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README.md
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## General:
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This Vision Transformer model has been fine-tuned on
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We will include more technical details here soon.
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[tba]
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## General:
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This Vision Transformer model has been fine-tuned on BPS Microscopy data. The images used are available here:
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[Biological and Physical Sciences (BPS) Microscopy Benchmark Training Dataset](https://registry.opendata.aws/bps_microscopy/) or as a Huggingface dataset here:
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[kenobi/GeneLab_BPS_BenchmarkData](https://huggingface.co/datasets/kenobi/GeneLab_BPS_BenchmarkData).
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This is a Vision Transformer model trained on Fluorescence microscopy images of individual nuclei from mouse fibroblast cells,
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to classofy DNA damage caused by cell irradiation with Fe particles or X-rays.
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We aim to highlight the ease of use of the HuggingFace platform, integration with popular deep learning frameworks such as PyTorch, TensorFlow, or JAX,
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performance monitoring with Weights and Biases, and the ability to effortlessly utilize pre-trained large scale Transformer models for targeted fine-tuning purposes.
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This is to our knowledge the first Vision Transformer model on NASA Genelab data and we are working on additional versions to address challenges in this domain.
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We will include more technical details here soon.
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