Ensembl Genomes is a scientific project to provide genome-scale data from non-vertebrate species. The project is run by the European Bioinformatics Institute, and was launched in 2009 using the Ensembl technology.nsembl Genomes is an open project, and most of the code, tools, and data are available to the public. Ensembl and Ensembl Genomes software uses a permissive Apache-style open-source license, making it free for all users.