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This is the "sentence":

> 暴力は悪*だと非難する| condemn violence as evil

Sounds simple? The English translation does not give a subject so I wonder are
either が or をcorrect if I modify the sentence as follows:

> 彼らは暴力 [が/を] 悪だと非難した ｜They condemned violence as evil.

I think を is consistent with the pattern in the following two sentences so I
suspect that is the natural choice and although が is also grammatically
correct it is not used.

> 彼らは彼を無能だと非難した| They blamed him for incompetence
>
> 彼は私を不注意だと批判した| He criticised me for being careless

If が is the natural choice then I anticipate this will relate to the nature of
the combinations of 暴力＆悪；彼＆無能：私＆不注意 but I'd be grateful if someone could
explain this.

All these came from プログレッシブ英和・和英辞典.

*As a secondary question is this 悪 read as あく or わる？
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grammar usage
Is this は replacing が or を? (& is this 悪 read as あく or わる？）
Whether it contains the subject or not, it's natural to mark 暴力 with は because
it's a general statement to say that violence is evil. Otherwise it
(especially が) would connote that violence being evil is occasional or
violence is more evil than the other things. (If that is the case, it's
natural on its own.)
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What we have here is a case of embedded sentences using the quotative particle
と. The first sentence is as follows:

> 暴力は悪だ Violence is evil.

The speaker's intent is to condemn **all** violence, so the use of は here is
appropriate. Looking at the other part separately, we get:

> Xと非難する to condemn X

While we usually think of the particle と in combination with the verbs 話す, 言う,
and 思う, the truth is that it can be used with any verb where you are acting on
a full or partial expression (e.g. 暴力は悪だと分かるんだが・・・). In these cases, the use
of は or が does not change to fit the larger sentence because the particle と is
shielding it from the larger sentence's influence.

As to the question about 悪, it's typically read as あく when it stands alone as
a noun. As ZhenLin pointed out in the comments, わる most often appears in 訓読み
compounds (e.g. 悪気【わるぎ】 "ill will") or other stem-related derivatives (e.g.
悪さ【わるさ】 "badness").
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_(Answer based on information received in chat on 15 June 2014)_

In the examples given either を or が would be correct.

In Japanese, linguists call certain verbs (like 言う) "exceptional case marking
verbs" (ECM verbs), and these verbs allow "raising to object", where the
subject of the と-clause becomes the object of the main clause. For example:

> 花子は [ 彼が 嘘つきだ ]-と 思っている。  
>  花子は 彼を [ 嘘つきだ ]-と 思っている。 ← SUBJECT is "raised" out of the と-clause to
> OBJECT of the main clause

This is also referred to as "subject raising".

A number of theories have been put forward to explain how/when this can be
done but it remains a matter of discussion. The are summarised in the paper
"Semantic constraints on the subject-to-object raising (ECM) construction in
Japanese" (Link: <http://vsarpj.orinst.ox.ac.uk/files/horn.eals.pdf>)

(Re: わる vs あく； see link in 3rd comment below question from Snailboat.)
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