __file__='"'"'/tmp/pip-install-1l96tbyj/seqeval_b31086f711d84743abe6905d2aa9dade/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(__file__) if os.path.exists(__file__) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' egg_info --egg-base /tmp/pip-pip-egg-info-pf54_vqy
cwd: /tmp/pip-install-1l96tbyj/seqeval_b31086f711d84743abe6905d2aa9dade/
Complete output (22 lines):
Traceback (most recent call last):
File "<string>", line 1, in <module>
File "/tmp/pip-install-1l96tbyj/seqeval_b31086f711d84743abe6905d2aa9dade/setup.py", line 56, in <module>
'Programming Language :: Python :: Implementation :: PyPy'
File "/home/circleci/.pyenv/versions/3.6.15/lib/python3.6/site-packages/setuptools/__init__.py", line 143, in setup
return distutils.core.setup(**attrs)
File "/home/circleci/.pyenv/versions/3.6.15/lib/python3.6/distutils/core.py", line 108, in setup
_setup_distribution = dist = klass(attrs)
File "/home/circleci/.pyenv/versions/3.6.15/lib/python3.6/site-packages/setuptools/dist.py", line 442, in __init__
k: v for k, v in attrs.items()
File "/home/circleci/.pyenv/versions/3.6.15/lib/python3.6/distutils/dist.py", line 281, in __init__
self.finalize_options()
File "/home/circleci/.pyenv/versions/3.6.15/lib/python3.6/site-packages/setuptools/dist.py", line 601, in finalize_options
ep.load()(self, ep.name, value)
File "/home/circleci/.pyenv/versions/3.6.15/lib/python3.6/site-packages/pkg_resources/__init__.py", line 2346, in load
return self.resolve()
File "/home/circleci/.pyenv/versions/3.6.15/lib/python3.6/site-packages/pkg_resources/__init__.py", line 2352, in resolve
module = __import__(self.module_name, fromlist=['__name__'], level=0)
File "/tmp/pip-install-1l96tbyj/seqeval_b31086f711d84743abe6905d2aa9dade/.eggs/setuptools_scm-7.0.2-py3.6.egg/setuptools_scm/__init__.py", line 5
from __future__ import annotations
^
SyntaxError: future feature annotations is not defined
----------------------------------------
WARNING: Discarding https://files.pythonhosted.org/packages/9d/2d/233c79d5b4e5ab1dbf111242299153f3caddddbb691219f363ad55ce783d/seqeval-1.2.2.tar.gz#sha256=f28e97c3ab96d6fcd32b648f6438ff2e09cfba87f05939da9b3970713ec56e6f (from https://pypi.org/simple/seqeval/). Command errored out with exit status 1: python setup.py egg_info Check the logs for full command output.
```
for example in https://app.circleci.com/pipelines/github/huggingface/datasets/12665/workflows/93878eb9-a923-4b35-b2e7-c5e9b22f10ad/jobs/75300
Here is a diff of the pip install logs until the error is reached: https://www.diffchecker.com/VkQDLeQT
This could be caused by the latest updates of setuptools-scm | {
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} | [] | closed | false | null | [] | null | 2 | 2022-06-22T15:34:27 | 2022-06-22T16:37:40 | 2022-06-22T16:27:37 | MEMBER | null | Some tests were still using moon-stagign instead of hub-ci.
I also updated the token to use one dedicated to `datasets` | {
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] | open | false | null | [] | null | 48 | 2022-06-22T14:42:00 | 2022-10-11T08:45:45 | null | MEMBER | null | To have better performance in TensorFlow, it is important to provide lists of data files in supported formats. For example sharded TFRecords datasets are extremely performant. This is because tf.data can better leverage parallelism in this case, and load one file at a time in memory.
It seems that using `tensorflow_io` we could have something similar for `to_tf_dataset` if we provide sharded Feather files: https://www.tensorflow.org/io/api_docs/python/tfio/arrow/ArrowFeatherDataset
Feather is a format almost equivalent to the Arrow IPC Stream format we're using in `datasets`: Feather V2 is equivalent to Arrow IPC File format, which is an extension of the stream format (it has an extra footer). Therefore we could store datasets as Feather instead of Arrow IPC Stream format without breaking the whole library.
Here are a few points to explore
- [ ] check the performance of ArrowFeatherDataset in tf.data
- [ ] check what would change if we were to switch to Feather if needed, in particular check that those are fine: memory mapping, typing, writing, reading to python objects, etc.
We would also need to implement sharding when loading a dataset (this will be done anyway for #546)
cc @Rocketknight1 @gante feel free to comment in case I missed anything !
I'll share some files and scripts, so that we can benchmark performance of Feather files with tf.data | null | {
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} | [] | closed | false | null | [] | null | 2 | 2022-06-22T13:40:01 | 2022-06-22T16:39:27 | 2022-06-22T16:29:09 | MEMBER | null | Arrow accepts both pd.Timestamp and datetime.datetime objects to create timestamp arrays.
However a timestamp array is always converted to datetime.datetime objects.
This created an inconsistency between streaming in non-streaming. e.g. the `ett` dataset outputs datetime.datetime objects in non-streaming but pd.timestamp in streaming.
I fixed this by always converting pd.Timestamp to datetime.datetime during the example encoding step.
I fixed the same issue for pd.Timedelta as well. Finally I added an extra step of conversion for Series and DataFrame to take this into account in case such data are passed as Series or DataFrame.
Fix https://github.com/huggingface/datasets/issues/4533
Related to https://github.com/huggingface/datasets-server/issues/397 | {
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Hello,
Thanks you for this library .
I was using it and I had one edge case. my home folder name ends with `.py` it is `/home/espoir.py` so anytime I am running the code to load a local module this code here it is failing because after splitting it is trying to save the code to my home directory.
Step to reproduce.
- If you have a home folder which ends with `.py`
- load a module with a local folder
`qa_dataset = load_dataset("src/data/build_qa_dataset.py")`
it is failed
A possible workaround would be to use pathlib at the mentioned line
` meta_path = Path(importable_local_file).parent.joinpath("metadata.json")` this can alivate the issue .
Let me what are your thought on this and I can try to fix it by A PR.
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} | [] | closed | false | null | [] | null | 0 | 2022-06-22T08:32:29 | 2022-06-22T13:43:23 | 2022-06-22T12:51:51 | CONTRIBUTOR | null | Replace `logging.warn` (deprecated in [Python 2.7, 2011](https://github.com/python/cpython/commit/04d5bc00a219860c69ea17eaa633d3ab9917409f)) with `logging.warning` (added in [Python 2.3, 2003](https://github.com/python/cpython/commit/6fa635df7aa88ae9fd8b41ae42743341316c90f7)).
* https://docs.python.org/3/library/logging.html#logging.Logger.warning
* https://github.com/python/cpython/issues/57444
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https://huggingface.co/datasets/pile-of-law/pile-of-law
### Description
Hi, I would like to turn off the dataset viewer for our dataset without enabling access requests. To comply with upstream dataset creator requests/licenses, we would like to make sure that the data is not indexed by search engines and so would like to turn off dataset previews. But we do not want to collect user emails because it would violate single blind review, allowing us to deduce potential reviewers' identities. Is there a way that we can turn off the dataset viewer without collecting identity information?
Thanks so much!
### Owner
Yes | {
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https://api.github.com/repos/huggingface/datasets/issues/4537 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/4537/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/4537/comments | https://api.github.com/repos/huggingface/datasets/issues/4537/events | https://github.com/huggingface/datasets/pull/4537 | 1,279,144,310 | PR_kwDODunzps46ESJn | 4,537 | Fix WMT dataset loading issue and docs update | {
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Changes are made for `wmt14`, `wmt15`, `wmt16`, `wmt17`, `wmt18`, `wmt19` and `wmt_t2t`. And READMEs are updated for the corresponding datasets.
As I am on a M1 Mac, I am not able to create a virtual `dev` environment using `pip install -e ".[dev]"`. Issue is with `tensorflow-text` not supported on M1s and there is no supporting repo by Apple or Google. So, if I was needed to perform local testing, I am not able to do that.
Let me know, if any additional changes are required.
Thanks | {
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https://api.github.com/repos/huggingface/datasets/issues/4536 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/4536/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/4536/comments | https://api.github.com/repos/huggingface/datasets/issues/4536/events | https://github.com/huggingface/datasets/pull/4536 | 1,278,734,727 | PR_kwDODunzps46C2z6 | 4,536 | Properly raise FileNotFound even if the dataset is private | {
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} | [] | closed | false | null | [] | null | 1 | 2022-06-21T17:05:50 | 2022-06-28T10:46:51 | 2022-06-28T10:36:10 | MEMBER | null | `tests/test_load.py::test_load_streaming_private_dataset` was failing because the hub now returns 401 when getting the HfApi.dataset_info of a dataset without authentication. `load_dataset` was raising ConnectionError, while it should be FileNoteFoundError since it first checks for local files before checking the Hub.
Moreover when use_auth_token is not set (default is False), we should not pass `token=None` to HfApi.dataset_info, or it will use the local token by default - instead it should use no token. It's currently not possible to ask for no token to be used, so as a workaround I simply set token="no-token" | {
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} | [] | closed | false | null | [] | null | 5 | 2022-06-21T12:18:49 | 2022-06-27T16:25:09 | 2022-06-27T16:14:36 | MEMBER | null | Currently, even though the `batch_size` when adding vectors to the FAISS index can be tweaked in `FaissIndex.add_vectors()`, the function `ArrowDataset.add_faiss_index` doesn't have either the parameter `batch_size` to be propagated to the nested `FaissIndex.add_vectors` function or `*args, **kwargs`, so on, this PR adds the `batch_size` parameter to both `ArrowDataset.add_faiss_index` and `ArrowDataset.add_faiss_index_from_external_arrays`.
This is useful so as to tweak the `batch_size` according to the VM specifications. | {
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This dataset is based on the daily [tldr tech newsletter](https://tldr.tech/newsletter) and contains a `headline` as well as a `content` for every piece of news contained in a newsletter. | {
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```python
>>> from datasets import load_dataset
>>> dataset = load_dataset("ett", name="h2", split="test", streaming=True)
>>> d = next(iter(dataset))
>>> d['start']
Timestamp('2016-07-01 00:00:00')
```
while loading in non-streaming mode it returns `datetime.datetime(2016, 7, 1, 0, 0)` | {
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https://huggingface.co/datasets/scikit-learn/breast-cancer-wisconsin
### Description
I'm populating CSV datasets [here](https://huggingface.co/scikit-learn) but the viewer is not enabled and it looks for a dataset loading script, the datasets aren't on queue as well.
You can replicate the problem by simply uploading any CSV dataset.
### Owner
Yes | {
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AudioFolder is almost identical to ImageFolder except for inferring labels is not the default behavior (`drop_labels` is set to True in config), the option of inferring them is preserved though.
The weird thing is happening with the `test_data_files_with_metadata_and_archives` when `streaming` is `True`. Here is the log from the CI:
```
../.pyenv/versions/3.6.15/lib/python3.6/site-packages/datasets/features/audio.py:237: in _decode_non_mp3_path_like
array, sampling_rate = librosa.load(f, sr=self.sampling_rate, mono=self.mono)
../.pyenv/versions/3.6.15/lib/python3.6/site-packages/librosa/util/decorators.py:88: in inner_f
return f(*args, **kwargs)
../.pyenv/versions/3.6.15/lib/python3.6/site-packages/librosa/core/audio.py:176: in load
raise (exc)
../.pyenv/versions/3.6.15/lib/python3.6/site-packages/librosa/core/audio.py:155: in load
context = sf.SoundFile(path)
../.pyenv/versions/3.6.15/lib/python3.6/site-packages/soundfile.py:629: in __init__
self._file = self._open(file, mode_int, closefd)
../.pyenv/versions/3.6.15/lib/python3.6/site-packages/soundfile.py:1184: in _open
"Error opening {0!r}: ".format(self.name))
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
err = 72
prefix = "Error opening <zipfile.ZipExtFile name='audio_file.wav' mode='r' compress_type=deflate>: "
def _error_check(err, prefix=""):
"""Pretty-print a numerical error code if there is an error."""
if err != 0:
err_str = _snd.sf_error_number(err)
> raise RuntimeError(prefix + _ffi.string(err_str).decode('utf-8', 'replace'))
E RuntimeError: Error opening <zipfile.ZipExtFile name='audio_file.wav' mode='r' compress_type=deflate>: Error in WAV file. No 'data' chunk marker.
```
I hadn't been able to reproduce this locally until I created the same test environment (I mean with `pip install .[tests]`) with python3.6. The same env but with python3.8 passes the test! I didn't manage to figure out what's wrong, I also tried simply to replace the test wav file and still got the same error. Versions of `soundfile`, `librosa` and `libsndfile` are identical. Might it be something with zip compression? Sounds weird but I don't have any other ideas...
TODO:
- [x] align with #4622
- [x] documentation
- [x] tests for AutoFolder? | {
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https://api.github.com/repos/huggingface/datasets/issues/4529 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/4529/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/4529/comments | https://api.github.com/repos/huggingface/datasets/issues/4529/events | https://github.com/huggingface/datasets/issues/4529 | 1,276,729,303 | I_kwDODunzps5MGVfX | 4,529 | Ecoset | {
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] | closed | false | null | [] | null | 3 | 2022-06-20T10:39:34 | 2023-10-26T09:12:32 | 2023-10-04T18:19:52 | NONE | null | ## Adding a Dataset
- **Name:** *Ecoset*
- **Description:** *https://www.kietzmannlab.org/ecoset/*
- **Paper:** *https://doi.org/10.1073/pnas.2011417118*
- **Data:** *https://codeocean.com/capsule/9570390/tree/v1*
- **Motivation:**
**Ecoset** was created as a clean and ecologically valid alternative to **Imagenet**.
It is a large image recognition dataset, similar to Imagenet in size and structure. However, the authors of ecoset claim several improvements over Imagenet, like:
- more ecologically valid classes (e.g. not over-focussed on distinguishing different dog breeds)
- less NSFW content
- 'pre-packed image recognition models' that come with the dataset and can be used for validation of other models.
I am working for one of the authors of the paper with the aim of bringing Ecoset to huggingface datasets. Therefore I can work on this issue personally, but could use some help from devs and experienced users if the dataset is of interest to them. I phrased some of my questions on [discuss.huggingface](/static-proxy?url=https%3A%2F%2Fdiscuss.huggingface.co%2Ft%2Fhandling-large-image-datasets%2F19373).
