#Overall driver options
Running mode:                           retrospective
Map projection of the LIS domain:       latlon
Number of nests:                        1
Number of surface model types:          1
Surface model types:                    LSM
Surface model output interval:          1da
Land surface model:                     none
Number of met forcing sources:          2
Blending method for forcings:           overlay
Met forcing sources:                   "NLDAS2" "MRMS"
Met forcing chosen ensemble member:     1
Topographic correction method (met forcing):  "lapse-rate and slope-aspect"
Enable spatial downscaling of precipitation:  1
Spatial interpolation method (met forcing):   "neighbor" "neighbor" 
Spatial upscaling method (met forcing):       "average" "average"
Temporal interpolation method (met forcing):  linear

#Runtime options
Forcing variables list file:            ./input/forcing_variables.txt
Output methodology:                     "2d gridspace"
Output model restart files:             1
Output data format:                     netcdf 
Output naming style:                    "3 level hierarchy"
Start mode:                             coldstart 
Starting year:                          2011 
Starting month:                            09 
Starting day:                              27
Starting hour:                             01
Starting minute:                           00
Starting second:                           0
Ending year:                            2011 
Ending month:                           11
Ending day:                             1
Ending hour:                            0
Ending minute:                             0
Ending second:                             0
Undefined value:                       -9999
Output directory:                      "OUTPUT"
Diagnostic output file:                "OUTPUT/lislog"
Number of ensembles per tile:           1

#The following options are used for subgrid tiling based on vegetation
Maximum number of surface type tiles per grid:    1
Minimum cutoff percentage (surface type tiles):   0.05
Maximum number of soil texture tiles per grid:    1
Minimum cutoff percentage (soil texture tiles):   0.05
Maximum number of soil fraction tiles per grid:   1
Minimum cutoff percentage (soil fraction tiles):  0.05
Maximum number of elevation bands per grid:       1
Minimum cutoff percentage (elevation bands):      0.05
Maximum number of slope bands per grid:           1
Minimum cutoff percentage (slope bands):          0.05
Maximum number of aspect bands per grid:          1
Minimum cutoff percentage (aspect bands):         0.05

#Processor layout
#Should match the total number of processors used
Decompose by proccesses:                .true.
Number of processors along x:           7 
Number of processors along y:           8
Halo size along x:                      0
Halo size along y:                      0

#Sub-models
Routing model:                          none
Radiative transfer model:               none
Number of application models:           0

#HYMAP router
HYMAP routing model time step:                 15mn
HYMAP routing model output interval:           1da
HYMAP routing model restart interval:          1mo
HYMAP run in ensemble mode:                    0
# method:                enter 1 - kinematic; 2 - diffusive
# linear reservoir flag: enter 1 - use; or 2 - do not use linear reservoirs
# evaporation option:    enter 1 - compute; or 2 - do not compute evapotation in floodplains
HYMAP routing method:                          kinematic
HYMAP routing model linear reservoir flag:     1
HYMAP routing model evaporation option:        2
HYMAP routing model restart file:              ./nldas_output/EXP101/NOAHMP36/Run-B/ROUTING/201401/LIS_RST_HYMAP_router_201401020000.d01.bin
HYMAP routing model start mode:                restart
HYMAP routing LIS output directory:            HYMAPTEST

#---------------------DATA ASSIMILATION ----------------------------------
#Data assimilation options
Number of data assimilation instances:  0
Data assimilation algorithm:            none
Data assimilation set:                  none
Data assimilation exclude analysis increments:      0
Data assimilation number of observation types:      1
Data assimilation output interval for diagnostics:  1da
Data assimilation output ensemble members:          0
Data assimilation output processed observations:    0
Data assimilation output innovations:               0

#Bias estimation options
Bias estimation algorithm:                 none
Bias estimation attributes file:           none
Bias estimation restart output frequency:  1da
Bias estimation start mode:                none
Bias estimation restart file:              none

