canergen commited on
Commit
d6fa832
·
verified ·
1 Parent(s): 0899d00

Upload README.md with huggingface_hub

Browse files
Files changed (1) hide show
  1. README.md +18 -18
README.md CHANGED
@@ -52,9 +52,9 @@ space might still be useful for analysis.
52
  | Metric | Training Value | Validation Value |
53
  |-------------------------|----------------|------------------|
54
  | Mean Absolute Error | 4.33 | 4.63 |
55
- | Pearson Correlation | 0.00 | -0.05 |
56
- | Spearman Correlation | 0.09 | 0.07 |
57
- | R² (R-Squared) | -147.02 | -183.16 |
58
 
59
  The gene-wise coefficient of variation summarizes how well variation between different genes is
60
  preserved by the generated model expression. This value is usually quite high.
@@ -63,10 +63,10 @@ preserved by the generated model expression. This value is usually quite high.
63
 
64
  | Metric | Training Value |
65
  |-------------------------|----------------|
66
- | Mean Absolute Error | 18.04 |
67
- | Pearson Correlation | 0.15 |
68
  | Spearman Correlation | 0.14 |
69
- | R² (R-Squared) | -15651.21 |
70
 
71
  </details>
72
 
@@ -83,18 +83,18 @@ cell-type.
83
 
84
  | Index | gene_f1 | lfc_mae | lfc_pearson | lfc_spearman | roc_auc | pr_auc | n_cells |
85
  | --- | --- | --- | --- | --- | --- | --- | --- |
86
- | macrophage | 0.06 | 2.48 | 0.01 | 0.04 | 0.50 | 0.80 | 1379.00 |
87
- | monocyte | 0.04 | 3.31 | 0.02 | 0.09 | 0.50 | 0.76 | 605.00 |
88
- | endothelial cell of hepatic sinusoid | 0.03 | 3.50 | 0.06 | 0.04 | 0.49 | 0.69 | 341.00 |
89
- | mature NK T cell | 0.08 | 5.02 | 0.00 | 0.01 | 0.52 | 0.78 | 231.00 |
90
- | neutrophil | 0.02 | 6.40 | -0.01 | 0.04 | 0.61 | 0.75 | 81.00 |
91
- | fibroblast | 0.02 | 5.19 | -0.04 | -0.04 | 0.49 | 0.63 | 70.00 |
92
- | hepatocyte | 0.16 | 7.69 | 0.01 | 0.01 | 0.52 | 0.81 | 67.00 |
93
- | liver dendritic cell | 0.08 | 8.56 | 0.10 | 0.03 | 0.48 | 0.51 | 34.00 |
94
- | T cell | 0.03 | 10.88 | -0.05 | -0.03 | 0.50 | 0.55 | 20.00 |
95
- | plasma cell | 0.03 | 11.84 | 0.02 | -0.02 | 0.48 | 0.63 | 19.00 |
96
- | intrahepatic cholangiocyte | 0.05 | 9.51 | -0.00 | 0.00 | 0.50 | 0.56 | 11.00 |
97
- | erythrocyte | 0.07 | 24.40 | 0.01 | -0.01 | 0.43 | 0.87 | 2.00 |
98
 
99
  </details>
100
 
 
52
  | Metric | Training Value | Validation Value |
53
  |-------------------------|----------------|------------------|
54
  | Mean Absolute Error | 4.33 | 4.63 |
55
+ | Pearson Correlation | -0.01 | -0.04 |
56
+ | Spearman Correlation | 0.09 | 0.08 |
57
+ | R² (R-Squared) | -154.03 | -184.25 |
58
 
59
  The gene-wise coefficient of variation summarizes how well variation between different genes is
60
  preserved by the generated model expression. This value is usually quite high.
 
63
 
64
  | Metric | Training Value |
65
  |-------------------------|----------------|
66
+ | Mean Absolute Error | 18.05 |
67
+ | Pearson Correlation | 0.14 |
68
  | Spearman Correlation | 0.14 |
69
+ | R² (R-Squared) | -15510.03 |
70
 
71
  </details>
72
 
 
83
 
84
  | Index | gene_f1 | lfc_mae | lfc_pearson | lfc_spearman | roc_auc | pr_auc | n_cells |
85
  | --- | --- | --- | --- | --- | --- | --- | --- |
86
+ | macrophage | 0.08 | 2.47 | 0.02 | 0.05 | 0.48 | 0.80 | 1379.00 |
87
+ | monocyte | 0.07 | 3.31 | 0.07 | 0.10 | 0.51 | 0.77 | 605.00 |
88
+ | endothelial cell of hepatic sinusoid | 0.00 | 3.51 | -0.04 | -0.01 | 0.49 | 0.70 | 341.00 |
89
+ | mature NK T cell | 0.03 | 5.02 | 0.03 | 0.01 | 0.50 | 0.76 | 231.00 |
90
+ | neutrophil | 0.05 | 6.40 | 0.00 | 0.05 | 0.61 | 0.74 | 81.00 |
91
+ | fibroblast | 0.02 | 5.19 | 0.01 | -0.00 | 0.51 | 0.65 | 70.00 |
92
+ | hepatocyte | 0.09 | 7.69 | 0.03 | 0.02 | 0.50 | 0.80 | 67.00 |
93
+ | liver dendritic cell | 0.09 | 8.67 | 0.05 | 0.04 | 0.49 | 0.52 | 34.00 |
94
+ | T cell | 0.03 | 10.88 | -0.07 | -0.05 | 0.51 | 0.57 | 20.00 |
95
+ | plasma cell | 0.04 | 11.87 | -0.00 | -0.02 | 0.49 | 0.62 | 19.00 |
96
+ | intrahepatic cholangiocyte | 0.03 | 9.52 | -0.00 | 0.01 | 0.50 | 0.56 | 11.00 |
97
+ | erythrocyte | 0.02 | 24.50 | -0.01 | -0.02 | 0.41 | 0.87 | 2.00 |
98
 
99
  </details>
100