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  1. adata.h5ad +2 -2
  2. lightning_logs/version_0/events.out.tfevents.1733432720.Yoseflab-R13B.329818.13 +3 -0
  3. lightning_logs/version_0/events.out.tfevents.1733432962.Yoseflab-R13B.329818.17 +3 -0
  4. lightning_logs/version_0/events.out.tfevents.1733433331.Yoseflab-R13B.329818.21 +3 -0
  5. lightning_logs/version_0/events.out.tfevents.1733433912.Yoseflab-R13B.329818.25 +3 -0
  6. lightning_logs/version_0/events.out.tfevents.1733434700.Yoseflab-R13B.337477.5 +3 -0
  7. lightning_logs/version_0/events.out.tfevents.1733435405.Yoseflab-R13B.337477.9 +3 -0
  8. lightning_logs/version_0/events.out.tfevents.1733435854.Yoseflab-R13B.337477.13 +3 -0
  9. lightning_logs/version_0/events.out.tfevents.1733437019.Yoseflab-R13B.337477.21 +3 -0
  10. lightning_logs/version_0/events.out.tfevents.1733437295.Yoseflab-R13B.337477.25 +3 -0
  11. lightning_logs/version_0/events.out.tfevents.1733437668.Yoseflab-R13B.337477.29 +3 -0
  12. lightning_logs/version_0/events.out.tfevents.1733438915.Yoseflab-R13B.337477.37 +3 -0
  13. lightning_logs/version_0/events.out.tfevents.1733439378.Yoseflab-R13B.337477.41 +3 -0
  14. lightning_logs/version_0/events.out.tfevents.1733439507.Yoseflab-R13B.337477.45 +3 -0
  15. lightning_logs/version_0/events.out.tfevents.1733440288.Yoseflab-R13B.337477.53 +3 -0
  16. lightning_logs/version_0/hparams.yaml +1 -0
  17. lightning_logs/version_1/events.out.tfevents.1733434445.Yoseflab-R13B.337477.0 +3 -0
  18. lightning_logs/version_1/hparams.yaml +1 -0
  19. lightning_logs/version_2/events.out.tfevents.1733434470.Yoseflab-R13B.337477.1 +3 -0
  20. lightning_logs/version_2/hparams.yaml +1 -0
  21. metrics.json +5 -0
  22. model.pt +2 -2
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+ "cell_wise_cv": "| Metric | Training Value | Validation Value |\n|-------------------------|----------------|------------------|\n| Mean Absolute Error | 2.33 | 2.32 |\n| Pearson Correlation | 0.62 | 0.63 |\n| Spearman Correlation | 0.60 | 0.59 |\n| R\u00b2 (R-Squared) | 0.06 | 0.12 |",
3
+ "gene_wise_cv": "| Metric | Training Value |\n|-------------------------|----------------|\n| Mean Absolute Error | 14.88 |\n| Pearson Correlation | 0.53 |\n| Spearman Correlation | 0.59 |\n| R\u00b2 (R-Squared) | -2.06 |",
4
+ "diff_exp": "| Index | gene_f1 | lfc_mae | lfc_pearson | lfc_spearman | roc_auc | pr_auc | n_cells |\n| --- | --- | --- | --- | --- | --- | --- | --- |\n| stromal cell | 0.90 | 1.19 | 0.73 | 0.96 | 0.45 | 0.90 | 2943.00 |\n| endothelial cell | 0.82 | 1.80 | 0.61 | 0.90 | 0.37 | 0.85 | 1309.00 |\n| CD8-positive, alpha-beta memory T cell | 0.88 | 3.34 | 0.63 | 0.78 | 0.23 | 0.76 | 857.00 |\n| macrophage | 0.85 | 2.66 | 0.56 | 0.83 | 0.29 | 0.84 | 846.00 |\n| mast cell | 0.89 | 3.39 | 0.59 | 0.77 | 0.21 | 0.76 | 645.00 |\n| mature NK T cell | 0.83 | 3.99 | 0.57 | 0.72 | 0.25 | 0.75 | 605.00 |\n| T cell | 0.91 | 4.33 | 0.58 | 0.71 | 0.22 | 0.73 | 519.00 |\n| muscle cell | 0.88 | 3.53 | 0.59 | 0.78 | 0.36 | 0.79 | 437.00 |\n| CD4-positive, alpha-beta memory T cell | 0.88 | 4.71 | 0.57 | 0.66 | 0.24 | 0.71 | 339.00 |\n| CD1c-positive myeloid dendritic cell | 0.75 | 4.83 | 0.58 | 0.70 | 0.30 | 0.82 | 165.00 |\n| CD8-positive, alpha-beta cytotoxic T cell | 0.80 | 5.75 | 0.52 | 0.53 | 0.31 | 0.71 | 129.00 |\n| regulatory T cell | 0.86 | 4.99 | 0.61 | 0.64 | 0.28 | 0.77 | 126.00 |\n| epithelial cell | 0.68 | 4.68 | 0.59 | 0.71 | 0.37 | 0.71 | 106.00 |\n| naive thymus-derived CD8-positive, alpha-beta T cell | 0.79 | 5.84 | 0.54 | 0.54 | 0.29 | 0.75 | 88.00 |\n| naive thymus-derived CD4-positive, alpha-beta T cell | 0.72 | 5.28 | 0.57 | 0.57 | 0.28 | 0.71 | 71.00 |\n| melanocyte | 0.70 | 6.28 | 0.52 | 0.56 | 0.37 | 0.72 | 64.00 |\n| CD4-positive helper T cell | 0.81 | 5.73 | 0.53 | 0.52 | 0.32 | 0.74 | 59.00 |\n| Langerhans cell | 0.71 | 6.17 | 0.52 | 0.54 | 0.37 | 0.76 | 36.00 |\n| plasma cell | 0.51 | 7.36 | 0.42 | 0.40 | 0.35 | 0.75 | 24.00 |\n| CD141-positive myeloid dendritic cell | 0.68 | 6.07 | 0.56 | 0.56 | 0.27 | 0.75 | 17.00 |\n| smooth muscle cell | 0.60 | 5.81 | 0.53 | 0.50 | 0.36 | 0.68 | 13.00 |"
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