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https://api.github.com/repos/huggingface/datasets/issues/4528 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/4528/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/4528/comments | https://api.github.com/repos/huggingface/datasets/issues/4528/events | https://github.com/huggingface/datasets/issues/4528 | 1,276,679,155 | I_kwDODunzps5MGJPz | 4,528 | Memory leak when iterating a Dataset | {
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] | closed | false | null | [] | null | 5 | 2022-06-20T10:03:14 | 2022-09-12T08:51:39 | 2022-09-12T08:51:39 | MEMBER | null | e## Describe the bug
It seems that memory never gets freed after iterating a `Dataset` (using `.map()` or a simple `for` loop)
## Steps to reproduce the bug
```python
import gc
import logging
import time
import pyarrow
from datasets import load_dataset
from tqdm import trange
import os, psutil
logging.basicConfig(level=logging.INFO)
logger = logging.getLogger(__name__)
process = psutil.Process(os.getpid())
print(process.memory_info().rss) # output: 633507840 bytes
corpus = load_dataset("BeIR/msmarco", 'corpus', keep_in_memory=False, streaming=False)['corpus'] # or "BeIR/trec-covid" for a smaller dataset
print(process.memory_info().rss) # output: 698601472 bytes
logger.info("Applying method to all examples in all splits")
for i in trange(0, len(corpus), 1000):
batch = corpus[i:i+1000]
data = pyarrow.total_allocated_bytes()
if data > 0:
logger.info(f"{i}/{len(corpus)}: {data}")
print(process.memory_info().rss) # output: 3788247040 bytes
del batch
gc.collect()
print(process.memory_info().rss) # output: 3788247040 bytes
logger.info("Done...")
time.sleep(100)
```
## Expected results
Limited memory usage, and memory to be freed after processing
## Actual results
Memory leak
![test](https://user-images.githubusercontent.com/29777165/174578276-f2c37e6c-b5d8-4985-b4d8-8413eb2b3241.png)
You can see how the memory allocation keeps increasing until it reaches a steady state when we hit the `time.sleep(100)`, which showcases that even the garbage collector couldn't free the allocated memory
## Environment info
<!-- You can run the command `datasets-cli env` and copy-and-paste its output below. -->
- `datasets` version: 2.3.2
- Platform: Linux-5.4.0-90-generic-x86_64-with-glibc2.31
- Python version: 3.9.7
- PyArrow version: 8.0.0
- Pandas version: 1.4.2
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https://api.github.com/repos/huggingface/datasets/issues/4527 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/4527/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/4527/comments | https://api.github.com/repos/huggingface/datasets/issues/4527/events | https://github.com/huggingface/datasets/issues/4527 | 1,276,583,536 | I_kwDODunzps5MFx5w | 4,527 | Dataset Viewer issue for vadis/sv-ident | {
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] | null | 1 | 2022-06-20T08:47:42 | 2022-06-21T16:42:46 | 2022-06-21T16:42:45 | MEMBER | null | ### Link
https://huggingface.co/datasets/vadis/sv-ident
### Description
The dataset preview does not work:
```
Server Error
Status code: 400
Exception: Status400Error
Message: The dataset does not exist.
```
However, the dataset is streamable and works locally:
```python
In [1]: from datasets import load_dataset; ds = load_dataset("sv-ident.py", split="train", streaming=True); item = next(iter(ds)); item
Using custom data configuration default
Out[1]:
{'sentence': 'Our point, however, is that so long as downward (favorable) comparisons overwhelm the potential for unfavorable comparisons, system justification should be a likely outcome amongst the disadvantaged.',
'is_variable': 1,
'variable': ['exploredata-ZA5400_VarV66', 'exploredata-ZA5400_VarV53'],
'research_data': ['ZA5400'],
'doc_id': '73106',
'uuid': 'b9fbb80f-3492-4b42-b9d5-0254cc33ac10',
'lang': 'en'}
```
CC: @e-tornike
### Owner
No | {
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https://api.github.com/repos/huggingface/datasets/issues/4526 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/4526/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/4526/comments | https://api.github.com/repos/huggingface/datasets/issues/4526/events | https://github.com/huggingface/datasets/issues/4526 | 1,276,580,185 | I_kwDODunzps5MFxFZ | 4,526 | split cache used when processing different split | {
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] | open | false | null | [] | null | 2 | 2022-06-20T08:44:58 | 2022-06-28T14:04:58 | null | CONTRIBUTOR | null | ## Describe the bug`
```
ds1 = load_dataset('squad', split='validation')
ds2 = load_dataset('squad', split='train')
ds1 = ds1.map(some_function)
ds2 = ds2.map(some_function)
assert ds1 == ds2
```
This happens when ds1 and ds2 are created in `pytorch_lightning.DataModule` through
```
class myDataModule:
def train_dataloader(self):
ds = load_dataset('squad', split='train')
ds = ds.map(some_function)
return [ds]
def val_dataloader(self):
ds = load_dataset('squad', split="validation")
ds = ds.map(some_function)
return [ds]
```
I don't know if it depends on `pytorch_lightning` or `datasets` but setting `ds.map(some_function, load_from_cache_file=False)` fixes the issue.
If this is not enough to replicate I will try and provide and MWE, I don't have time now so I thought I wuld open the issue first! | null | {
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https://api.github.com/repos/huggingface/datasets/issues/4525 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/4525/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/4525/comments | https://api.github.com/repos/huggingface/datasets/issues/4525/events | https://github.com/huggingface/datasets/issues/4525 | 1,276,491,386 | I_kwDODunzps5MFbZ6 | 4,525 | Out of memory error on workers while running Beam+Dataflow | {
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] | closed | false | null | [] | null | 10 | 2022-06-20T07:28:12 | 2024-10-09T16:09:50 | 2024-10-09T16:09:50 | MEMBER | null | ## Describe the bug
While running the preprocessing of the natural_question dataset (see PR #4368), there is an issue for the "default" config (train+dev files).
Previously we ran the preprocessing for the "dev" config (only dev files) with success.
Train data files are larger than dev ones and apparently workers run out of memory while processing them.
Any help/hint is welcome!
Error message:
```
Data channel closed, unable to receive additional data from SDK sdk-0-0
```
Info from the Diagnostics tab:
```
Out of memory: Killed process 1882 (python) total-vm:6041764kB, anon-rss:3290928kB, file-rss:0kB, shmem-rss:0kB, UID:0 pgtables:9520kB oom_score_adj:900
The worker VM had to shut down one or more processes due to lack of memory.
```
## Additional information
### Stack trace
```
Traceback (most recent call last):
File "/home/albert_huggingface_co/natural_questions/venv/bin/datasets-cli", line 8, in <module>
sys.exit(main())
File "/home/albert_huggingface_co/natural_questions/venv/lib/python3.9/site-packages/datasets/commands/datasets_cli.py", line 39, in main
service.run()
File "/home/albert_huggingface_co/natural_questions/venv/lib/python3.9/site-packages/datasets/commands/run_beam.py", line 127, in run
builder.download_and_prepare(
File "/home/albert_huggingface_co/natural_questions/venv/lib/python3.9/site-packages/datasets/builder.py", line 704, in download_and_prepare
self._download_and_prepare(
File "/home/albert_huggingface_co/natural_questions/venv/lib/python3.9/site-packages/datasets/builder.py", line 1389, in _download_and_prepare
pipeline_results.wait_until_finish()
File "/home/albert_huggingface_co/natural_questions/venv/lib/python3.9/site-packages/apache_beam/runners/dataflow/dataflow_runner.py", line 1667, in wait_until_finish
raise DataflowRuntimeException(
apache_beam.runners.dataflow.dataflow_runner.DataflowRuntimeException: Dataflow pipeline failed. State: FAILED, Error:
Data channel closed, unable to receive additional data from SDK sdk-0-0
```
### Logs
```
Error message from worker: Data channel closed, unable to receive additional data from SDK sdk-0-0
Workflow failed. Causes: S30:train/ReadAllFromText/ReadAllFiles/Reshard/ReshufflePerKey/GroupByKey/Read+train/ReadAllFromText/ReadAllFiles/Reshard/ReshufflePerKey/GroupByKey/GroupByWindow+train/ReadAllFromText/ReadAllFiles/Reshard/ReshufflePerKey/FlatMap(restore_timestamps)+train/ReadAllFromText/ReadAllFiles/Reshard/RemoveRandomKeys+train/ReadAllFromText/ReadAllFiles/ReadRange+train/Map(_parse_example)+train/Encode+train/Count N. Examples+train/Get values/Values+train/Save to parquet/Write/WriteImpl/WindowInto(WindowIntoFn)+train/Save to parquet/Write/WriteImpl/WriteBundles+train/Save to parquet/Write/WriteImpl/Pair+train/Save to parquet/Write/WriteImpl/GroupByKey/Write failed., The job failed because a work item has failed 4 times. Look in previous log entries for the cause of each one of the 4 failures. For more information, see https://cloud.google.com/dataflow/docs/guides/common-errors. The work item was attempted on these workers: beamapp-alberthuggingface-06170554-5p23-harness-t4v9 Root cause: Data channel closed, unable to receive additional data from SDK sdk-0-0, beamapp-alberthuggingface-06170554-5p23-harness-t4v9 Root cause: The worker lost contact with the service., beamapp-alberthuggingface-06170554-5p23-harness-bwsj Root cause: The worker lost contact with the service., beamapp-alberthuggingface-06170554-5p23-harness-5052 Root cause: The worker lost contact with the service.
```
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https://api.github.com/repos/huggingface/datasets/issues/4524 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/4524/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/4524/comments | https://api.github.com/repos/huggingface/datasets/issues/4524/events | https://github.com/huggingface/datasets/issues/4524 | 1,275,909,186 | I_kwDODunzps5MDNRC | 4,524 | Downloading via Apache Pipeline, client cancelled (org.apache.beam.vendor.grpc.v1p43p2.io.grpc.StatusRuntimeException) | {
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] | open | false | null | [] | null | 2 | 2022-06-18T23:36:45 | 2022-06-21T00:38:20 | null | NONE | null | ## Describe the bug
When downloading some `wikipedia` languages (in particular, I'm having a hard time with Spanish, Cebuano, and Russian) via FlinkRunner, I encounter the exception in the title. I have been playing with package versions a lot, because unfortunately, the different dependencies required by these packages seem to be incompatible in terms of versions (dill and requests, for instance). It should be noted that the following code runs for several hours without issue, executing the `load_dataset()` function, before the exception occurs.
## Steps to reproduce the bug
```python
# bash commands
!pip install datasets
!pip install apache-beam[interactive]
!pip install mwparserfromhell
!pip install dill==0.3.5.1
!pip install requests==2.23.0
# imports
import os
from datasets import load_dataset
import apache_beam as beam
import mwparserfromhell
from google.colab import drive
import dill
import requests
# mount drive
drive_dir = os.path.join(os.getcwd(), 'drive')
drive.mount(drive_dir)
# confirming the versions of these two packages are the ones that are suggested by the outputs from the bash commands
print(dill.__version__)
print(requests.__version__)
lang = 'es' # or 'ru' or 'ceb' - these are the ones causing the issue
lang_dir = os.path.join(drive_dir, 'path/to/my/folder', lang)
if not os.path.exists(lang_dir):
x = None
x = load_dataset('wikipedia', '20220301.' + lang, beam_runner='Flink',
split='train')
x.save_to_disk(lang_dir)
```
## Expected results
Although some warnings are generally produced by this code (run in Colab Notebook), most languages I've tried have been successfully downloaded. It should simply go through without issue, but for these languages, I am continually encountering this error.