#Perturbation options
Perturbations start mode:                  coldstart
Perturbations restart output interval:     1mo
Perturbations restart filename:            none
Forcing perturbation algorithm:            none
Forcing perturbation frequency:            1hr
Forcing attributes file:                   none
Forcing perturbation attributes file:      none
State perturbation algorithm:              none
State perturbation frequency:              3hr
State attributes file:                     none
State perturbation attributes file:        none
Observation perturbation algorithm:        none
Observation perturbation frequency:        6hr
Observation attributes file:               none
Observation perturbation attributes file:  none

#------------------------DOMAIN SPECIFICATION--------------------------
#Definition of Running Domain
#Specify the domain extremes in latitude and longitude
Run domain lower left lat:                29.065 
Run domain lower left lon:              -115.925
Run domain upper right lat:               38.925
Run domain upper right lon:              -107.025
Run domain resolution (dx):                0.01
Run domain resolution (dy):                0.01

#The following options list the choice of parameter maps to be used
LIS domain and parameter data file:     ./lis_input.d01.nc
Landmask data source:                   LDT
Landcover data source:                  LDT
Soil texture data source:               LDT
Soil fraction data source:              none
Soil color data source:                 none
Elevation data source:                  LDT 
Slope data source:                      LDT
Aspect data source:                     LDT
Curvature data source:                  none
LAI data source:                        none
SAI data source:                        none
Albedo data source:                     LDT
Max snow albedo data source:            LDT
Greenness data source:                  LDT
Roughness data source:                  none
Porosity data source:                   none
Ksat data source:                       none
B parameter data source:                none
Quartz data source:                     none
Emissivity data source:                 none

#--------------------------------FORCINGS----------------------------------
MRMS forcing directory:                 ./input/METFORCING/MRMS 
MRMS masking: 1 #1=YES 0=NO
MRMS mask threshold: 60.0 #RQI tolerance (Range 0-100)
MRMS mask directory: ./input/MASKS/ 

NLDAS2 forcing directory:               ./input/METFORCING/NLDAS2
NLDAS2 data center source:              "GES-DISC"
NLDAS2 use model level data:            0
NLDAS2 use model based swdown:          0
NLDAS2 use model based precip:          0
NLDAS2 use model based pressure:        0

#-----------------------LAND SURFACE MODELS--------------------------
TEMPLATE model timestep: 1hr
TEMPLATE restart output interval: 1da
TEMPLATE restate file: none
TEMPLATE model output interval: 86400ss

