Cleaned PDB data

README.md

@@ -11,17 +11,17 @@ pretty_name: PDB
 ---
 
 # PDB
-	upload_date: 2023-07-28 13:36:23
+	upload_date: 2023-11-22 14:34:34
 	user: alberic
-	source: `` (CT files format)
+	source: `CT_files_pdbee` (CT files format)
 
 	Data types:
 	- structure (Read from source.)
 
 	Filtering report: 
-	Over a total of 958 datapoints, there are:
-    - 786 valid datapoints
+	Over a total of 702 datapoints, there are:
+    - 353 valid datapoints
     - 0 invalid datapoints (ex: sequence with non-regular characters)
     - 0 datapoints with the same reference
-    - 121 duplicate sequences with the same structure / dms
-    - 51 duplicate sequences with different structure / dms
+    - 302 duplicate sequences with the same structure / dms
+    - 47 duplicate sequences with different structure / dms

info.json

@@ -1,9 +1,9 @@
 {
     "name": "PDB",
-    "upload_date": "2023-07-28 13:36:23",
+    "upload_date": "2023-11-22 14:34:34",
     "user": "alberic",
-    "source": "`` (CT files format)",
+    "source": "`CT_files_pdbee` (CT files format)",
     "structure": "source",
     "about structure": "Read from source.",
-    "filtering_report": "Over a total of 958 datapoints, there are:\n    - 786 valid datapoints\n    - 0 invalid datapoints (ex: sequence with non-regular characters)\n    - 0 datapoints with the same reference\n    - 121 duplicate sequences with the same structure / dms\n    - 51 duplicate sequences with different structure / dms"
+    "filtering_report": "Over a total of 702 datapoints, there are:\n    - 353 valid datapoints\n    - 0 invalid datapoints (ex: sequence with non-regular characters)\n    - 0 datapoints with the same reference\n    - 302 duplicate sequences with the same structure / dms\n    - 47 duplicate sequences with different structure / dms"
 }

source/CT_files_pdbee/157D-2D.ct

@@ -0,0 +1,25 @@
+24 157D-2D
+1 c 0 2 24 1
+2 G 1 3 23 2
+3 C 2 4 22 3
+4 G 3 5 0 4
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+18 A 5 7 7 18
+19 U 6 8 6 19
+20 U 7 9 5 20
+21 A 8 10 0 21
+22 G 9 11 3 22
+23 C 10 12 2 23
+24 G 11 0 1 24

source/CT_files_pdbee/165D-2D.ct

@@ -0,0 +1,19 @@
+18 165D-2D
+1 g 0 2 17 1
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+3 U 2 4 15 3
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+17 C 7 9 1 17
+18 u 8 0 0 18

source/CT_files_pdbee/1DUH-2D.ct

@@ -0,0 +1,46 @@
+45 1DUH-2D
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+44 A 43 45 0 74
+45 g 44 0 0 75

source/CT_files_pdbee/1EHZ-2D.ct

@@ -0,0 +1,77 @@
+76 1EHZ-2D
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source/CT_files_pdbee/1ET4-2D.ct

@@ -0,0 +1,71 @@
+70 1ET4-2D
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source/CT_files_pdbee/1EVV-2D.ct

@@ -0,0 +1,77 @@
+76 1EVV-2D
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source/CT_files_pdbee/1F1T-2D.ct

@@ -0,0 +1,39 @@
+38 1F1T-2D
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+38 C 37 0 1 38

source/CT_files_pdbee/1FUF-2D.ct

@@ -0,0 +1,29 @@
+28 1FUF-2D
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source/CT_files_pdbee/1G2J-2D.ct

@@ -0,0 +1,9 @@
+8 1G2J-2D
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source/CT_files_pdbee/1GID-2D.ct

@@ -0,0 +1,317 @@
+316 1GID-2D
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source/CT_files_pdbee/1HR2-2D.ct

@@ -0,0 +1,317 @@
+316 1HR2-2D
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source/CT_files_pdbee/1I9X-2D.ct

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source/CT_files_pdbee/1J9H-2D.ct

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source/CT_files_pdbee/1KD3-2D.ct

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source/CT_files_pdbee/1KD4-2D.ct

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source/CT_files_pdbee/1KD5-2D.ct

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source/CT_files_pdbee/1KFO-2D.ct

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source/CT_files_pdbee/1L2X-2D.ct

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source/CT_files_pdbee/1L3D-2D.ct

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source/CT_files_pdbee/1L3Z-2D.ct

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source/CT_files_pdbee/1LC4-2D.ct

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source/CT_files_pdbee/1MDG-2D.ct

@@ -0,0 +1,7 @@
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source/CT_files_pdbee/1MSY-2D.ct

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source/CT_files_pdbee/1MWL-2D.ct

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source/CT_files_pdbee/1NLC-2D.ct

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source/CT_files_pdbee/1O3Z-2D.ct

@@ -0,0 +1,47 @@
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source/CT_files_pdbee/1O9M-2D.ct

@@ -0,0 +1,45 @@
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source/CT_files_pdbee/1OSU-2D.ct

@@ -0,0 +1,7 @@
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source/CT_files_pdbee/1P79-2D.ct

@@ -0,0 +1,7 @@
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source/CT_files_pdbee/1Q93-2D.ct

@@ -0,0 +1,55 @@
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source/CT_files_pdbee/1Q96-2D.ct

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source/CT_files_pdbee/1Q9A-2D.ct

@@ -0,0 +1,28 @@
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source/CT_files_pdbee/1QBP-2D.ct

@@ -0,0 +1,31 @@
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source/CT_files_pdbee/1RNA-2D.ct

@@ -0,0 +1,29 @@
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source/CT_files_pdbee/1RXA-2D.ct

@@ -0,0 +1,9 @@
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source/CT_files_pdbee/1RXB-2D.ct

@@ -0,0 +1,17 @@
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source/CT_files_pdbee/1SA9-2D.ct

@@ -0,0 +1,17 @@
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source/CT_files_pdbee/1SAQ-2D.ct

@@ -0,0 +1,17 @@
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source/CT_files_pdbee/1U9S-2D.ct

@@ -0,0 +1,161 @@
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source/CT_files_pdbee/1WVD-2D.ct

@@ -0,0 +1,47 @@
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