## Actual results
Traceback below:
```
Exception in thread run_worker_3-1:
Traceback (most recent call last):
File "/usr/lib/python3.7/threading.py", line 926, in _bootstrap_inner
self.run()
File "/usr/lib/python3.7/threading.py", line 870, in run
self._target(*self._args, **self._kwargs)
File "/usr/local/lib/python3.7/dist-packages/apache_beam/runners/worker/sdk_worker.py", line 234, in run
for work_request in self._control_stub.Control(get_responses()):
File "/usr/local/lib/python3.7/dist-packages/grpc/_channel.py", line 426, in __next__
return self._next()
File "/usr/local/lib/python3.7/dist-packages/grpc/_channel.py", line 826, in _next
raise self
grpc._channel._MultiThreadedRendezvous: <_MultiThreadedRendezvous of RPC that terminated with:
status = StatusCode.UNAVAILABLE
details = "Socket closed"
debug_error_string = "{"created":"@1655593643.871830638","description":"Error received from peer ipv4:127.0.0.1:44441","file":"src/core/lib/surface/call.cc","file_line":952,"grpc_message":"Socket closed","grpc_status":14}"
>
Traceback (most recent call last):
File "apache_beam/runners/common.py", line 1198, in apache_beam.runners.common.DoFnRunner.process
File "apache_beam/runners/common.py", line 718, in apache_beam.runners.common.PerWindowInvoker.invoke_process
File "apache_beam/runners/common.py", line 782, in apache_beam.runners.common.PerWindowInvoker._invoke_process_per_window
File "/usr/local/lib/python3.7/dist-packages/apache_beam/runners/worker/bundle_processor.py", line 426, in __getitem__
self._cache[target_window] = self._side_input_data.view_fn(raw_view)
File "/usr/local/lib/python3.7/dist-packages/apache_beam/pvalue.py", line 391, in <lambda>
lambda iterable: from_runtime_iterable(iterable, view_options))
File "/usr/local/lib/python3.7/dist-packages/apache_beam/pvalue.py", line 512, in _from_runtime_iterable
head = list(itertools.islice(it, 2))
File "/usr/local/lib/python3.7/dist-packages/apache_beam/runners/worker/sdk_worker.py", line 1228, in _lazy_iterator
self._underlying.get_raw(state_key, continuation_token))
File "/usr/local/lib/python3.7/dist-packages/apache_beam/runners/worker/sdk_worker.py", line 1019, in get_raw
continuation_token=continuation_token)))
File "/usr/local/lib/python3.7/dist-packages/apache_beam/runners/worker/sdk_worker.py", line 1060, in _blocking_request
raise RuntimeError(response.error)
RuntimeError: Unknown process bundle instruction id '26'
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/usr/local/lib/python3.7/dist-packages/apache_beam/runners/worker/sdk_worker.py", line 267, in _execute
response = task()
File "/usr/local/lib/python3.7/dist-packages/apache_beam/runners/worker/sdk_worker.py", line 340, in <lambda>
lambda: self.create_worker().do_instruction(request), request)
File "/usr/local/lib/python3.7/dist-packages/apache_beam/runners/worker/sdk_worker.py", line 581, in do_instruction
getattr(request, request_type), request.instruction_id)
File "/usr/local/lib/python3.7/dist-packages/apache_beam/runners/worker/sdk_worker.py", line 618, in process_bundle
bundle_processor.process_bundle(instruction_id))
File "/usr/local/lib/python3.7/dist-packages/apache_beam/runners/worker/bundle_processor.py", line 996, in process_bundle
element.data)
File "/usr/local/lib/python3.7/dist-packages/apache_beam/runners/worker/bundle_processor.py", line 221, in process_encoded
self.output(decoded_value)
File "apache_beam/runners/worker/operations.py", line 346, in apache_beam.runners.worker.operations.Operation.output
File "apache_beam/runners/worker/operations.py", line 348, in apache_beam.runners.worker.operations.Operation.output
File "apache_beam/runners/worker/operations.py", line 215, in apache_beam.runners.worker.operations.SingletonConsumerSet.receive
File "apache_beam/runners/worker/operations.py", line 707, in apache_beam.runners.worker.operations.DoOperation.process
File "apache_beam/runners/worker/operations.py", line 708, in apache_beam.runners.worker.operations.DoOperation.process
File "apache_beam/runners/common.py", line 1200, in apache_beam.runners.common.DoFnRunner.process
File "apache_beam/runners/common.py", line 1281, in apache_beam.runners.common.DoFnRunner._reraise_augmented
File "apache_beam/runners/common.py", line 1198, in apache_beam.runners.common.DoFnRunner.process
File "apache_beam/runners/common.py", line 718, in apache_beam.runners.common.PerWindowInvoker.invoke_process
File "apache_beam/runners/common.py", line 782, in apache_beam.runners.common.PerWindowInvoker._invoke_process_per_window
File "/usr/local/lib/python3.7/dist-packages/apache_beam/runners/worker/bundle_processor.py", line 426, in __getitem__
self._cache[target_window] = self._side_input_data.view_fn(raw_view)
File "/usr/local/lib/python3.7/dist-packages/apache_beam/pvalue.py", line 391, in <lambda>
lambda iterable: from_runtime_iterable(iterable, view_options))
File "/usr/local/lib/python3.7/dist-packages/apache_beam/pvalue.py", line 512, in _from_runtime_iterable
head = list(itertools.islice(it, 2))
File "/usr/local/lib/python3.7/dist-packages/apache_beam/runners/worker/sdk_worker.py", line 1228, in _lazy_iterator
self._underlying.get_raw(state_key, continuation_token))
File "/usr/local/lib/python3.7/dist-packages/apache_beam/runners/worker/sdk_worker.py", line 1019, in get_raw
continuation_token=continuation_token)))
File "/usr/local/lib/python3.7/dist-packages/apache_beam/runners/worker/sdk_worker.py", line 1060, in _blocking_request
raise RuntimeError(response.error)
RuntimeError: Unknown process bundle instruction id '26' [while running 'train/Save to parquet/Write/WriteImpl/WriteBundles']
ERROR:apache_beam.runners.worker.sdk_worker:Error processing instruction 26. Original traceback is
Traceback (most recent call last):
File "apache_beam/runners/common.py", line 1198, in apache_beam.runners.common.DoFnRunner.process
File "apache_beam/runners/common.py", line 718, in apache_beam.runners.common.PerWindowInvoker.invoke_process
File "apache_beam/runners/common.py", line 782, in apache_beam.runners.common.PerWindowInvoker._invoke_process_per_window
File "/usr/local/lib/python3.7/dist-packages/apache_beam/runners/worker/bundle_processor.py", line 426, in __getitem__
self._cache[target_window] = self._side_input_data.view_fn(raw_view)
File "/usr/local/lib/python3.7/dist-packages/apache_beam/pvalue.py", line 391, in <lambda>
lambda iterable: from_runtime_iterable(iterable, view_options))
File "/usr/local/lib/python3.7/dist-packages/apache_beam/pvalue.py", line 512, in _from_runtime_iterable
head = list(itertools.islice(it, 2))
File "/usr/local/lib/python3.7/dist-packages/apache_beam/runners/worker/sdk_worker.py", line 1228, in _lazy_iterator
self._underlying.get_raw(state_key, continuation_token))
File "/usr/local/lib/python3.7/dist-packages/apache_beam/runners/worker/sdk_worker.py", line 1019, in get_raw
continuation_token=continuation_token)))
File "/usr/local/lib/python3.7/dist-packages/apache_beam/runners/worker/sdk_worker.py", line 1060, in _blocking_request
raise RuntimeError(response.error)
RuntimeError: Unknown process bundle instruction id '26'
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "/usr/local/lib/python3.7/dist-packages/apache_beam/runners/worker/sdk_worker.py", line 267, in _execute
response = task()
File "/usr/local/lib/python3.7/dist-packages/apache_beam/runners/worker/sdk_worker.py", line 340, in <lambda>
lambda: self.create_worker().do_instruction(request), request)
File "/usr/local/lib/python3.7/dist-packages/apache_beam/runners/worker/sdk_worker.py", line 581, in do_instruction
getattr(request, request_type), request.instruction_id)
File "/usr/local/lib/python3.7/dist-packages/apache_beam/runners/worker/sdk_worker.py", line 618, in process_bundle
bundle_processor.process_bundle(instruction_id))
File "/usr/local/lib/python3.7/dist-packages/apache_beam/runners/worker/bundle_processor.py", line 996, in process_bundle
element.data)
File "/usr/local/lib/python3.7/dist-packages/apache_beam/runners/worker/bundle_processor.py", line 221, in process_encoded
self.output(decoded_value)
File "apache_beam/runners/worker/operations.py", line 346, in apache_beam.runners.worker.operations.Operation.output
File "apache_beam/runners/worker/operations.py", line 348, in apache_beam.runners.worker.operations.Operation.output
File "apache_beam/runners/worker/operations.py", line 215, in apache_beam.runners.worker.operations.SingletonConsumerSet.receive
File "apache_beam/runners/worker/operations.py", line 707, in apache_beam.runners.worker.operations.DoOperation.process
File "apache_beam/runners/worker/operations.py", line 708, in apache_beam.runners.worker.operations.DoOperation.process
File "apache_beam/runners/common.py", line 1200, in apache_beam.runners.common.DoFnRunner.process
File "apache_beam/runners/common.py", line 1281, in apache_beam.runners.common.DoFnRunner._reraise_augmented
File "apache_beam/runners/common.py", line 1198, in apache_beam.runners.common.DoFnRunner.process
File "apache_beam/runners/common.py", line 718, in apache_beam.runners.common.PerWindowInvoker.invoke_process
File "apache_beam/runners/common.py", line 782, in apache_beam.runners.common.PerWindowInvoker._invoke_process_per_window
File "/usr/local/lib/python3.7/dist-packages/apache_beam/runners/worker/bundle_processor.py", line 426, in __getitem__
self._cache[target_window] = self._side_input_data.view_fn(raw_view)
File "/usr/local/lib/python3.7/dist-packages/apache_beam/pvalue.py", line 391, in <lambda>
lambda iterable: from_runtime_iterable(iterable, view_options))
File "/usr/local/lib/python3.7/dist-packages/apache_beam/pvalue.py", line 512, in _from_runtime_iterable
head = list(itertools.islice(it, 2))
File "/usr/local/lib/python3.7/dist-packages/apache_beam/runners/worker/sdk_worker.py", line 1228, in _lazy_iterator
self._underlying.get_raw(state_key, continuation_token))
File "/usr/local/lib/python3.7/dist-packages/apache_beam/runners/worker/sdk_worker.py", line 1019, in get_raw
continuation_token=continuation_token)))
File "/usr/local/lib/python3.7/dist-packages/apache_beam/runners/worker/sdk_worker.py", line 1060, in _blocking_request
raise RuntimeError(response.error)
RuntimeError: Unknown process bundle instruction id '26' [while running 'train/Save to parquet/Write/WriteImpl/WriteBundles']
ERROR:root:org.apache.beam.vendor.grpc.v1p43p2.io.grpc.StatusRuntimeException: CANCELLED: client cancelled
ERROR:apache_beam.runners.worker.data_plane:Failed to read inputs in the data plane.
Traceback (most recent call last):
File "/usr/local/lib/python3.7/dist-packages/apache_beam/runners/worker/data_plane.py", line 634, in _read_inputs
for elements in elements_iterator:
File "/usr/local/lib/python3.7/dist-packages/grpc/_channel.py", line 426, in __next__
return self._next()
File "/usr/local/lib/python3.7/dist-packages/grpc/_channel.py", line 826, in _next
raise self
grpc._channel._MultiThreadedRendezvous: <_MultiThreadedRendezvous of RPC that terminated with:
status = StatusCode.CANCELLED
details = "Multiplexer hanging up"
debug_error_string = "{"created":"@1655593654.436885887","description":"Error received from peer ipv4:127.0.0.1:43263","file":"src/core/lib/surface/call.cc","file_line":952,"grpc_message":"Multiplexer hanging up","grpc_status":1}"
>
Exception in thread read_grpc_client_inputs:
Traceback (most recent call last):
File "/usr/lib/python3.7/threading.py", line 926, in _bootstrap_inner
self.run()
File "/usr/lib/python3.7/threading.py", line 870, in run
self._target(*self._args, **self._kwargs)
File "/usr/local/lib/python3.7/dist-packages/apache_beam/runners/worker/data_plane.py", line 651, in <lambda>
target=lambda: self._read_inputs(elements_iterator),
File "/usr/local/lib/python3.7/dist-packages/apache_beam/runners/worker/data_plane.py", line 634, in _read_inputs
for elements in elements_iterator:
File "/usr/local/lib/python3.7/dist-packages/grpc/_channel.py", line 426, in __next__
return self._next()
File "/usr/local/lib/python3.7/dist-packages/grpc/_channel.py", line 826, in _next
raise self
grpc._channel._MultiThreadedRendezvous: <_MultiThreadedRendezvous of RPC that terminated with:
status = StatusCode.CANCELLED
details = "Multiplexer hanging up"
debug_error_string = "{"created":"@1655593654.436885887","description":"Error received from peer ipv4:127.0.0.1:43263","file":"src/core/lib/surface/call.cc","file_line":952,"grpc_message":"Multiplexer hanging up","grpc_status":1}"
>
---------------------------------------------------------------------------
RuntimeError Traceback (most recent call last)
[/tmp/ipykernel_219/3869142325.py](https://localhost:8080/#) in <module>
18 x = None
19 x = load_dataset('wikipedia', '20220301.' + lang, beam_runner='Flink',
---> 20 split='train')
21 x.save_to_disk(lang_dir)
3 frames
[/usr/local/lib/python3.7/dist-packages/apache_beam/runners/portability/portable_runner.py](https://localhost:8080/#) in wait_until_finish(self, duration)
604
605 if self._runtime_exception:
--> 606 raise self._runtime_exception
607
608 return self._state
RuntimeError: Pipeline BeamApp-root-0618220708-b3b59a0e_d8efcf67-9119-4f76-b013-70de7b29b54d failed in state FAILED: org.apache.beam.vendor.grpc.v1p43p2.io.grpc.StatusRuntimeException: CANCELLED: client cancelled
```
## Environment info
<!-- You can run the command `datasets-cli env` and copy-and-paste its output below. -->
- `datasets` version: 2.3.2
- Platform: Linux-5.4.188+-x86_64-with-Ubuntu-18.04-bionic
- Python version: 3.7.13
- PyArrow version: 6.0.1
- Pandas version: 1.3.5
| null | {
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https://api.github.com/repos/huggingface/datasets/issues/4523 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/4523/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/4523/comments | https://api.github.com/repos/huggingface/datasets/issues/4523/events | https://github.com/huggingface/datasets/pull/4523 | 1,275,002,639 | PR_kwDODunzps452hgh | 4,523 | Update download url and improve card of `cats_vs_dogs` dataset | {
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} | [] | closed | false | null | [] | null | 1 | 2022-06-17T12:59:44 | 2022-06-21T14:23:26 | 2022-06-21T14:13:08 | COLLABORATOR | null | Improve the download URL (reported here: https://huggingface.co/datasets/cats_vs_dogs/discussions/1), remove the `image_file_path` column (not used in Transformers, so it should be safe) and add more info to the card. | {
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https://api.github.com/repos/huggingface/datasets/issues/4522 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/4522/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/4522/comments | https://api.github.com/repos/huggingface/datasets/issues/4522/events | https://github.com/huggingface/datasets/issues/4522 | 1,274,929,328 | I_kwDODunzps5L_eCw | 4,522 | Try to reduce the number of datasets that require manual download | {
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] | null | 0 | 2022-06-17T11:42:03 | 2022-06-17T11:52:48 | null | COLLABORATOR | null | > Currently, 41 canonical datasets require manual download. I checked their scripts and I'm pretty sure this number can be reduced to ≈ 30 by not relying on bash scripts to download data, hosting data directly on the Hub when the license permits, etc. Then, we will mostly be left with datasets with restricted access, which we can ignore
from https://github.com/huggingface/datasets-server/issues/12#issuecomment-1026920432 | null | {
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https://api.github.com/repos/huggingface/datasets/issues/4521 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/4521/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/4521/comments | https://api.github.com/repos/huggingface/datasets/issues/4521/events | https://github.com/huggingface/datasets/issues/4521 | 1,274,919,437 | I_kwDODunzps5L_boN | 4,521 | Datasets method `.map` not hashing | {
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] | closed | false | null | [] | null | 3 | 2022-06-17T11:31:10 | 2022-08-04T12:08:16 | 2022-06-28T13:23:05 | CONTRIBUTOR | null | ## Describe the bug
Datasets method `.map` not hashing, even with an empty no-op function
## Steps to reproduce the bug
```python
from datasets import load_dataset
# download 9MB dummy dataset
ds = load_dataset("hf-internal-testing/librispeech_asr_dummy", "clean")
def prepare_dataset(batch):
return(batch)
ds = ds.map(
prepare_dataset,
num_proc=1,
desc="preprocess train dataset",
)
```
## Expected results
Hashed and cached dataset preprocessing
## Actual results
Does not hash properly:
```
Parameter 'function'=<function prepare_dataset at 0x7fccb68e9280> of the transform datasets.arrow_dataset.Dataset._map_single couldn't be hashed properly, a random hash was used instead. Make sure your transforms and parameters are serializable with pickle or dill for the dataset fingerprinting and caching to work. If you reuse this transform, the caching mechanism will consider it to be different from the previous calls and recompute everything. This warning is only showed once. Subsequent hashing failures won't be showed.
```
## Environment info
<!-- You can run the command `datasets-cli env` and copy-and-paste its output below. -->
- `datasets` version: 2.3.3.dev0
- Platform: Linux-5.11.0-1028-gcp-x86_64-with-glibc2.31
- Python version: 3.9.12
- PyArrow version: 8.0.0
- Pandas version: 1.4.2
cc @lhoestq
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https://api.github.com/repos/huggingface/datasets/issues/4520 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/4520/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/4520/comments | https://api.github.com/repos/huggingface/datasets/issues/4520/events | https://github.com/huggingface/datasets/issues/4520 | 1,274,879,180 | I_kwDODunzps5L_RzM | 4,520 | Failure to hash `dataclasses` - results in functions that cannot be hashed or cached in `.map` | {
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] | closed | false | null | [] | null | 2 | 2022-06-17T10:47:17 | 2022-06-28T14:47:17 | 2022-06-28T14:04:29 | CONTRIBUTOR | null | Dataclasses cannot be hashed. As a result, they cannot be hashed or cached if used in the `.map` method. Dataclasses are used extensively in Transformers examples scripts: (c.f. [CTC example](https://github.com/huggingface/transformers/blob/main/examples/pytorch/speech-recognition/run_speech_recognition_ctc.py)). Since dataclasses cannot be hashed, one has to define separate variables prior to passing dataclass attributes to the `.map` method:
```python
phoneme_language = data_args.phoneme_language
```
in the example https://github.com/huggingface/transformers/blob/3c7e56fbb11f401de2528c1dcf0e282febc031cd/examples/pytorch/speech-recognition/run_speech_recognition_ctc.py#L603-L630
## Steps to reproduce the bug
```python
from dataclasses import dataclass, field
from datasets.fingerprint import Hasher
@dataclass
class DataTrainingArguments:
"""
Arguments pertaining to what data we are going to input our model for training and eval.
