Mughal–Rajput Wars
The Mughal–Rajput Wars were a series of battles fought between the Rajput Confederacy and the Mughal Empire which started with the Timurid ruler Babur's invasion of northwestern India and the head of the Rajput confederacy Rana Sanga's resistance to it. In 1526, when Babur invaded Hindustan, he faced stiff resistance from Rana Sanga in the Battle of Bayana, but defeated Rana in the Battle of Khanwa in 1527. The wars were, however, continued by the Rajput states, also by the descendants of both Rana Sanga and Babur. Babur's grandson Emperor Akbar the Great faced heavy resistance from Rana Udai Singh II and Rana Pratap. But in 1576 Akbar achieved a decisive victory in the Battle of Haldighati led by Man Singh I, a Rujput descent turned ally of the Mughal Empire. The victory led to tremendous gains for the Mughal Empire. Subsequently Mughals and Rajputs established a peaceful relation with Emperor Akbar accepting many Rajput leaders into Mughal court and giving them top political positions. The peace established during the time of Emperor Akbar was broken by the religious intolerant policies of his great grandson Aurangzeb. In 1679, the States of Mewar and Marwar rebelled against Aurangzeb. While a peace treaty was signed with Mewar after a year, war with Marwar went on until the death of Aurangzeb and concluded with the capture of Marwar by Rathore forces following Aurangzeb's death. Since the time of Emperor Aurangzeb his hardline Islamism policies isolated his non-Muslim allies and the power of the Mughal Military had greatly diminished by the time of his death in 1707. Shortly after his death, during the Rajput rebellion of 1708–10, the Mughals were forced to accept a humiliating peace treaty with the Rajput Rajas. The Rajputs forced the Mughals to make them governors of Malwa, Sindh and Gujarat In later years the declining Mughal Empire tried to collect taxes in Rajputana during the late 18th century, however they were met with resistance in every town and village, leading to unsuccessful invasions by the Mughal generals. These campaigns affected the Mughal Empire financially and caused arrears and the disbanding of large amounts of troops. The Mughal capital itself was affected, leaving only a few retainers to guard the palace and man the artillery. Battles

Early Mughal-Rajput Wars (1527–1616)
 Battle of Bayana
Rana Sanga led the Rajput army and besieged the fortress of Bayana held by the Afghans under Nizam Khan in February 1527. Mughal Emperor Babur sent a Mughal contingent under Abdil Aziz, which was defeated by Rana Sanga. Battle of Khanwa
The Rajput Confederacy under Rana Sanga was defeated by Babur in 1527. This was the largest battle ever between the Mughals and the Rajputs involving a total of more than 150,000 soldiers and resulted in massive territorial expansions for the Mughal Empire. Siege of Chanderi 
Babur besieged and captured Chanderi Fort in Malwa and its ruler Medini Rai was defeated and killed. Siege of Bikaner
Rao Jaitsi of Bikaner successfully defended his capital and defeated a Mughal army under Kamran, brother of Mughal emperor Humayun. Siege of Chittorgarh
Akbar led the Mughal army in besieging the famed Chittorgarh fort in 1567, which was then under the command of Jaimal Rathore and Patta Singh Sisodia, commanders of Udai Singh. The siege went on for four months, with the fortress walls being breached after the death of Jaimal, ensuring that the Mughals emerged victorious. Siege of Ranthambore (1568)
Rao Surjan Hada had to surrender Ranthambore Fort to Akbar after the latter successfully put the fort under siege. Battle of Haldighati
The Mughal army under the command of Man Singh defeated Maharana Pratap's Mewari army in the field of Haldighati in 1576. Gogunda was annexed by the Mughals. Battle of Dewair
Both Amar Singh I and Asaf Khan claimed victory in an indecisive battle. III in 1606
 Mughal conquest of Mewar, Amar Singh I surrendered to Shah Jahan in 1615. The Mughals achieved victory the following year in 1616. Later Mughal-Rajput Wars (1679–1779)
 Rajput War (1679–1707) – A war between the Rathores and the Mughals that lasted for almost 30 years. The war was a result of Mughal Emperor Aurangzeb's religious intolerant policies that broke years long peace between the Mughals and the Rajputs. Battle of Khanana (1681–1687) – Rathore rebels under Veer Durgadas Rathore defeated Mughal force. This battle resulted in major victory for Rathores. Kumpawat rathores captured Siwana town from Mughals. Mughal Commander Purdil Khan was killed in this battle. Battle of Ajmer (1690) – Veer Durgadas Rathore defeated Safi khan. Battle of Jodhpur (1707) – Veer Durgadas Rathore took advantage of the disturbances following the death of Aurangzeb in 1707 to seize Jodhpur and eventually evict the occupying Mughal force out of Marwar. Rajput Rebellion 1708-1710
July 1708 – Jai Singh and Ajit Singh storm Amber and Jodhpur and retake their capitals from the Mughal garrisons. 4–7 October 1708 – Battle of Kama – Ajit Singh Kachwaha, the Rajput zamindar of Kama defeated the combined armies of Mughal and Jats. The Mughal-Jat army numbered 18,000 while the Kachwahas had 10,000 horsemen. After a bitter fight the Mughal Fauzdar Raza Bahadur was killed and the injured Churaman retreated to Thun. October 1708 – Sayyid Hussain Barha of Mewat and Churaman Jat defeated near Sambhar by the Rathore–Kachhwaha army. Barha shot dead with his two brothers. January 1710 – Mir Khan of Narnaul with 7000 Mughal troops and Churaman Jat with 6000 Jats effectively checked by Gaj Singh Naruka at Javli. 24 March 1710 – Battle of Tonk – Muhammad Khan of Tonk defeated by the Rathor–Kachwaha army. Battle of Bandanwara
Sangram Singh II of Mewar along with other Rajput chiefs defeated the imperial Mughal army
 Battle of Gangwana
The Battle of Gangwana was a military engagement fought between the Kingdom of Marwar and a combined army of the Jaipur Kingdom and the Mughal Empire in 1741. Battle of Mandan
The Shekhawati Rajputs defeated a Mughal force under Mitra Sen Ahir, Peero Khan and Kale Khan. After heavy losses Peero Khan died while  Mitra Sen Ahir fled. Siege of Kanud
A small garrison of 400 Rajputs under the ailing Nawal Singh Shekhawat repelled Mughal attacks until Nawal died from his illness. The mughals negotiated with the Rajputs and exchanged Kanud fort for other villages, which were given to Nawal's widow. Battle of Khatu Shyamji: Devi Singh Shekhawat repelled the imperial Mughal army under Murtaza Khan Bhadech, but top Rajput leader Mahant Mangal Das was also killed in the battle with no territorial changes in 1779. 