Thats a unique idea.You should consider the following idea to enhance your idea so that it would impact uniquely:  developed a multithreaded parallel implementation of a sequence alignment algorithm that is able to align whole genomes with reliable output and reasonable cost.  presents a performance evaluation of the whole genome comparison tool called ATGC — Another Tool for Genome Comparison, on a Hyper-Threading multiprocessor.  use our application to determine the system scalability for this partic- ular type of sequence comparison algorithm and the improvement due to Hyper-Threading technology. The experimental results show that de- spite of placing a great demand on the memory system, the multithreaded code generated by Intel compiler yields to a 3.3 absolute speedup on a quad-processor machine, with parallelization guided by OpenMP prag- mas. Additionally, a relatively high 1 st level cache miss rate of 7-8% and a lack of memory bandwidth prevent logical processors with hyper- threading technology enabled from achieving further improvement.
['Juan del Cuvillo', 'Xinmin Tian', 'Guang R. Gao', 'Milind Girkar']
I am writing a research paper on a idea Performance Study of a Whole Genome Comparison Tool on a Hyper-Threading Multiprocessor
[{"from": "human", "value": "I am writing a research paper on a idea Performance Study of a Whole Genome Comparison Tool on a Hyper-Threading Multiprocessor"}, {"from": "gpt", "value": "Thats a unique idea.You should consider the following idea to enhance your idea so that it would impact uniquely:  developed a multithreaded parallel implementation of a sequence alignment algorithm that is able to align whole genomes with reliable output and reasonable cost.  presents a performance evaluation of the whole genome comparison tool called ATGC \u2014 Another Tool for Genome Comparison, on a Hyper-Threading multiprocessor.  use our application to determine the system scalability for this partic- ular type of sequence comparison algorithm and the improvement due to Hyper-Threading technology. The experimental results show that de- spite of placing a great demand on the memory system, the multithreaded code generated by Intel compiler yields to a 3.3 absolute speedup on a quad-processor machine, with parallelization guided by OpenMP prag- mas. Additionally, a relatively high 1 st level cache miss rate of 7-8% and a lack of memory bandwidth prevent logical processors with hyper- threading technology enabled from achieving further improvement."}]