"""
phoneme_language: str = field(
default=None, metadata={"help": "The name of the phoneme language to use."}
)
data_args = DataTrainingArguments(phoneme_language ="foo")
Hasher.hash(data_args)
phoneme_language = data_args.phoneme_language
Hasher.hash(phoneme_language)
```
## Expected results
A hash.
## Actual results
<details>
<summary> Traceback </summary>
```
---------------------------------------------------------------------------
KeyError Traceback (most recent call last)
Input In [1], in <cell line: 16>()
10 phoneme_language: str = field(
11 default=None, metadata={"help": "The name of the phoneme language to use."}
12 )
14 data_args = DataTrainingArguments(phoneme_language ="foo")
---> 16 Hasher.hash(data_args)
18 phoneme_language = data_args. phoneme_language
20 Hasher.hash(phoneme_language)
File ~/datasets/src/datasets/fingerprint.py:237, in Hasher.hash(cls, value)
235 return cls.dispatch[type(value)](cls, value)
236 else:
--> 237 return cls.hash_default(value)
File ~/datasets/src/datasets/fingerprint.py:230, in Hasher.hash_default(cls, value)
228 @classmethod
229 def hash_default(cls, value: Any) -> str:
--> 230 return cls.hash_bytes(dumps(value))
File ~/datasets/src/datasets/utils/py_utils.py:564, in dumps(obj)
562 file = StringIO()
563 with _no_cache_fields(obj):
--> 564 dump(obj, file)
565 return file.getvalue()
File ~/datasets/src/datasets/utils/py_utils.py:539, in dump(obj, file)
537 def dump(obj, file):
538 """pickle an object to a file"""
--> 539 Pickler(file, recurse=True).dump(obj)
540 return
File ~/hf/lib/python3.8/site-packages/dill/_dill.py:620, in Pickler.dump(self, obj)
618 raise PicklingError(msg)
619 else:
--> 620 StockPickler.dump(self, obj)
621 return
File /usr/lib/python3.8/pickle.py:487, in _Pickler.dump(self, obj)
485 if self.proto >= 4:
486 self.framer.start_framing()
--> 487 self.save(obj)
488 self.write(STOP)
489 self.framer.end_framing()
File /usr/lib/python3.8/pickle.py:603, in _Pickler.save(self, obj, save_persistent_id)
599 raise PicklingError("Tuple returned by %s must have "
600 "two to six elements" % reduce)
602 # Save the reduce() output and finally memoize the object
--> 603 self.save_reduce(obj=obj, *rv)
File /usr/lib/python3.8/pickle.py:687, in _Pickler.save_reduce(self, func, args, state, listitems, dictitems, state_setter, obj)
684 raise PicklingError(
685 "args[0] from __newobj__ args has the wrong class")
686 args = args[1:]
--> 687 save(cls)
688 save(args)
689 write(NEWOBJ)
File /usr/lib/python3.8/pickle.py:560, in _Pickler.save(self, obj, save_persistent_id)
558 f = self.dispatch.get(t)
559 if f is not None:
--> 560 f(self, obj) # Call unbound method with explicit self
561 return
563 # Check private dispatch table if any, or else
564 # copyreg.dispatch_table
File ~/hf/lib/python3.8/site-packages/dill/_dill.py:1838, in save_type(pickler, obj, postproc_list)
1836 postproc_list = []
1837 postproc_list.append((setattr, (obj, '__qualname__', obj_name)))
-> 1838 _save_with_postproc(pickler, (_create_type, (
1839 type(obj), obj.__name__, obj.__bases__, _dict
1840 )), obj=obj, postproc_list=postproc_list)
1841 log.info("# %s" % _t)
1842 else:
File ~/hf/lib/python3.8/site-packages/dill/_dill.py:1140, in _save_with_postproc(pickler, reduction, is_pickler_dill, obj, postproc_list)
1137 pickler._postproc[id(obj)] = postproc_list
1139 # TODO: Use state_setter in Python 3.8 to allow for faster cPickle implementations
-> 1140 pickler.save_reduce(*reduction, obj=obj)
1142 if is_pickler_dill:
1143 # pickler.x -= 1
1144 # print(pickler.x*' ', 'pop', obj, id(obj))
1145 postproc = pickler._postproc.pop(id(obj))
File /usr/lib/python3.8/pickle.py:692, in _Pickler.save_reduce(self, func, args, state, listitems, dictitems, state_setter, obj)
690 else:
691 save(func)
--> 692 save(args)
693 write(REDUCE)
695 if obj is not None:
696 # If the object is already in the memo, this means it is
697 # recursive. In this case, throw away everything we put on the
698 # stack, and fetch the object back from the memo.
File /usr/lib/python3.8/pickle.py:560, in _Pickler.save(self, obj, save_persistent_id)
558 f = self.dispatch.get(t)
559 if f is not None:
--> 560 f(self, obj) # Call unbound method with explicit self
561 return
563 # Check private dispatch table if any, or else
564 # copyreg.dispatch_table
File /usr/lib/python3.8/pickle.py:901, in _Pickler.save_tuple(self, obj)
899 write(MARK)
900 for element in obj:
--> 901 save(element)
903 if id(obj) in memo:
904 # Subtle. d was not in memo when we entered save_tuple(), so
905 # the process of saving the tuple's elements must have saved
(...)
909 # could have been done in the "for element" loop instead, but
910 # recursive tuples are a rare thing.
911 get = self.get(memo[id(obj)][0])
File /usr/lib/python3.8/pickle.py:560, in _Pickler.save(self, obj, save_persistent_id)
558 f = self.dispatch.get(t)
559 if f is not None:
--> 560 f(self, obj) # Call unbound method with explicit self
561 return
563 # Check private dispatch table if any, or else
564 # copyreg.dispatch_table
File ~/hf/lib/python3.8/site-packages/dill/_dill.py:1251, in save_module_dict(pickler, obj)
1248 if is_dill(pickler, child=False) and pickler._session:
1249 # we only care about session the first pass thru
1250 pickler._first_pass = False
-> 1251 StockPickler.save_dict(pickler, obj)
1252 log.info("# D2")
1253 return
File /usr/lib/python3.8/pickle.py:971, in _Pickler.save_dict(self, obj)
968 self.write(MARK + DICT)
970 self.memoize(obj)
--> 971 self._batch_setitems(obj.items())
File /usr/lib/python3.8/pickle.py:997, in _Pickler._batch_setitems(self, items)
995 for k, v in tmp:
996 save(k)
--> 997 save(v)
998 write(SETITEMS)
999 elif n:
File /usr/lib/python3.8/pickle.py:560, in _Pickler.save(self, obj, save_persistent_id)
558 f = self.dispatch.get(t)
559 if f is not None:
--> 560 f(self, obj) # Call unbound method with explicit self
561 return
563 # Check private dispatch table if any, or else
564 # copyreg.dispatch_table
File ~/datasets/src/datasets/utils/py_utils.py:862, in save_function(pickler, obj)
859 if state_dict:
860 state = state, state_dict
--> 862 dill._dill._save_with_postproc(
863 pickler,
864 (
865 dill._dill._create_function,
866 (obj.__code__, globs, obj.__name__, obj.__defaults__, closure),
867 state,
868 ),
869 obj=obj,
870 postproc_list=postproc_list,
871 )
872 else:
873 closure = obj.func_closure
File ~/hf/lib/python3.8/site-packages/dill/_dill.py:1153, in _save_with_postproc(pickler, reduction, is_pickler_dill, obj, postproc_list)
1151 dest, source = reduction[1]
1152 if source:
-> 1153 pickler.write(pickler.get(pickler.memo[id(dest)][0]))
1154 pickler._batch_setitems(iter(source.items()))
1155 else:
1156 # Updating with an empty dictionary. Same as doing nothing.
KeyError: 140434581781568
```
</details>
## Environment info
<!-- You can run the command `datasets-cli env` and copy-and-paste its output below. -->
- `datasets` version: 2.3.3.dev0
- Platform: Linux-5.11.0-1028-gcp-x86_64-with-glibc2.29
- Python version: 3.8.10
- PyArrow version: 8.0.0
- Pandas version: 1.4.2
cc @lhoestq | {
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https://api.github.com/repos/huggingface/datasets/issues/4519 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/4519/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/4519/comments | https://api.github.com/repos/huggingface/datasets/issues/4519/events | https://github.com/huggingface/datasets/pull/4519 | 1,274,110,623 | PR_kwDODunzps45zhqa | 4,519 | Create new sections for audio and vision in guides | {
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] | closed | false | null | [] | null | 2 | 2022-06-16T21:38:24 | 2022-07-07T15:36:37 | 2022-07-07T15:24:58 | MEMBER | null | This PR creates separate sections in the guides for audio, vision, text, and general usage so it is easier for users to find loading, processing, or sharing guides specific to the dataset type they're working with. It'll also allow us to scale the docs to additional dataset types - like time series, tabular, etc. - while keeping our docs information architecture.
Some other changes include:
- ~Experimented with decorating text with some CSS to highlight guides specific to each modality. Hopefully, it'll be easier for users to find and realize that these different docs exist!~ Will experiment with this in a different PR.
- Added deprecation warning for Metrics and redirect to Evaluate.
- Updated `set_format` section to recommend using the new `to_tf_dataset` function if you need to convert to a TensorFlow dataset.
- Reorganized `toctree` to nest general usage, audio, vision, and text sections under the how-to guides.
- A quick review and edit to the Load and Process docs for clarity. | {
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https://api.github.com/repos/huggingface/datasets/issues/4518 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/4518/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/4518/comments | https://api.github.com/repos/huggingface/datasets/issues/4518/events | https://github.com/huggingface/datasets/pull/4518 | 1,274,010,628 | PR_kwDODunzps45zMnB | 4,518 | Patch tests for hfh v0.8.0 | {
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} | [] | closed | false | null | [] | null | 1 | 2022-06-16T19:45:32 | 2022-06-17T16:15:57 | 2022-06-17T16:06:07 | MEMBER | null | This PR patches testing utilities that would otherwise fail with hfh v0.8.0. | {
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https://api.github.com/repos/huggingface/datasets/issues/4517 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/4517/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/4517/comments | https://api.github.com/repos/huggingface/datasets/issues/4517/events | https://github.com/huggingface/datasets/pull/4517 | 1,273,960,476 | PR_kwDODunzps45zBl0 | 4,517 | Add tags for task_ids:summarization-* and task_categories:summarization* | {
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} | [] | closed | false | null | [] | null | 2 | 2022-06-16T18:52:25 | 2022-07-08T15:14:23 | 2022-07-08T15:02:31 | CONTRIBUTOR | null | yaml header at top of README.md file was edited to add task tags because I couldn't find the existing tags in the json
separate Pull Request will modify dataset_infos.json to add these tags
The Enron dataset (dataset id aeslc) is only tagged with:
arxiv:1906.03497'
languages:en
pretty_name:AESLC
Using the email subject_line field as a label or target variable it possible to create models for the following task_ids (in order of relevance):
'task_ids:summarization'
'task_ids:summarization-other-conversations-summarization'
"task_ids:other-other-query-based-multi-document-summarization"
'task_ids:summarization-other-aspect-based-summarization'
'task_ids:summarization--other-headline-generation'
The subject might also be used for the task_category "task_categories:summarization"
E-mail chains might be used for the task category "task_categories:dialogue-system" | {
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https://api.github.com/repos/huggingface/datasets/issues/4516 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/4516/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/4516/comments | https://api.github.com/repos/huggingface/datasets/issues/4516/events | https://github.com/huggingface/datasets/pull/4516 | 1,273,825,640 | PR_kwDODunzps45ykYX | 4,516 | Fix hashing for python 3.9 | {
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} | [] | closed | false | null | [] | null | 2 | 2022-06-16T16:42:31 | 2022-06-28T13:33:46 | 2022-06-28T13:23:06 | MEMBER | null | In python 3.9, pickle hashes the `glob_ids` dictionary in addition to the `globs` of a function.
Therefore the test at `tests/test_fingerprint.py::RecurseDumpTest::test_recurse_dump_for_function_with_shuffled_globals` is currently failing for python 3.9
To make hashing deterministic when the globals are not in the same order, we also need to make the order of `glob_ids` deterministic.
Right now we don't have a CI to test python 3.9 but we should definitely have one. For this PR in particular I ran the tests locally using python 3.9 and they're passing now.
Fix https://github.com/huggingface/datasets/issues/4506 | {
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https://api.github.com/repos/huggingface/datasets/issues/4515 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/4515/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/4515/comments | https://api.github.com/repos/huggingface/datasets/issues/4515/events | https://github.com/huggingface/datasets/pull/4515 | 1,273,626,131 | PR_kwDODunzps45x5mB | 4,515 | Add uppercased versions of image file extensions for automatic module inference | {
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} | [] | closed | false | null | [] | null | 1 | 2022-06-16T14:14:49 | 2022-06-16T17:21:53 | 2022-06-16T17:11:41 | COLLABORATOR | null | Adds the uppercased versions of the image file extensions to the supported extensions.
Another approach would be to call `.lower()` on extensions while resolving data files, but uppercased extensions are not something we want to encourage out of the box IMO unless they are commonly used (as they are in the vision domain)
Note that there is a slight discrepancy between the image file resolution and `imagefolder` as the latter calls `.lower()` on file extensions leading to some image file extensions being ignored by the resolution but not by the loader (e.g. `pNg`). Such extensions should also be discouraged, so I'm ignoring that case too.
Fix #4514. | {
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https://api.github.com/repos/huggingface/datasets/issues/4514 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/4514/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/4514/comments | https://api.github.com/repos/huggingface/datasets/issues/4514/events | https://github.com/huggingface/datasets/issues/4514 | 1,273,505,230 | I_kwDODunzps5L6CXO | 4,514 | Allow .JPEG as a file extension | {
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] | closed | false | null | [] | null | 2 | 2022-06-16T12:36:20 | 2022-06-20T08:18:46 | 2022-06-16T17:11:40 | NONE | null | ## Describe the bug
When loading image data, HF datasets seems to recognize `.jpg` and `.jpeg` file extensions, but not e.g. .JPEG. As the naming convention .JPEG is used in important datasets such as imagenet, I would welcome if according extensions like .JPEG or .JPG would be allowed.