Noah-MP.3.6 model timestep:               15mn
Noah-MP.3.6 restart output interval:      1mo
Noah-MP.3.6 restart file:                 ./OUTPUT/MRMS_conus_intel18/SURFACEMODEL/201108/LIS_RST_NOAHMP36_201108312345.d01.nc
Noah-MP.3.6 restart file format:          netcdf
Noah-MP.3.6 landuse parameter table:      ./input/LS_PARAMETERS/noahmp_params/VEGPARM.TBL
Noah-MP.3.6 soil parameter table:         ./input/LS_PARAMETERS/noah3x_parms/SOILPARM.TBL.2017
Noah-MP.3.6 general parameter table:      ./input/LS_PARAMETERS/noahmp_params/GENPARM.TBL
Noah-MP.3.6 MP parameter table:           ./input/noahmp/MPTABLE.new
Noah-MP.3.6 number of soil layers:        4
Noah-MP.3.6 soil layer thickness:         0.1  0.3  0.6  1.0
Noah-MP.3.6 number of snow layers:        3
Noah-MP.3.6 vegetation model option:                    2  # 1=prescribed; 2=dynamic; 3=calculate; 4=maximum
Noah-MP.3.6 canopy stomatal resistance option:          1  # 1=Ball-Berry; 2=Jarvis
Noah-MP.3.6 soil moisture factor for stomatal resistance option:  1  # 1=Noah; 2=CLM; 3=SSiB
Noah-MP.3.6 runoff and groundwater option:              1  # 1=SIMGM; 2=SIMTOP; 3=Schaake96; 4=BATS
Noah-MP.3.6 surface layer drag coefficient option:      1  # 1=M-O; 2=Chen97
Noah-MP.3.6 supercooled liquid water option:            1  # 1=NY06; 2=Koren99
Noah-MP.3.6 frozen soil permeability option:            1  # 1=NY06; 2=Koren99
Noah-MP.3.6 radiation transfer option:                  1  # 1=gap=F(3D;cosz); 2=gap=0; 3=gap=1-Fveg
Noah-MP.3.6 snow surface albedo option:                 2  # 1=BATS; 2=CLASS
Noah-MP.3.6 rainfall and snowfall option:               1  # 1=Jordan91; 2=BATS; 3=Noah
Noah-MP.3.6 lower boundary of soil temperature option:  2  # 1=zero-flux; 2=Noah
Noah-MP.3.6 snow and soil temperature time scheme:      1  # 1=semi-implicit; 2=fully implicit
Noah-MP.3.6 soil color index:             4
Noah-MP.3.6 CZIL option (iz0tlnd):        0
Noah-MP.3.6 initial value of snow albedo at the last timestep:  0.2
Noah-MP.3.6 initial value of snow mass at the last timestep:    0.0
Noah-MP.3.6 initial soil temperatures:                     288.0  288.0  288.0  288.0
Noah-MP.3.6 initial total soil moistures:                    0.20   0.20   0.20   0.20
Noah-MP.3.6 initial liquid soil moistures:                   0.20   0.20   0.20   0.20
Noah-MP.3.6 initial canopy air temperature:                288.0
Noah-MP.3.6 initial canopy air vapor pressure:             261.68518
Noah-MP.3.6 initial wetted or snowed fraction of canopy:     0.0
Noah-MP.3.6 initial intercepted liquid water:                0.0
Noah-MP.3.6 initial intercepted ice mass:                    0.0
Noah-MP.3.6 initial vegetation temperature:                288.0
Noah-MP.3.6 initial ground temperature:                    288.0
Noah-MP.3.6 initial snowfall on the ground:                  0.0
Noah-MP.3.6 initial snow height:                             0.0
Noah-MP.3.6 initial snow water equivalent:                   0.0
Noah-MP.3.6 initial depth to water table:                    2.5
Noah-MP.3.6 initial water storage in aquifer:             4900.0
Noah-MP.3.6 initial water in aquifer and saturated soil:  4900.0
Noah-MP.3.6 initial lake water storage:                      0.0
Noah-MP.3.6 initial leaf mass:                               9.0
Noah-MP.3.6 initial mass of fine roots:                    500.0
Noah-MP.3.6 initial stem mass:                               3.33
Noah-MP.3.6 initial mass of wood including woody roots:    500.0
Noah-MP.3.6 initial stable carbon in deep soil:           1000.0
Noah-MP.3.6 initial short-lived carbon in shallow soil:   1000.0
Noah-MP.3.6 initial LAI:                                     0.5
Noah-MP.3.6 initial SAI:                                     0.1
Noah-MP.3.6 initial momentum drag coefficient:               0.0
Noah-MP.3.6 initial sensible heat exchange coefficient:      0.0
Noah-MP.3.6 initial snow aging term:                         0.0
Noah-MP.3.6 initial soil water content between bottom of the soil and water table:  0.0
Noah-MP.3.6 initial recharge to or from the water table when deep:                  0.0
Noah-MP.3.6 initial recharge to or from the water table when shallow:               0.0
Noah-MP.3.6 initial reference height of temperature and humidity:                   10.0

#---------------------------MODEL OUTPUT CONFIGURATION-----------------------
#Specify the list of ALMA variables that need to be featured in the
#LSM model output
Output start year:
Output start month:
Output start day:
Output start hour:
Output start minutes:
Output start seconds:

Model output attributes file:           './MODEL_OUTPUT_LIST.TBL'
