Thats a unique idea.You should consider the following idea to enhance your idea so that it would impact uniquely: Summary: Motif discovery is an important topic in computational transcriptional regulation studies. In the past decade, many researchers have contributed to the field and many de novo motif-finding tools have been developed, each may have a different strength. Hover, most of these tools do not have a user-friendly interface and their results are not easily comparable.  present a software called Toolbox of Motif Discovery (Tmod) for Windows operating systems. The current version of Tmod integrates 12 widely used motif discovery programs: MDscan, BioProspector, AlignACE, Gibbs Motif Sampler, MEME, CONSENSUS, MotifRegressor, GLAM, MotifSampler, SeSiMCMC, eder and YMF. Tmod provides a unified interface to ease the use of these programs and help users to understand the tuning parameters. It allows plug-in motif-finding programs to run either separately or in a batch mode with predetermined parameters, and provides a summary comprising of outputs from multiple programs. Tmod is developed in C++ with the support of Microsoft Foundation Classes and Cygwin. Tmod can also be easily expanded to include future algorithms.#R##N##R##N#Availability: Tmod is available for download at http://www.fas.harvard.edu/~junliu/Tmod/#R##N##R##N#Contact: nc.ude.tdun@56iewhx; ude.dravrah.tats@uilj
['Hanchang Sun', 'Yuan Yuan', 'Yibo Wu', 'Hui Liu', 'Jun S. Liu', 'Hongwei Xie']
I am writing a research paper on a idea Tmod: toolbox of motif discovery
[{"from": "human", "value": "I am writing a research paper on a idea Tmod: toolbox of motif discovery"}, {"from": "gpt", "value": "Thats a unique idea.You should consider the following idea to enhance your idea so that it would impact uniquely: Summary: Motif discovery is an important topic in computational transcriptional regulation studies. In the past decade, many researchers have contributed to the field and many de novo motif-finding tools have been developed, each may have a different strength. Hover, most of these tools do not have a user-friendly interface and their results are not easily comparable.  present a software called Toolbox of Motif Discovery (Tmod) for Windows operating systems. The current version of Tmod integrates 12 widely used motif discovery programs: MDscan, BioProspector, AlignACE, Gibbs Motif Sampler, MEME, CONSENSUS, MotifRegressor, GLAM, MotifSampler, SeSiMCMC, eder and YMF. Tmod provides a unified interface to ease the use of these programs and help users to understand the tuning parameters. It allows plug-in motif-finding programs to run either separately or in a batch mode with predetermined parameters, and provides a summary comprising of outputs from multiple programs. Tmod is developed in C++ with the support of Microsoft Foundation Classes and Cygwin. Tmod can also be easily expanded to include future algorithms.#R##N##R##N#Availability: Tmod is available for download at http://www.fas.harvard.edu/~junliu/Tmod/#R##N##R##N#Contact: nc.ude.tdun@56iewhx; ude.dravrah.tats@uilj"}]