## Steps to reproduce the bug
```python
# use bash to create 2 sham datasets with jpeg and JPEG ext
!mkdir dataset_a
!mkdir dataset_b
!wget https://upload.wikimedia.org/wikipedia/commons/7/71/Dsc_%28179253513%29.jpeg -O example_img.jpeg
!cp example_img.jpeg ./dataset_a/
!mv example_img.jpeg ./dataset_b/example_img.JPEG
from datasets import load_dataset
# working
df1 = load_dataset("./dataset_a", ignore_verifications=True)
#not working
df2 = load_dataset("./dataset_b", ignore_verifications=True)
# show
print(df1, df2)
```
## Expected results
```
DatasetDict({
train: Dataset({
features: ['image', 'label'],
num_rows: 1
})
}) DatasetDict({
train: Dataset({
features: ['image', 'label'],
num_rows: 1
})
})
```
## Actual results
```
FileNotFoundError: Unable to resolve any data file that matches '['**']' at /..PATH../dataset_b with any supported extension ['csv', 'tsv', 'json', 'jsonl', 'parquet', 'txt', 'blp', 'bmp', 'dib', 'bufr', 'cur', 'pcx', 'dcx', 'dds', 'ps', 'eps', 'fit', 'fits', 'fli', 'flc', 'ftc', 'ftu', 'gbr', 'gif', 'grib', 'h5', 'hdf', 'png', 'apng', 'jp2', 'j2k', 'jpc', 'jpf', 'jpx', 'j2c', 'icns', 'ico', 'im', 'iim', 'tif', 'tiff', 'jfif', 'jpe', 'jpg', 'jpeg', 'mpg', 'mpeg', 'msp', 'pcd', 'pxr', 'pbm', 'pgm', 'ppm', 'pnm', 'psd', 'bw', 'rgb', 'rgba', 'sgi', 'ras', 'tga', 'icb', 'vda', 'vst', 'webp', 'wmf', 'emf', 'xbm', 'xpm', 'zip']
```
I know that it can be annoying to allow seemingly arbitrary numbers of file extensions. But I think this one would be really welcome. | {
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] | closed | false | null | [] | null | 5 | 2022-06-16T11:46:09 | 2022-06-23T17:05:11 | 2022-06-23T16:54:59 | MEMBER | null | While I was going through the 🤗 Datasets documentation of the Cloud storage filesystems at https://huggingface.co/docs/datasets/filesystems, I realized that the Google Cloud Storage documentation could be improved e.g. bullet point says "Load your dataset" when the actual call was to "Save your dataset", in-line code comment was mentioning "s3 bucket" instead of "gcs bucket", and some more in-line comments could be included.
Also, I think that mixing Google Cloud Storage documentation with AWS S3's one was a little bit confusing, so I moved all those to the end of the document under an h2 tab named "Other filesystems", with an h3 for "Google Cloud Storage".
Besides that, I was currently working with Azure Blob Storage and found out that the URL to [adlfs](https://github.com/fsspec/adlfs) was common for both filesystems Azure Blob Storage and Azure DataLake Storage, as well as the URL, which was updated even though the redirect was working fine, so I decided to group those under the same row in the column of supported filesystems.
And took also the change to add a small documentation entry as for Google Cloud Storage but for Azure Blob Storage, as I assume that AWS S3, GCP Cloud Storage, and Azure Blob Storage, are the most used cloud storage providers.
Let me know if you're OK with these changes, or whether you want me to roll back some of those! :hugs: | {
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Fix https://github.com/huggingface/datasets/issues/4508 | {
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https://api.github.com/repos/huggingface/datasets/issues/4510 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/4510/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/4510/comments | https://api.github.com/repos/huggingface/datasets/issues/4510/events | https://github.com/huggingface/datasets/pull/4510 | 1,273,260,396 | PR_kwDODunzps45wq6o | 4,510 | Add regression test for `ArrowWriter.write_batch` when batch is empty | {
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} | [] | closed | false | null | [] | null | 2 | 2022-06-16T08:53:51 | 2022-06-16T12:38:02 | 2022-06-16T12:28:19 | MEMBER | null | As spotted by @cccntu in #4502, there's a logic bug in `ArrowWriter.write_batch` as the if-statement to handle the empty batches as detailed in the docstrings of the function ("Ignores the batch if it appears to be empty, preventing a potential schema update of unknown types."), the current if-statement is not handling properly `writer.write_batch({})` as an error is triggered.
Also, if we add a regression test in `test_arrow_writer.py::test_write_batch` before applying the fix, the test will fail as when trying to write an empty batch as follows:
```
=================================================================================== short test summary info ===================================================================================
FAILED tests/test_arrow_writer.py::test_write_batch[None-None] - ValueError: Schema and number of arrays unequal
FAILED tests/test_arrow_writer.py::test_write_batch[None-1] - ValueError: Schema and number of arrays unequal
FAILED tests/test_arrow_writer.py::test_write_batch[None-10] - ValueError: Schema and number of arrays unequal
FAILED tests/test_arrow_writer.py::test_write_batch[fields1-None] - ValueError: Schema and number of arrays unequal
FAILED tests/test_arrow_writer.py::test_write_batch[fields1-1] - ValueError: Schema and number of arrays unequal
FAILED tests/test_arrow_writer.py::test_write_batch[fields1-10] - ValueError: Schema and number of arrays unequal
FAILED tests/test_arrow_writer.py::test_write_batch[fields2-None] - ValueError: Schema and number of arrays unequal
FAILED tests/test_arrow_writer.py::test_write_batch[fields2-1] - ValueError: Schema and number of arrays unequal
FAILED tests/test_arrow_writer.py::test_write_batch[fields2-10] - ValueError: Schema and number of arrays unequal
======================================================================== 9 failed, 73 deselected, 7 warnings in 0.81s =========================================================================
```
So the batch is not ignored when empty, as `batch_examples={}` won't match the condition `if batch_examples: ...`. | {
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A bug occurs when mapping a function to a dataset object. I ran the same code with the same data yesterday and it worked just fine. It works when i run locally on an old version of datasets.
## Steps to reproduce the bug
Steps are:
- load whatever datset
- write a preprocessing function such as "tokenize_and_align_labels" written in https://huggingface.co/docs/transformers/tasks/token_classification
- map the function on dataset and get "ValueError: Class label -100 less than -1" from cast_storage method from datasets.features
# Sample code to reproduce the bug
def tokenize_and_align_labels(examples):
tokenized_inputs = tokenizer(examples["tokens"], truncation=True, is_split_into_words=True, max_length=38,padding="max_length")
labels = []
for i, label in enumerate(examples[f"labels"]):
word_ids = tokenized_inputs.word_ids(batch_index=i) # Map tokens to their respective word.
previous_word_idx = None
label_ids = []
for word_idx in word_ids: # Set the special tokens to -100.
if word_idx is None:
label_ids.append(-100)
elif word_idx != previous_word_idx: # Only label the first token of a given word.
label_ids.append(label[word_idx])
else:
label_ids.append(-100)
previous_word_idx = word_idx
labels.append(label_ids)
tokenized_inputs["labels"] = labels
return tokenized_inputs
tokenizer = AutoTokenizer.from_pretrained("distilbert-base-uncased")
dt = dataset.map(tokenize_and_align_labels, batched=True)
## Expected results
New dataset objects should load and do on older versions.
## Actual results
"ValueError: Class label -100 less than -1" from cast_storage method from datasets.features
## Environment info
everything works fine on older installations of datasets/transformers
Issue arises when installing datasets on google collab under python3.7
I can't manage to find the exact output you're requirering but version printed is datasets-2.3.2
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] | closed | false | null | [] | null | 2 | 2022-06-15T18:56:34 | 2022-06-16T10:40:08 | 2022-06-16T10:40:08 | NONE | null | If the dataset does not need splits, i.e., no training and validation split, more like a table. How can I let the `load_dataset` function return a `Dataset` object directly rather than return a `DatasetDict` object with only one key-value pair.
Or I can paraphrase the question in the following way: how to skip `_split_generators` step in `DatasetBuilder` to let `as_dataset` gives a single `Dataset` rather than a list`[Dataset]`?
Many thanks for any help. | {
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] | null | 5 | 2022-06-15T17:11:31 | 2023-02-16T03:14:32 | 2022-06-28T13:23:05 | NONE | null | ## Describe the bug
Sometimes I get messages about not being able to hash a method:
`Parameter 'function'=<function StupidDataModule._separate_speaker_id_from_dialogue at 0x7f1b27180d30> of the transform datasets.arrow_dataset.Dataset.
_map_single couldn't be hashed properly, a random hash was used instead. Make sure your transforms and parameters are serializable with pickle or dill for the dataset fingerprinting and caching to work. If you reuse this transform, the caching mechanism will consider it to be different from the previous calls and recompute everything. This warning is only showed once. Subsequent hashing failures won't be showed.`
Whilst the function looks like this:
```python
@staticmethod
def _separate_speaker_id_from_dialogue(example: arrow_dataset.Example):
speaker_id, dialogue = tuple(zip(*(example["dialogue"])))
example["speaker_id"] = speaker_id
example["dialogue"] = dialogue
return example
```
This is the first step in my preprocessing pipeline, but sometimes the message about failure to hash is not appearing on the first step, but then appears on a later step.
This error is sometimes causing a failure to use cached data, instead of re-running all steps again.
## Steps to reproduce the bug
```python
import copy
import datasets
from datasets import arrow_dataset
def main():
dataset = datasets.load_dataset("blended_skill_talk")
res = dataset.map(method)
print(res)
def method(example: arrow_dataset.Example):
example['previous_utterance_copy'] = copy.deepcopy(example['previous_utterance'])
return example
if __name__ == '__main__':
main()
```
Run with:
```
python -m reproduce_error
```
## Expected results
Dataset is mapped and cached correctly.
## Actual results
The code outputs this at some point:
`Parameter 'function'=<function method at 0x7faa83d2a160> of the transform datasets.arrow_dataset.Dataset._map_single couldn't be hashed properly, a random hash was used instead. Make sure your transforms and parameters are serializable with pickle or dill for the dataset fingerprinting and caching to work. If you reuse this transform, the caching mechanism will consider it to be different from the previous calls and recompute everything. This warning is only showed once. Subsequent hashing failures won't be showed.`
## Environment info
<!-- You can run the command `datasets-cli env` and copy-and-paste its output below. -->
- `datasets` version:
- Platform: Ubuntu 20.04.3
- Python version: 3.9.12
- PyArrow version: 8.0.0
- Datasets version: 2.3.1
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https://api.github.com/repos/huggingface/datasets/issues/4505 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/4505/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/4505/comments | https://api.github.com/repos/huggingface/datasets/issues/4505/events | https://github.com/huggingface/datasets/pull/4505 | 1,272,477,226 | PR_kwDODunzps45uH-o | 4,505 | Fix double dots in data files | {
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} | [] | closed | false | null | [] | null | 2 | 2022-06-15T16:31:04 | 2022-06-15T17:15:58 | 2022-06-15T17:05:53 | MEMBER | null | As mentioned in https://github.com/huggingface/transformers/pull/17715 `data_files` can't find a file if the path contains double dots `/../`. This has been introduced in https://github.com/huggingface/datasets/pull/4412, by trying to ignore hidden files and directories (i.e. if they start with a dot)
I fixed this and added a test
cc @sgugger @ydshieh | {
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https://api.github.com/repos/huggingface/datasets/issues/4504 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/4504/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/4504/comments | https://api.github.com/repos/huggingface/datasets/issues/4504/events | https://github.com/huggingface/datasets/issues/4504 | 1,272,418,480 | I_kwDODunzps5L15Cw | 4,504 | Can you please add the Stanford dog dataset? | {
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] | null | 16 | 2022-06-15T15:39:35 | 2024-12-09T15:44:11 | 2023-10-18T18:55:30 | NONE | null | ## Adding a Dataset
- **Name:** *Stanford dog dataset*
- **Description:** *The dataset is about 120 classes for a total of 20.580 images. You can find the dataset here http://vision.stanford.edu/aditya86/ImageNetDogs/*
- **Paper:** *http://vision.stanford.edu/aditya86/ImageNetDogs/*
- **Data:** *[link to the Github repository or current dataset location](http://vision.stanford.edu/aditya86/ImageNetDogs/)*
- **Motivation:** *The dataset has been built using images and annotation from ImageNet for the task of fine-grained image categorization. It is useful for fine-grain purpose *
Instructions to add a new dataset can be found [here](https://github.com/huggingface/datasets/blob/master/ADD_NEW_DATASET.md).
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https://api.github.com/repos/huggingface/datasets/issues/4502 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/4502/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/4502/comments | https://api.github.com/repos/huggingface/datasets/issues/4502/events | https://github.com/huggingface/datasets/issues/4502 | 1,272,353,700 | I_kwDODunzps5L1pOk | 4,502 | Logic bug in arrow_writer? | {
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} | [] | closed | false | null | [] | null | 10 | 2022-06-15T14:50:00 | 2022-06-18T15:15:51 | 2022-06-18T15:15:51 | CONTRIBUTOR | null | https://github.com/huggingface/datasets/blob/88a902d6474fae8d793542d57a4f3b0d187f3c5b/src/datasets/arrow_writer.py#L475-L488
I got some error, and I found it's caused by `batch_examples` being `{}`. I wonder if the code should be as follows:
```
- if batch_examples and len(next(iter(batch_examples.values()))) == 0:
+ if not batch_examples or len(next(iter(batch_examples.values()))) == 0:
return
```
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https://api.github.com/repos/huggingface/datasets/issues/4501 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/4501/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/4501/comments | https://api.github.com/repos/huggingface/datasets/issues/4501/events | https://github.com/huggingface/datasets/pull/4501 | 1,272,300,646 | PR_kwDODunzps45th2M | 4,501 | Corrected broken links in doc | {
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https://api.github.com/repos/huggingface/datasets/issues/4500 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/4500/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/4500/comments | https://api.github.com/repos/huggingface/datasets/issues/4500/events | https://github.com/huggingface/datasets/pull/4500 | 1,272,281,992 | PR_kwDODunzps45tdxk | 4,500 | Add `concatenate_datasets` for iterable datasets | {
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} | [] | closed | false | null | [] | null | 3 | 2022-06-15T13:58:50 | 2022-06-28T21:25:39 | 2022-06-28T21:15:04 | MEMBER | null | `concatenate_datasets` currently only supports lists of `datasets.Dataset`, not lists of `datasets.IterableDataset` like `interleave_datasets`
Fix https://github.com/huggingface/datasets/issues/2564
I also moved `_interleave_map_style_datasets` from combine.py to arrow_dataset.py, since the logic depends a lot on the `Dataset` object internals
And I moved `concatenate_datasets` from arrow_dataset.py to combine.py to have it with `interleave_datasets` (though it's also copied in arrow_dataset module for backward compatibility for now) | {
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] | closed | false | null | [] | null | 1 | 2022-06-15T11:35:12 | 2022-06-15T16:38:05 | 2022-06-15T16:38:05 | NONE | null | ## Describe the bug
It seems that in some cases in which the `prediction` is longer than the `reference` we may have word/character error rate higher than 1 which is a bit odd.
