"""Statistical models for biomolecular dynamics"""
from __future__ import print_function, absolute_import, division
import sys
from ..cmdline import App
from ..commands import *
from ..version import version
# the commands register themselves when they're imported


class MSMBuilderApp(App):
    def _subcommands(self):
        cmds = super(MSMBuilderApp, self)._subcommands()

        # sort the commands in some arbitrary order.
        return sorted(cmds, key=lambda e: ''.join(x.__name__ for x in e.mro()))


def main():
    try:
        app = MSMBuilderApp(name='MSMBuilder', description=__doc__)
        app.start()
    except RuntimeError as e:
        sys.exit("Error: %s" % e)
    except Exception as e:
        message = """\
An unexpected error has occurred with MSMBuilder (version %s), please
consider sending the following traceback to MSMBuilder GitHub issue tracker at:
            https://github.com/msmbuilder/msmbuilder/issues
"""
        print(message % version, file=sys.stderr)
        raise  # as if we did not catch it

if __name__ == '__main__':
    main()

"""Statistical models for biomolecular dynamics"""
from __future__ import print_function, absolute_import, division
import sys
from ..cmdline import App
from ..commands import *
from ..version import version
# the commands register themselves when they're imported

# Load external commands which register themselves
# with entry point msmbuilder.commands
from pkg_resources import iter_entry_points

for ep in iter_entry_points("msmbuilder.commands"):
    external_command = ep.load()
    # Some groups start with numbers for ordering
    # Some start with descriptions e.g. "MSM"
    # Let's set the group to start with ZZZ to put plugins last.
    external_command._group = "ZZZ-External_" + external_command._group


class MSMBuilderApp(App):
    pass


def main():
    try:
        app = MSMBuilderApp(name='MSMBuilder', description=__doc__)
        app.start()
    except RuntimeError as e:
        sys.exit("Error: %s" % e)
    except Exception as e:
        message = """\
An unexpected error has occurred with MSMBuilder (version %s), please
consider sending the following traceback to MSMBuilder GitHub issue tracker at:
            https://github.com/msmbuilder/msmbuilder/issues
"""
        print(message % version, file=sys.stderr)
        raise  # as if we did not catch it


if __name__ == '__main__':
    main()

Load plugins from entry point
Load plugins from entry point

  """Statistical models for biomolecular dynamics"""
  from __future__ import print_function, absolute_import, division
  import sys
  from ..cmdline import App
  from ..commands import *
  from ..version import version
  # the commands register themselves when they're imported
  
+ # Load external commands which register themselves
+ # with entry point msmbuilder.commands
+ from pkg_resources import iter_entry_points
+ 
+ for ep in iter_entry_points("msmbuilder.commands"):
+     external_command = ep.load()
+     # Some groups start with numbers for ordering
+     # Some start with descriptions e.g. "MSM"
+     # Let's set the group to start with ZZZ to put plugins last.
+     external_command._group = "ZZZ-External_" + external_command._group
+ 
  
  class MSMBuilderApp(App):
+     pass
-     def _subcommands(self):
-         cmds = super(MSMBuilderApp, self)._subcommands()
- 
-         # sort the commands in some arbitrary order.
-         return sorted(cmds, key=lambda e: ''.join(x.__name__ for x in e.mro()))
  
  
  def main():
      try:
          app = MSMBuilderApp(name='MSMBuilder', description=__doc__)
          app.start()
      except RuntimeError as e:
          sys.exit("Error: %s" % e)
      except Exception as e:
          message = """\
  An unexpected error has occurred with MSMBuilder (version %s), please
  consider sending the following traceback to MSMBuilder GitHub issue tracker at:
              https://github.com/msmbuilder/msmbuilder/issues
  """
          print(message % version, file=sys.stderr)
          raise  # as if we did not catch it
  
+ 
  if __name__ == '__main__':
      main()
  
Load plugins from entry point
## Code Before:
"""Statistical models for biomolecular dynamics"""
from __future__ import print_function, absolute_import, division
import sys
from ..cmdline import App
from ..commands import *
from ..version import version
# the commands register themselves when they're imported


class MSMBuilderApp(App):
    def _subcommands(self):
        cmds = super(MSMBuilderApp, self)._subcommands()

        # sort the commands in some arbitrary order.
        return sorted(cmds, key=lambda e: ''.join(x.__name__ for x in e.mro()))


def main():
    try:
        app = MSMBuilderApp(name='MSMBuilder', description=__doc__)
        app.start()
    except RuntimeError as e:
        sys.exit("Error: %s" % e)
    except Exception as e:
        message = """\
An unexpected error has occurred with MSMBuilder (version %s), please
consider sending the following traceback to MSMBuilder GitHub issue tracker at:
            https://github.com/msmbuilder/msmbuilder/issues
"""
        print(message % version, file=sys.stderr)
        raise  # as if we did not catch it

if __name__ == '__main__':
    main()

## Instruction:
Load plugins from entry point
## Code After:
"""Statistical models for biomolecular dynamics"""
from __future__ import print_function, absolute_import, division
import sys
from ..cmdline import App
from ..commands import *
from ..version import version
# the commands register themselves when they're imported

# Load external commands which register themselves
# with entry point msmbuilder.commands
from pkg_resources import iter_entry_points

for ep in iter_entry_points("msmbuilder.commands"):
    external_command = ep.load()
    # Some groups start with numbers for ordering
    # Some start with descriptions e.g. "MSM"
    # Let's set the group to start with ZZZ to put plugins last.
    external_command._group = "ZZZ-External_" + external_command._group


class MSMBuilderApp(App):
    pass


def main():
    try:
        app = MSMBuilderApp(name='MSMBuilder', description=__doc__)
        app.start()
    except RuntimeError as e:
        sys.exit("Error: %s" % e)
    except Exception as e:
        message = """\
An unexpected error has occurred with MSMBuilder (version %s), please
consider sending the following traceback to MSMBuilder GitHub issue tracker at:
            https://github.com/msmbuilder/msmbuilder/issues
"""
        print(message % version, file=sys.stderr)
        raise  # as if we did not catch it


if __name__ == '__main__':
    main()
