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1 Parent(s): 071d9d7

Update README.md

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  1. README.md +10 -10
README.md CHANGED
@@ -50,9 +50,9 @@ dataset_info:
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  features:
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  - name: ID
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  dtype: string
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- - name: Smiles
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  dtype: string
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- - name: 'Y'
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  dtype:
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  class_label:
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  names:
@@ -72,9 +72,9 @@ dataset_info:
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  features:
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  - name: ID
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  dtype: string
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- - name: Smiles
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  dtype: string
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- - name: 'Y'
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  dtype:
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  class_label:
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  names:
@@ -92,7 +92,7 @@ dataset_info:
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  num_examples: 2482
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  - config_name: Marketed_Drug
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  features:
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- - name: Smiles
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  dtype: string
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  - name: Class
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  dtype:
@@ -159,15 +159,15 @@ and inspecting the loaded dataset
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  HLM
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  DatasetDict({
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  test: Dataset({
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- features: ['ChEMBL ID (source)', 'IUPAC Names', 'Smiles', 'Class', 'Dataset'],
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  num_rows: 1131
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  })
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  train: Dataset({
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- features: ['ChEMBL ID (source)', 'IUPAC Names', 'Smiles', 'Class', 'Dataset'],,
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  num_rows: 4771
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  })
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  external: Dataset({
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- features: ['ChEMBL ID (source)', 'IUPAC Names', 'Smiles', 'Class', 'Dataset'],
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  num_rows: 111
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  })
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  })
@@ -192,13 +192,13 @@ then load, featurize, split, fit, and evaluate the a catboost model
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  split_featurised_dataset = featurise_dataset(
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  split_dataset,
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- column = "Smiles",
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  representations = load_representations_from_dicts([{"name": "morgan"}, {"name": "maccs_rdkit"}]))
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  model = load_model_from_dict({
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  "name": "cat_boost_classifier",
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  "config": {
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- "x_features": ['Smiles::morgan', 'Smiles::maccs_rdkit'],
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  "y_features": ['Class'],
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  }})
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  features:
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  - name: ID
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  dtype: string
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+ - name: SMILES
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  dtype: string
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+ - name: Y
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  dtype:
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  class_label:
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  names:
 
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  features:
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  - name: ID
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  dtype: string
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+ - name: SMILES
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  dtype: string
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+ - name: Y
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  dtype:
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  class_label:
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  names:
 
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  num_examples: 2482
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  - config_name: Marketed_Drug
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  features:
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+ - name: SMILES
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  dtype: string
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  - name: Class
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  dtype:
 
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  HLM
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  DatasetDict({
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  test: Dataset({
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+ features: ['ID','SMILES', 'Y'],
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  num_rows: 1131
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  })
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  train: Dataset({
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+ features: ['ID','SMILES', 'Y'],
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  num_rows: 4771
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  })
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  external: Dataset({
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+ features: ['ID','SMILES', 'Y'],
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  num_rows: 111
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  })
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  })
 
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  split_featurised_dataset = featurise_dataset(
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  split_dataset,
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+ column = "SMILES",
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  representations = load_representations_from_dicts([{"name": "morgan"}, {"name": "maccs_rdkit"}]))
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  model = load_model_from_dict({
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  "name": "cat_boost_classifier",
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  "config": {
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+ "x_features": ['SMILES::morgan', 'SMILES::maccs_rdkit'],
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  "y_features": ['Class'],
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  }})
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