If it's a real bug I think I can solve it with a PR changing [this](https://github.com/huggingface/datasets/blob/master/metrics/wer/wer.py#L105) line to
```python
return min(incorrect / total, 1.0)
```
## Steps to reproduce the bug
```python
from datasets import load_metric
wer = load_metric("wer")
wer_value = wer.compute(predictions=["Hi World vka"], references=["Hello"])
print(wer_value)
```
## Expected results
```
1.0
```
## Actual results
```
3.0
```
## Environment info
<!-- You can run the command `datasets-cli env` and copy-and-paste its output below. -->
- `datasets` version: 2.3.0
- Platform: Linux-5.4.188+-x86_64-with-Ubuntu-18.04-bionic
- Python version: 3.7.13
- PyArrow version: 6.0.1
- Pandas version: 1.3.5 | {
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https://api.github.com/repos/huggingface/datasets/issues/4497 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/4497/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/4497/comments | https://api.github.com/repos/huggingface/datasets/issues/4497/events | https://github.com/huggingface/datasets/pull/4497 | 1,271,964,338 | PR_kwDODunzps45sYns | 4,497 | Re-add download_manager module in utils | {
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This breaks `evaluate` which imports `DownloadMode` from `datasets.utils.download_manager`
This PR re-adds `datasets.utils.download_manager` without circular imports.
We could also show a message that says that accessing it is deprecated, but I think we can do this in a subsequent PR, and just focus on doing a patch release for now | {
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https://api.github.com/repos/huggingface/datasets/issues/4496 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/4496/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/4496/comments | https://api.github.com/repos/huggingface/datasets/issues/4496/events | https://github.com/huggingface/datasets/pull/4496 | 1,271,945,704 | PR_kwDODunzps45sUnW | 4,496 | Replace `assertEqual` with `assertTupleEqual` in unit tests for verbosity | {
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} | [] | closed | false | null | [] | null | 2 | 2022-06-15T09:29:16 | 2022-07-07T17:06:51 | 2022-07-07T16:55:48 | MEMBER | null | As detailed in #4419 and as suggested by @mariosasko, we could replace the `assertEqual` assertions with `assertTupleEqual` when the assertion is between Tuples, in order to make the tests more verbose. | {
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When trying to patch `scipy.io.loadmat`:
```python
ModuleNotFoundError: No module named 'scipy'
```
Instead it shouldn't raise an error and do nothing
Bug introduced by #4375
Fix https://github.com/huggingface/datasets/issues/4494 | {
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} | [] | closed | false | null | [] | null | 0 | 2022-06-15T08:17:29 | 2022-06-15T08:54:09 | 2022-06-15T08:54:09 | MEMBER | null | Reported in https://github.com/huggingface/huggingface_hub/runs/6894703718?check_suite_focus=true
When trying to patch `scipy.io.loadmat`:
```python
ModuleNotFoundError: No module named 'scipy'
```
Instead it shouldn't raise an error and do nothing
We use patching to extend such functions to support remote URLs and work in streaming mode | {
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https://api.github.com/repos/huggingface/datasets/issues/4493 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/4493/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/4493/comments | https://api.github.com/repos/huggingface/datasets/issues/4493/events | https://github.com/huggingface/datasets/pull/4493 | 1,271,306,385 | PR_kwDODunzps45qL7J | 4,493 | Add `@transmit_format` in `flatten` | {
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} | [] | closed | false | null | [] | null | 4 | 2022-06-14T20:09:09 | 2022-09-27T11:37:25 | 2022-09-27T10:48:54 | MEMBER | null | As suggested by @mariosasko in https://github.com/huggingface/datasets/pull/4411, we should include the `@transmit_format` decorator to `flatten`, `rename_column`, and `rename_columns` so as to ensure that the value of `_format_columns` in an `ArrowDataset` is properly updated.
**Edit**: according to @mariosasko comment below, the decorator `@transmit_format` doesn't handle column renaming, so it's done manually for those instead. | {
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} | [] | closed | false | null | [] | null | 1 | 2022-06-14T17:15:17 | 2022-06-14T17:35:13 | 2022-06-14T17:25:45 | MEMBER | null | Use the commit sha in the data files URLs of the imagenet-1k download script, in case we want to restructure the data files in the future. For example we may split it into many more shards for better paralellism.
cc @mariosasko | {
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https://huggingface.co/datasets/Pavithree/test
### Description
I have extracted the subset of original eli5 dataset found at hugging face. However, while loading the dataset It throws ArrowNotImplementedError: Unsupported cast from string to null using function cast_null error. Is there anything missing from my end? Kindly help.
### Owner
_No response_ | {
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The PyTorch API of nested tensors is in the prototype stage, so wait for it to become more mature. | null | {
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PS: The older versions are not exposed as configs in the script because v1 was removed from Zenodo, and the same thing will probably happen to v2. | {
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- Adds the BCP 47 language code as feature | {
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} | [] | closed | false | null | [] | null | 8 | 2022-06-13T14:20:19 | 2022-07-04T14:37:03 | 2022-07-04T14:25:45 | NONE | null | As described in #4075
I could not generate the dummy data. Also, on the data repository isn't provided the split IDs, but I copy the functions that provide the correct data split. In summary, to have a better distribution, the data in this dataset should be separated based on the amount of NORs in each image. | {
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https://api.github.com/repos/huggingface/datasets/issues/4485 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/4485/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/4485/comments | https://api.github.com/repos/huggingface/datasets/issues/4485/events | https://github.com/huggingface/datasets/pull/4485 | 1,269,463,054 | PR_kwDODunzps45kD7A | 4,485 | Fix cast to null | {
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} | [] | closed | false | null | [] | null | 1 | 2022-06-13T13:44:32 | 2022-06-14T13:43:54 | 2022-06-14T13:34:14 | MEMBER | null | It currently fails with `ArrowNotImplementedError` instead of `TypeError` when one tries to cast integer to null type.
Because if this, type inference breaks when one replaces null values with integers in `map` (it first tries to cast to the previous type before inferring the new type).
Fix https://github.com/huggingface/datasets/issues/4483 | {
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https://api.github.com/repos/huggingface/datasets/issues/4484 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/4484/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/4484/comments | https://api.github.com/repos/huggingface/datasets/issues/4484/events | https://github.com/huggingface/datasets/pull/4484 | 1,269,383,811 | PR_kwDODunzps45jywZ | 4,484 | Better ImportError message when a dataset script dependency is missing | {
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} | [] | closed | false | null | [] | null | 4 | 2022-06-13T12:44:37 | 2022-07-08T14:30:44 | 2022-06-13T13:50:47 | MEMBER | null | When a depenency is missing for a dataset script, an ImportError message is shown, with a tip to install the missing dependencies. This message is not ideal at the moment: it may show duplicate dependencies, and is not very readable.
I improved it from
```
ImportError: To be able to use bigbench, you need to install the following dependencies['bigbench', 'bigbench', 'bigbench', 'bigbench'] using 'pip install "bigbench @ https://storage.googleapis.com/public_research_data/bigbench/bigbench-0.0.1.tar.gz" bigbench bigbench bigbench' for instance'
```
to
```
ImportError: To be able to use bigbench, you need to install the following dependency: bigbench.
Please install it using 'pip install "bigbench @ https://storage.googleapis.com/public_research_data/bigbench/bigbench-0.0.1.tar.gz"' for instance'
``` | {
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https://api.github.com/repos/huggingface/datasets/issues/4483 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/4483/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/4483/comments | https://api.github.com/repos/huggingface/datasets/issues/4483/events | https://github.com/huggingface/datasets/issues/4483 | 1,269,253,840 | I_kwDODunzps5Lp0bQ | 4,483 | Dataset.map throws pyarrow.lib.ArrowNotImplementedError when converting from list of empty lists | {
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] | null | 1 | 2022-06-13T10:47:52 | 2022-06-14T13:34:14 | 2022-06-14T13:34:14 | CONTRIBUTOR | null | ## Describe the bug
Dataset.map throws pyarrow.lib.ArrowNotImplementedError: Unsupported cast from int64 to null using function cast_null when converting from a type of 'empty lists' to 'lists with some type'.
This appears to be due to the interaction of arrow internals and some assumptions made by datasets.
The bug appeared when binarizing some labels, and then adding a dataset which had all these labels absent (to force the model to not label empty strings such with anything)
Particularly the fact that this only happens in batched mode is strange.
## Steps to reproduce the bug
```python
import numpy as np
ds = Dataset.from_dict(
{
"text": ["the lazy dog jumps over the quick fox", "another sentence"],
"label": [[], []],
}
)
def mapper(features):
features['label'] = [
[0,0,0] for l in features['label']
]
return features
ds_mapped = ds.map(mapper,batched=True)
```
## Expected results
Not crashing
## Actual results
```
../.venv/lib/python3.8/site-packages/datasets/arrow_dataset.py:2346: in map
return self._map_single(
../.venv/lib/python3.8/site-packages/datasets/arrow_dataset.py:532: in wrapper
out: Union["Dataset", "DatasetDict"] = func(self, *args, **kwargs)
../.venv/lib/python3.8/site-packages/datasets/arrow_dataset.py:499: in wrapper
out: Union["Dataset", "DatasetDict"] = func(self, *args, **kwargs)
../.venv/lib/python3.8/site-packages/datasets/fingerprint.py:458: in wrapper
out = func(self, *args, **kwargs)
../.venv/lib/python3.8/site-packages/datasets/arrow_dataset.py:2751: in _map_single
writer.write_batch(batch)
../.venv/lib/python3.8/site-packages/datasets/arrow_writer.py:503: in write_batch
arrays.append(pa.array(typed_sequence))
pyarrow/array.pxi:230: in pyarrow.lib.array
???
pyarrow/array.pxi:110: in pyarrow.lib._handle_arrow_array_protocol
???
../.venv/lib/python3.8/site-packages/datasets/arrow_writer.py:198: in __arrow_array__
out = cast_array_to_feature(out, type, allow_number_to_str=not self.trying_type)
../.venv/lib/python3.8/site-packages/datasets/table.py:1675: in wrapper
return func(array, *args, **kwargs)
../.venv/lib/python3.8/site-packages/datasets/table.py:1812: in cast_array_to_feature
casted_values = _c(array.values, feature.feature)
../.venv/lib/python3.8/site-packages/datasets/table.py:1675: in wrapper
return func(array, *args, **kwargs)
../.venv/lib/python3.8/site-packages/datasets/table.py:1843: in cast_array_to_feature
return array_cast(array, feature(), allow_number_to_str=allow_number_to_str)
../.venv/lib/python3.8/site-packages/datasets/table.py:1675: in wrapper
return func(array, *args, **kwargs)
../.venv/lib/python3.8/site-packages/datasets/table.py:1752: in array_cast
return array.cast(pa_type)
pyarrow/array.pxi:915: in pyarrow.lib.Array.cast
???
../.venv/lib/python3.8/site-packages/pyarrow/compute.py:376: in cast
return call_function("cast", [arr], options)
pyarrow/_compute.pyx:542: in pyarrow._compute.call_function
???
pyarrow/_compute.pyx:341: in pyarrow._compute.Function.call
???
pyarrow/error.pxi:144: in pyarrow.lib.pyarrow_internal_check_status
???
_ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _
> ???
E pyarrow.lib.ArrowNotImplementedError: Unsupported cast from int64 to null using function cast_null
pyarrow/error.pxi:121: ArrowNotImplementedError
```
## Workarounds
* Not using batched=True
* Using an np.array([],dtype=float) or similar instead of [] in the input
* Naming the output column differently from the input column
## Environment info
<!-- You can run the command `datasets-cli env` and copy-and-paste its output below. -->
- `datasets` version: 2.2.2
- Platform: Ubuntu
- Python version: 3.8
- PyArrow version: 8.0.0
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https://api.github.com/repos/huggingface/datasets/issues/4482 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/4482/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/4482/comments | https://api.github.com/repos/huggingface/datasets/issues/4482/events | https://github.com/huggingface/datasets/pull/4482 | 1,269,237,447 | PR_kwDODunzps45jS_c | 4,482 | Test that TensorFlow is not imported on startup | {
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} | [] | closed | false | null | [] | null | 3 | 2022-06-13T10:33:49 | 2023-10-12T06:31:39 | 2023-10-11T09:11:56 | MEMBER | null | TF takes some time to be imported, and also uses some GPU memory.
I just added a test to make sure that in the future it's never imported by default when
```python
import datasets
```
is called.
Right now this fails because `huggingface_hub` does import tensorflow (though this is fixed now on their `main` branch)
I'll mark this PR as ready for review once `huggingface_hub` has a new release | {
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https://api.github.com/repos/huggingface/datasets/issues/4481 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/4481/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/4481/comments | https://api.github.com/repos/huggingface/datasets/issues/4481/events | https://github.com/huggingface/datasets/pull/4481 | 1,269,187,792 | PR_kwDODunzps45jIRi | 4,481 | Fix iwslt2017 | {
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} | [] | closed | false | null | [] | null | 4 | 2022-06-13T09:51:21 | 2022-10-26T09:09:31 | 2022-06-13T10:40:18 | MEMBER | null | The files were moved to google drive, I hosted them on the Hub instead (ok according to the license)
I also updated the `datasets_infos.json` | {
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https://api.github.com/repos/huggingface/datasets/issues/4480 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/4480/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/4480/comments | https://api.github.com/repos/huggingface/datasets/issues/4480/events | https://github.com/huggingface/datasets/issues/4480 | 1,268,921,567 | I_kwDODunzps5LojTf | 4,480 | Bigbench tensorflow GPU dependency | {
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] | closed | false | null | [] | null | 3 | 2022-06-13T05:24:06 | 2022-06-14T19:45:24 | 2022-06-14T19:45:23 | CONTRIBUTOR | null | ## Describe the bug
Loading bigbech
```py
from datasets import load_dataset
dataset = load_dataset("bigbench","swedish_to_german_proverbs")
```
tries to use gpu and fails with OOM with the following error
```
Downloading and preparing dataset bigbench/swedish_to_german_proverbs (download: Unknown size, generated: 68.92 KiB, post-processed: Unknown size, total: 68.92 KiB) to /home/ceyda/.cache/huggingface/datasets/bigbench/swedish_to_german_proverbs/1.0.0/7d2f6e537fa937dfaac8b1c1df782f2055071d3fd8e4f4ae93d28012a354ced0...
Generating default split: 0%| | 0/72 [00:00<?, ? examples/s]2022-06-13 14:11:04.154469: I tensorflow/core/platform/cpu_feature_guard.cc:193] This TensorFlow binary is optimized with oneAPI Deep Neural Network Library (oneDNN) to use the following CPU instructions in performance-critical operations: AVX2 AVX512F FMA
To enable them in other operations, rebuild TensorFlow with the appropriate compiler flags.
2022-06-13 14:11:05.133600: F tensorflow/core/platform/statusor.cc:33] Attempting to fetch value instead of handling error INTERNAL: failed initializing StreamExecutor for CUDA device ordinal 3: INTERNAL: failed call to cuDevicePrimaryCtxRetain: CUDA_ERROR_OUT_OF_MEMORY: out of memory; total memory reported: 25396838400
Aborted (core dumped)
```
I think this is because bigbench dependency (below) installs tensorflow (GPU version) and dataloading tries to use GPU as default.
`pip install bigbench@https://storage.googleapis.com/public_research_data/bigbench/bigbench-0.0.1.tar.gz`
while just doing 'pip install bigbench' results in following error
```
File "/home/ceyda/.local/lib/python3.7/site-packages/datasets/load.py", line 109, in import_main_class
module = importlib.import_module(module_path)
File "/usr/lib/python3.7/importlib/__init__.py", line 127, in import_module
return _bootstrap._gcd_import(name[level:], package, level)
File "<frozen importlib._bootstrap>", line 1006, in _gcd_import
File "<frozen importlib._bootstrap>", line 983, in _find_and_load
File "<frozen importlib._bootstrap>", line 967, in _find_and_load_unlocked
File "<frozen importlib._bootstrap>", line 677, in _load_unlocked
File "<frozen importlib._bootstrap_external>", line 728, in exec_module
File "<frozen importlib._bootstrap>", line 219, in _call_with_frames_removed
File "/home/ceyda/.cache/huggingface/modules/datasets_modules/datasets/bigbench/7d2f6e537fa937dfaac8b1c1df782f2055071d3fd8e4f4ae93d28012a354ced0/bigbench.py", line 118, in <module>
class Bigbench(datasets.GeneratorBasedBuilder):
File "/home/ceyda/.cache/huggingface/modules/datasets_modules/datasets/bigbench/7d2f6e537fa937dfaac8b1c1df782f2055071d3fd8e4f4ae93d28012a354ced0/bigbench.py", line 127, in Bigbench
BigBenchConfig(name=name, version=datasets.Version("1.0.0")) for name in bb_utils.get_all_json_task_names()
AttributeError: module 'bigbench.api.util' has no attribute 'get_all_json_task_names'
```
## Steps to avoid the bug
Not ideal but can solve with (since I don't really use tensorflow elsewhere)
`pip uninstall tensorflow`
`pip install tensorflow-cpu`
## Environment info
- datasets @ master
- Python version: 3.7
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https://api.github.com/repos/huggingface/datasets/issues/4479 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/4479/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/4479/comments | https://api.github.com/repos/huggingface/datasets/issues/4479/events | https://github.com/huggingface/datasets/pull/4479 | 1,268,558,237 | PR_kwDODunzps45hHtZ | 4,479 | Include entity positions as feature in ReCoRD | {
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} | [] | closed | false | null | [] | null | 3 | 2022-06-12T11:56:28 | 2022-08-19T23:23:02 | 2022-08-19T13:23:48 | CONTRIBUTOR | null | https://huggingface.co/datasets/super_glue/viewer/record/validation
TLDR: We need to record entity positions, which are included in the source data but excluded by the loading script, to enable efficient and effective training for ReCoRD.
Currently, the loading script ignores the entity positions ("entity_start", "entity_end") and only records entity text. This might be because the training method of the official baseline is to make n training instance from a datapoint by replacing \"\@ placeholder\" in query with each entity individually.
But it increases the already heavy computation by multiple folds. So DeBERTa uses a method that take entity embeddings by their positions in the passage, and thus makes one training instance from one data point. It is way more efficient and proved effective for the ReCoRD task.
Can anybody help me with the dataset card rendering error? Maybe @lhoestq ? | {
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https://api.github.com/repos/huggingface/datasets/issues/4478 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/4478/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/4478/comments | https://api.github.com/repos/huggingface/datasets/issues/4478/events | https://github.com/huggingface/datasets/issues/4478 | 1,268,358,213 | I_kwDODunzps5LmZxF | 4,478 | Dataset slow during model training | {
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] | open | false | null | [] | null | 5 | 2022-06-11T19:40:19 | 2022-06-14T12:04:31 | null | NONE | null | ## Describe the bug
While migrating towards 🤗 Datasets, I encountered an odd performance degradation: training suddenly slows down dramatically. I train with an image dataset using Keras and execute a `to_tf_dataset` just before training.
First, I have optimized my dataset following /static-proxy?url=https%3A%2F%2Fdiscuss.huggingface.co%2Ft%2Fsolved-image-dataset-seems-slow-for-larger-image-size%2F10960%2F6%2C which actually improved the situation from what I had before but did not completely solve it.
Second, I saved and loaded my dataset using `tf.data.experimental.save` and `tf.data.experimental.load` before training (for which I would have expected no performance change). However, I ended up with the performance I had before tinkering with 🤗 Datasets.
Any idea what's the reason for this and how to speed-up training with 🤗 Datasets?
## Steps to reproduce the bug
```python
# Sample code to reproduce the bug
from datasets import load_dataset
import os
dataset_dir = "./dataset"
prep_dataset_dir = "./prepdataset"
model_dir = "./model"
# Load Data
dataset = load_dataset("Lehrig/Monkey-Species-Collection", "downsized")
def read_image_file(example):
with open(example["image"].filename, "rb") as f:
example["image"] = {"bytes": f.read()}
return example
dataset = dataset.map(read_image_file)
dataset.save_to_disk(dataset_dir)
# Preprocess
from datasets import (
Array3D,
DatasetDict,
Features,
load_from_disk,
Sequence,
Value
)
import numpy as np
from transformers import ImageFeatureExtractionMixin
dataset = load_from_disk(dataset_dir)
num_classes = dataset["train"].features["label"].num_classes
one_hot_matrix = np.eye(num_classes)
feature_extractor = ImageFeatureExtractionMixin()
def to_pixels(image):
image = feature_extractor.resize(image, size=size)
image = feature_extractor.to_numpy_array(image, channel_first=False)
image = image / 255.0
return image
def process(examples):
examples["pixel_values"] = [
to_pixels(image) for image in examples["image"]
]
examples["label"] = [
one_hot_matrix[label] for label in examples["label"]
]
return examples
features = Features({
"pixel_values": Array3D(dtype="float32", shape=(size, size, 3)),
"label": Sequence(feature=Value(dtype="int32"), length=num_classes)
})
prep_dataset = dataset.map(
process,
remove_columns=["image"],
batched=True,
batch_size=batch_size,
num_proc=2,
features=features,
)
prep_dataset = prep_dataset.with_format("numpy")
# Split
train_dev_dataset = prep_dataset['test'].train_test_split(
test_size=test_size,
shuffle=True,
seed=seed
)
train_dev_test_dataset = DatasetDict({
'train': train_dev_dataset['train'],
'dev': train_dev_dataset['test'],
'test': prep_dataset['test'],
})
train_dev_test_dataset.save_to_disk(prep_dataset_dir)
# Train Model
import datetime
import tensorflow as tf
from tensorflow.keras import Sequential
from tensorflow.keras.applications import InceptionV3
from tensorflow.keras.layers import Dense, Dropout, GlobalAveragePooling2D, BatchNormalization
from tensorflow.keras.callbacks import ReduceLROnPlateau, ModelCheckpoint, EarlyStopping
from transformers import DefaultDataCollator
dataset = load_from_disk(prep_data_dir)
data_collator = DefaultDataCollator(return_tensors="tf")
train_dataset = dataset["train"].to_tf_dataset(
columns=['pixel_values'],
label_cols=['label'],
shuffle=True,
batch_size=batch_size,
collate_fn=data_collator
)
validation_dataset = dataset["dev"].to_tf_dataset(
columns=['pixel_values'],
label_cols=['label'],
shuffle=False,
batch_size=batch_size,
collate_fn=data_collator
)
print(f'{datetime.datetime.now()} - Saving Data')
tf.data.experimental.save(train_dataset, model_dir+"/train")
tf.data.experimental.save(validation_dataset, model_dir+"/val")
print(f'{datetime.datetime.now()} - Loading Data')
train_dataset = tf.data.experimental.load(model_dir+"/train")
validation_dataset = tf.data.experimental.load(model_dir+"/val")
shape = np.shape(dataset["train"][0]["pixel_values"])
backbone = InceptionV3(
include_top=False,
weights='imagenet',
input_shape=shape
)
for layer in backbone.layers:
layer.trainable = False
model = Sequential()
model.add(backbone)
model.add(GlobalAveragePooling2D())
model.add(Dense(128, activation='relu'))
model.add(BatchNormalization())
model.add(Dropout(0.3))
model.add(Dense(64, activation='relu'))
model.add(BatchNormalization())
model.add(Dropout(0.3))
model.add(Dense(10, activation='softmax'))
model.compile(
optimizer='adam',
loss='categorical_crossentropy',
metrics=['accuracy']
)
print(model.summary())
earlyStopping = EarlyStopping(
monitor='val_loss',
patience=10,
verbose=0,
mode='min'
)
mcp_save = ModelCheckpoint(
f'{model_dir}/best_model.hdf5',
save_best_only=True,
monitor='val_loss',
mode='min'
)
reduce_lr_loss = ReduceLROnPlateau(
monitor='val_loss',
factor=0.1,
patience=7,
verbose=1,
min_delta=0.0001,
mode='min'
)
hist = model.fit(
train_dataset,
epochs=epochs,
validation_data=validation_dataset,
callbacks=[earlyStopping, mcp_save, reduce_lr_loss]
)
```
## Expected results
Same performance when training without my "save/load hack" or a good explanation/recommendation about the issue.
## Actual results
Performance slower without my "save/load hack".
**Epoch Breakdown (without my "save/load hack"):**
- Epoch 1/10
41s 2s/step - loss: 1.6302 - accuracy: 0.5048 - val_loss: 1.4713 - val_accuracy: 0.3273 - lr: 0.0010
- Epoch 2/10
32s 2s/step - loss: 0.5357 - accuracy: 0.8510 - val_loss: 1.0447 - val_accuracy: 0.5818 - lr: 0.0010
- Epoch 3/10
36s 3s/step - loss: 0.3547 - accuracy: 0.9231 - val_loss: 0.6245 - val_accuracy: 0.7091 - lr: 0.0010
- Epoch 4/10
36s 3s/step - loss: 0.2721 - accuracy: 0.9231 - val_loss: 0.3395 - val_accuracy: 0.9091 - lr: 0.0010
- Epoch 5/10
32s 2s/step - loss: 0.1676 - accuracy: 0.9856 - val_loss: 0.2187 - val_accuracy: 0.9636 - lr: 0.0010
- Epoch 6/10
42s 3s/step - loss: 0.2066 - accuracy: 0.9615 - val_loss: 0.1635 - val_accuracy: 0.9636 - lr: 0.0010
- Epoch 7/10
32s 2s/step - loss: 0.1814 - accuracy: 0.9423 - val_loss: 0.1418 - val_accuracy: 0.9636 - lr: 0.0010
- Epoch 8/10
32s 2s/step - loss: 0.1301 - accuracy: 0.9856 - val_loss: 0.1388 - val_accuracy: 0.9818 - lr: 0.0010
- Epoch 9/10
loss: 0.1102 - accuracy: 0.9856 - val_loss: 0.1185 - val_accuracy: 0.9818 - lr: 0.0010
- Epoch 10/10
32s 2s/step - loss: 0.1013 - accuracy: 0.9808 - val_loss: 0.0978 - val_accuracy: 0.9818 - lr: 0.0010
**Epoch Breakdown (with my "save/load hack"):**
- Epoch 1/10
13s 625ms/step - loss: 3.0478 - accuracy: 0.1146 - val_loss: 2.3061 - val_accuracy: 0.0727 - lr: 0.0010
- Epoch 2/10
0s 80ms/step - loss: 2.3105 - accuracy: 0.2656 - val_loss: 2.3085 - val_accuracy: 0.0909 - lr: 0.0010
- Epoch 3/10
0s 77ms/step - loss: 1.8608 - accuracy: 0.3542 - val_loss: 2.3130 - val_accuracy: 0.0909 - lr: 0.0010
- Epoch 4/10
1s 98ms/step - loss: 1.8677 - accuracy: 0.3750 - val_loss: 2.3157 - val_accuracy: 0.0909 - lr: 0.0010
- Epoch 5/10
1s 204ms/step - loss: 1.5561 - accuracy: 0.4583 - val_loss: 2.3049 - val_accuracy: 0.0909 - lr: 0.0010
- Epoch 6/10
1s 210ms/step - loss: 1.4657 - accuracy: 0.4896 - val_loss: 2.2944 - val_accuracy: 0.0909 - lr: 0.0010
- Epoch 7/10
1s 205ms/step - loss: 1.4018 - accuracy: 0.5312 - val_loss: 2.2917 - val_accuracy: 0.0909 - lr: 0.0010
- Epoch 8/10
1s 207ms/step - loss: 1.2370 - accuracy: 0.5729 - val_loss: 2.2814 - val_accuracy: 0.0909 - lr: 0.0010
- Epoch 9/10
1s 214ms/step - loss: 1.1190 - accuracy: 0.6250 - val_loss: 2.2733 - val_accuracy: 0.0909 - lr: 0.0010
- Epoch 10/10
1s 207ms/step - loss: 1.1484 - accuracy: 0.6302 - val_loss: 2.2624 - val_accuracy: 0.0909 - lr: 0.0010
## Environment info
- `datasets` version: 2.2.2
- Platform: Linux-4.18.0-305.45.1.el8_4.ppc64le-ppc64le-with-glibc2.17
- Python version: 3.8.13
- PyArrow version: 7.0.0
- Pandas version: 1.4.2
- TensorFlow: 2.8.0
- GPU (used during training): Tesla V100-SXM2-32GB
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] | null | 2 | 2022-06-11T15:49:17 | 2022-07-18T13:07:33 | 2022-07-18T13:07:33 | NONE | null | ### Link
_No response_
### Description
_No response_
### Owner
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] | closed | false | null | [] | null | 4 | 2022-06-10T20:25:31 | 2022-06-15T17:41:41 | 2022-06-15T17:41:41 | CONTRIBUTOR | null | **Is your feature request related to a problem? Please describe.**
I have a large dataset that I need to convert part of to pandas to do some further analysis. Calling `to_pandas` directly on it is expensive. So I thought I could simply select the columns that I want and then call `to_pandas`.
**Describe the solution you'd like**
```python
from datasets import Dataset
ds = Dataset.from_dict({'a': [1,2,3], 'b': [5,6,7], 'c': [8,9,10]})
pandas_df = ds.with_format(columns=['a', 'b']).to_pandas()
# I would expect `pandas_df` to only include a,b as column.
```
**Describe alternatives you've considered**
I could remove all columns that I don't want? But I don't know all of them in advance.
**Additional context**
I can probably make a PR with some pointers.
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https://api.github.com/repos/huggingface/datasets/issues/4475 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/4475/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/4475/comments | https://api.github.com/repos/huggingface/datasets/issues/4475/events | https://github.com/huggingface/datasets/pull/4475 | 1,267,798,451 | PR_kwDODunzps45eufw | 4,475 | Improve error message for missing pacakges from inside dataset script | {
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} | [] | closed | false | null | [] | null | 3 | 2022-06-10T16:59:36 | 2022-10-06T13:46:26 | 2022-06-13T13:16:43 | COLLABORATOR | null | Improve the error message for missing packages from inside a dataset script:
With this change, the error message for missing packages for `bigbench` looks as follows:
```
ImportError: To be able to use bigbench, you need to install the following dependencies:
- 'bigbench' using 'pip install "bigbench @ https://storage.googleapis.com/public_research_data/bigbench/bigbench-0.0.1.tar.gz"'
```
And this is how it looked before:
```
ImportError: To be able to use bigbench, you need to install the following dependencies['bigbench', 'bigbench', 'bigbench', 'bigbench'] using 'pip install "bigbench @ https://storage.googleapis.com/public_research_data/bigbench/bigbench-0.0.1.tar.gz" bigbench bigbench bigbench' for instance'
``` | {
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] | closed | false | null | [] | null | 1 | 2022-06-10T16:25:49 | 2022-06-14T14:40:32 | 2022-06-14T14:04:33 | MEMBER | null | Currently the docs about PyTorch are scattered around different pages, and we were missing a place to explain more in depth how to use and optimize a dataset for PyTorch. This PR is related to #4457 which is the TF counterpart :)
cc @Rocketknight1 we can try to align both documentations contents now I think
cc @stevhliu let me know what you think ! | {
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https://api.github.com/repos/huggingface/datasets/issues/4473 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/4473/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/4473/comments | https://api.github.com/repos/huggingface/datasets/issues/4473/events | https://github.com/huggingface/datasets/pull/4473 | 1,267,555,994 | PR_kwDODunzps45d5-R | 4,473 | Add SST-2 dataset | {
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} | [] | closed | false | null | [] | null | 5 | 2022-06-10T13:37:26 | 2022-06-13T14:11:34 | 2022-06-13T14:01:09 | MEMBER | null | Add SST-2 dataset.
Currently it is part of GLUE benchmark.
This PR adds it as a standalone dataset.
CC: @julien-c | {
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https://api.github.com/repos/huggingface/datasets/issues/4472 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/4472/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/4472/comments | https://api.github.com/repos/huggingface/datasets/issues/4472/events | https://github.com/huggingface/datasets/pull/4472 | 1,267,488,523 | PR_kwDODunzps45drcb | 4,472 | Fix 401 error for unauthticated requests to non-existing repos | {
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} | [] | closed | false | null | [] | null | 1 | 2022-06-10T12:38:11 | 2022-06-10T13:05:11 | 2022-06-10T12:55:57 | MEMBER | null | The hub now returns 401 instead of 404 for unauthenticated requests to non-existing repos.
This PR add support for the 401 error and fixes the CI fails on `master` | {
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https://api.github.com/repos/huggingface/datasets/issues/4471 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/4471/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/4471/comments | https://api.github.com/repos/huggingface/datasets/issues/4471/events | https://github.com/huggingface/datasets/issues/4471 | 1,267,475,268 | I_kwDODunzps5LjCNE | 4,471 | CI error with repo lhoestq/_dummy | {
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] | closed | false | null | [] | null | 1 | 2022-06-10T12:26:06 | 2022-06-10T13:24:53 | 2022-06-10T13:24:53 | MEMBER | null | ## Describe the bug
CI is failing because of repo "lhoestq/_dummy". See: https://app.circleci.com/pipelines/github/huggingface/datasets/12461/workflows/1b040b45-9578-4ab9-8c44-c643c4eb8691/jobs/74269
```
requests.exceptions.HTTPError: 401 Client Error: Unauthorized for url: https://huggingface.co/api/datasets/lhoestq/_dummy?full=true
```
The repo seems to no longer exist: https://huggingface.co/api/datasets/lhoestq/_dummy
```
error: "Repository not found"
```
CC: @lhoestq | {
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} | [] | closed | false | null | [] | null | 1 | 2022-06-10T08:13:25 | 2022-06-10T16:42:08 | 2022-06-10T16:32:46 | MEMBER | null | This PR replaces the URLs of data files in Google Drive with our Hub ones, once the data owners have approved to host their data on the Hub.
They also informed us that their dataset is licensed under CC BY-NC-ND. | {
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] | closed | false | null | [] | null | 1 | 2022-06-09T22:00:44 | 2022-06-14T16:22:02 | 2022-06-14T16:12:00 | MEMBER | null | This PR updates the tutorials to be more generalizable to all modalities. After reading the tutorials, a user should be able to load any type of dataset, know how to index into and slice a dataset, and do the most basic/common type of preprocessing (tokenization, resampling, applying transforms) depending on their dataset.
Other changes include:
- Removed the sections about a dataset's metadata, features, and columns because we cover this in an earlier tutorial about inspecting the `DatasetInfo` through the dataset builder.
- Separate the sharing dataset tutorial into two sections: (1) uploading via the web interface and (2) using the `huggingface_hub` library.
- Renamed some tutorials in the TOC to be more clear and specific.
- Added more text to nudge users towards joining the community and asking questions on the forums.
- If it's okay with everyone, I'd also like to remove the section about loading and using metrics since we have the `evaluate` docs now.
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https://api.github.com/repos/huggingface/datasets/issues/4467 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/4467/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/4467/comments | https://api.github.com/repos/huggingface/datasets/issues/4467/events | https://github.com/huggingface/datasets/issues/4467 | 1,266,218,358 | I_kwDODunzps5LePV2 | 4,467 | Transcript string 'null' converted to [None] by load_dataset() | {
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I am training a luxembourgish speech-recognition model in Colab with a custom dataset, including a dictionary of luxembourgish words, for example the speaken numbers 0 to 9. When preparing the dataset with the script
`ds_train1 = mydataset.map(prepare_dataset)`
the following error was issued:
```
ValueError Traceback (most recent call last)
<ipython-input-69-1e8f2b37f5bc> in <module>()
----> 1 ds_train = mydataset_train.map(prepare_dataset)
11 frames
/usr/local/lib/python3.7/dist-packages/transformers/tokenization_utils_base.py in __call__(self, text, text_pair, add_special_tokens, padding, truncation, max_length, stride, is_split_into_words, pad_to_multiple_of, return_tensors, return_token_type_ids, return_attention_mask, return_overflowing_tokens, return_special_tokens_mask, return_offsets_mapping, return_length, verbose, **kwargs)
2450 if not _is_valid_text_input(text):
2451 raise ValueError(
-> 2452 "text input must of type str (single example), List[str] (batch or single pretokenized example) "
2453 "or List[List[str]] (batch of pretokenized examples)."
2454 )
ValueError: text input must of type str (single example), List[str] (batch or single pretokenized example) or List[List[str]] (batch of pretokenized examples).
```
Debugging this problem was not easy, all transcriptions in the dataset are correct strings. Finally I discovered that the transcription string 'null' is interpreted as [None] by the `load_dataset()` script. By deleting this row in the dataset the training worked fine.
## Expected result:
transcription 'null' interpreted as 'str' instead of 'None'.
## Reproduction
Here is the code to reproduce the error with a one-row-dataset.
```
with open("null-test.csv") as f:
reader = csv.reader(f)
for row in reader:
print(row)
```
['wav_filename', 'wav_filesize', 'transcript']
['wavs/female/NULL1.wav', '17530', 'null']
```
dataset = load_dataset('csv', data_files={'train': 'null-test.csv'})
```
Using custom data configuration default-81ac0c0e27af3514
Downloading and preparing dataset csv/default to /root/.cache/huggingface/datasets/csv/default-81ac0c0e27af3514/0.0.0/433e0ccc46f9880962cc2b12065189766fbb2bee57a221866138fb9203c83519...
Downloading data files: 100%
1/1 [00:00<00:00, 29.55it/s]
Extracting data files: 100%
1/1 [00:00<00:00, 23.66it/s]
Dataset csv downloaded and prepared to /root/.cache/huggingface/datasets/csv/default-81ac0c0e27af3514/0.0.0/433e0ccc46f9880962cc2b12065189766fbb2bee57a221866138fb9203c83519. Subsequent calls will reuse this data.
100%
1/1 [00:00<00:00, 25.84it/s]
```
print(dataset['train']['transcript'])
```
[None]
## Environment info
```
!pip install datasets==2.2.2
!pip install transformers==4.19.2
``` | {
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https://api.github.com/repos/huggingface/datasets/issues/4466 | https://api.github.com/repos/huggingface/datasets | https://api.github.com/repos/huggingface/datasets/issues/4466/labels{/name} | https://api.github.com/repos/huggingface/datasets/issues/4466/comments | https://api.github.com/repos/huggingface/datasets/issues/4466/events | https://github.com/huggingface/datasets/pull/4466 | 1,266,159,920 | PR_kwDODunzps45ZLsd | 4,466 | Optimize contiguous shard and select | {
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} | [] | closed | false | null | [] | null | 3 | 2022-06-09T13:45:39 | 2022-06-14T16:04:30 | 2022-06-14T15:54:45 | MEMBER | null | Currently `.shard()` and `.select()` always create an indices mapping. However if the requested data are contiguous, it's much more optimized to simply slice the Arrow table instead of building an indices mapping. In particular:
- the shard/select operation will be much faster
- reading speed will be much faster in the resulting dataset, since it won't have to do a lookup step in the indices mapping
Since `.shard()` is also used for `.map()` with `num_proc>1`, it will also significantly improve the reading speed of multiprocessed `.map()` operations
Here is an example of speed-up:
```python
>>> import io
>>> import numpy as np
>>> from datasets import Dataset
>>> ds = Dataset.from_dict({"a": np.random.rand(10_000_000)})
>>> shard = ds.shard(num_shards=4, index=0, contiguous=True) # this calls `.select(range(2_500_000))`
>>> buf = io.BytesIO()
>>> %time dd.to_json(buf)
Creating json from Arrow format: 100%|██████████████████| 100/100 [00:00<00:00, 376.17ba/s]
CPU times: user 258 ms, sys: 9.06 ms, total: 267 ms
Wall time: 266 ms
```
while previously it was
```python
Creating json from Arrow format: 100%|███████████████████| 100/100 [00:03<00:00, 29.41ba/s]
CPU times: user 3.33 s, sys: 69.1 ms, total: 3.39 s
Wall time: 3.4 s
```
In this simple case the speed-up is x10, but @sayakpaul experienced a x100 speed-up on its data when exporting to JSON.
## Implementation details
I mostly improved `.select()`: it now checks if the input corresponds to a contiguous chunk of data and then it slices the main Arrow table (or the indices mapping table if it exists). To check if the input indices are contiguous it checks two possibilities:
- if the indices is of type `range`, it checks that start >= 0 and step = 1
- otherwise in the general case, it iterates over the indices. If all the indices are contiguous then we're good, otherwise we have to build an indices mapping.
Having to iterate over the indices doesn't cause performance issues IMO because:
- either they are contiguous and in this case the cost of iterating over the indices is much less than the cost of creating an indices mapping
- or they are not contiguous, and then iterating generally stops quickly when it first encounters the first indice that is not contiguous. | {
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} | [] | closed | false | null | [] | null | 1 | 2022-06-09T08:06:19 | 2022-06-09T14:38:36 | 2022-06-09T14:29:19 | MEMBER | null | Fix https://github.com/huggingface/datasets/issues/4462 in the case of bigbench | {
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} | [] | closed | false | null | [] | null | 1 | 2022-06-09T06:58:25 | 2022-06-09T08:43:24 | 2022-06-09T08:34:16 | MEMBER | null | This PR extends the support in streaming mode for datasets that use `xml.dom.minidom.parse`, by patching that function.
This PR adds support for streaming datasets like "Yaxin/SemEval2015".
Fix #4453. | {
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] | open | false | null | [] | null | 3 | 2022-06-08T17:31:24 | 2022-07-05T07:39:55 | null | MEMBER | null | As noticed in https://github.com/huggingface/datasets/pull/4125 when a dataset config class has a parameter that reduces the number of examples (e.g. named `max_examples`), then loading the dataset and passing `max_examples` raises `NonMatchingSplitsSizesError`.
This is because it will check for expected the number of examples of the config with the same name without taking into account the `max_examples` parameter. This can be fixed by checking the expected number of examples using the **config id** instead of name. Indeed the config id corresponds to the config name + an optional suffix that depends on the config parameters | {
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] | closed | false | null | [] | null | 4 | 2022-06-08T13:59:20 | 2024-03-25T12:58:29 | 2022-06-08T14:41:00 | NONE | null | ## Describe the bug
I have piped install datasets, but this package doesn't have these attributes: load_dataset, load_metric.
## Environment info
- `datasets` version: 1.9.0
- Platform: Linux-5.13.0-44-generic-x86_64-with-debian-bullseye-sid
- Python version: 3.6.13
- PyArrow version: 6.0.1
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} | [] | closed | false | null | [] | null | 1 | 2022-06-08T12:03:42 | 2022-06-08T12:36:24 | 2022-06-08T12:27:13 | MEMBER | null | Related to #4362. | {
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For example for tabular data, it is common to use pandas/spark/dask to process the data, and then load the data into X and y (X is an array of features and y an array of labels), then train_test_split and finally feed the data to a machine learning model.
In `datasets` the workflow is different: we use load_dataset, then map, then train_test_split (if we only have a train split) and we end up with columnar dataset splits, not formatted as X and y.
Right now, it is already possible to convert a dataset from and to pandas, but there are still many things that could improve the workflow for tabular data:
- be able to load the data into X and y
- be able to load a dataset from the output of spark or dask (as far as I know it's usually csv or parquet files on S3/GCS/HDFS etc.)
- support "unsplit" datasets explicitly, instead of putting everything in "train" by default
cc @adrinjalali @merveenoyan feel free to complete/correct this :)
Feel free to also share ideas of APIs that would be super intuitive in your opinion ! | null | {
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This PR updates the data URLs.
Fix #4452. | {
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] | null | 2 | 2022-06-06T23:13:15 | 2022-12-15T13:36:40 | 2022-06-08T07:16:16 | NONE | null | ## Describe the bug
Trying to load the `fever` dataset fails with `datasets.utils.info_utils.NonMatchingChecksumError`.
I tried with `download_mode="force_redownload"` but that did not fix the error. I also tried with `ignore_verification=True` but then that raised a `json.decoder.JSONDecodeError`.
## Steps to reproduce the bug
```python
from datasets import load_dataset
dataset = load_dataset('fever', 'v1.0') # Fails with NonMatchingChecksumError
dataset = load_dataset('fever', 'v1.0', download_mode="force_redownload") # Fails with NonMatchingChecksumError
dataset = load_dataset('fever', 'v1.0', ignore_verification=True)` # Fails with JSONDecodeError
```
## Expected results
I expect this call to return with no error raised.
## Actual results
With `ignore_verification=False`:
```
*** datasets.utils.info_utils.NonMatchingChecksumError: Checksums didn't match for dataset source files:
['https://s3-eu-west-1.amazonaws.com/fever.public/train.jsonl', 'https://s3-eu-west-1.amazonaws.com/fever.public/shared_task_dev.jsonl', 'https://s3-eu-west-1.amazonaws.com/fever.public/shared_task_dev_public.jsonl', 'https://s3-eu-west-1.amazonaws.com/fever.public/shared_task_test.jsonl', 'https://s3-eu-west-1.amazonaws.com/fever.public/paper_dev.jsonl', 'https://s3-eu-west-1.amazonaws.com/fever.public/paper_test.jsonl']
```
With `ignore_verification=True`:
```
*** json.decoder.JSONDecodeError: Expecting value: line 1 column 1 (char 0)
```
## Environment info
<!-- You can run the command `datasets-cli env` and copy-and-paste its output below. -->
- `datasets` version: 2.2.3.dev0
- Platform: Linux-4.15.0-50-generic-x86_64-with-glibc2.10
- Python version: 3.8.13
- PyArrow version: 8.0.0
- Pandas version: 1.4.2
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