import * as t from 'io-ts' ; import { RTTI_id } from '../Scalar/RTTI_id' ; import { RTTI_Meta , IMeta } from './RTTI_Meta' ; import { RTTI_uri } from '../Scalar/RTTI_uri' ; import { RTTI_Element , IElement } from './RTTI_Element' ; import { RTTI_code } from '../Scalar/RTTI_code' ; import { RTTI_Narrative , INarrative } from './RTTI_Narrative' ; import { RTTI_ResourceList , IResourceList } from '../Union/RTTI_ResourceList' ; import { RTTI_Extension , IExtension } from './RTTI_Extension' ; import { RTTI_Identifier , IIdentifier } from './RTTI_Identifier' ; import { RTTI_CodeableConcept , ICodeableConcept } from './RTTI_CodeableConcept' ; import { RTTI_Reference , IReference } from './RTTI_Reference' ; import { RTTI_dateTime } from '../Scalar/RTTI_dateTime' ; import { RTTI_Specimen_Collection , ISpecimen_Collection } from './RTTI_Specimen_Collection' ; import { RTTI_Specimen_Processing , ISpecimen_Processing } from './RTTI_Specimen_Processing' ; import { RTTI_Specimen_Container , ISpecimen_Container } from './RTTI_Specimen_Container' ; import { RTTI_Annotation , IAnnotation } from './RTTI_Annotation' ; export enum SpecimenStatusKind { _available = 'available' , _unavailable = 'unavailable' , _unsatisfactory = 'unsatisfactory' , _enteredInError = 'entered-in-error' } import { createEnumType } from '../../EnumType' ; import { IDomainResource } from './IDomainResource' ; export interface ISpecimen extends IDomainResource { /**
     * This is a Specimen resource
     */ resourceType : 'Specimen' ; /**
     * The logical id of the resource, as used in the URL for the resource. Once assigned, this value never changes.
     */ id ? : string ; /**
     * The metadata about the resource. This is content that is maintained by the infrastructure. Changes to the content might not always be associated with version changes to the resource.
     */ meta ? : IMeta ; /**
     * A reference to a set of rules that were followed when the resource was constructed, and which must be understood when processing the content. Often, this is a reference to an implementation guide that defines the special rules along with other profiles etc.
     */ implicitRules ? : string ; /**
     * Extensions for implicitRules
     */ _implicitRules ? : IElement ; /**
     * The base language in which the resource is written.
     */ language ? : string ; /**
     * Extensions for language
     */ _language ? : IElement ; /**
     * A human-readable narrative that contains a summary of the resource and can be used to represent the content of the resource to a human. The narrative need not encode all the structured data, but is required to contain sufficient detail to make it "clinically safe" for a human to just read the narrative. Resource definitions may define what content should be represented in the narrative to ensure clinical safety.
     */ text ? : INarrative ; /**
     * These resources do not have an independent existence apart from the resource that contains them - they cannot be identified independently, and nor can they have their own independent transaction scope.
     */ contained ? : IResourceList [ ] ; /**
     * May be used to represent additional information that is not part of the basic definition of the resource. To make the use of extensions safe and manageable, there is a strict set of governance  applied to the definition and use of extensions. Though any implementer can define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension.
     */ extension ? : IExtension [ ] ; /**
                     * May be used to represent additional information that is not part of the basic definition of the resource and that modifies the understanding of the element that contains it and/or the understanding of the containing element's descendants. Usually modifier elements provide negation or qualification. To make the use of extensions safe and manageable, there is a strict set of governance applied to the definition and use of extensions. Though any implementer is allowed to define an extension, there is a set of requirements that SHALL be met as part of the definition of the extension. Applications processing a resource are required to check for modifier extensions.

Modifier extensions SHALL NOT change the meaning of any elements on Resource or DomainResource (including cannot change the meaning of modifierExtension itself).
                     */ modifierExtension ? : IExtension [ ] ; /**
     * Id for specimen.
     */ identifier ? : IIdentifier [ ] ; /**
     * The identifier assigned by the lab when accessioning specimen(s). This is not necessarily the same as the specimen identifier, depending on local lab procedures.
     */ accessionIdentifier ? : IIdentifier ; /**
     * The availability of the specimen.
     */ status ? : SpecimenStatusKind ; /**
     * Extensions for status
     */ _status ? : IElement ; /**
     * The kind of material that forms the specimen.
     */ type ? : ICodeableConcept ; /**
     * Where the specimen came from. This may be from patient(s), from a location (e.g., the source of an environmental sample), or a sampling of a substance or a device.
     */ subject ? : IReference ; /**
     * Time when specimen was received for processing or testing.
     */ receivedTime ? : string ; /**
     * Extensions for receivedTime
     */ _receivedTime ? : IElement ; /**
     * Reference to the parent (source) specimen which is used when the specimen was either derived from or a component of another specimen.
     */ parent ? : IReference [ ] ; /**
     * Details concerning a service request that required a specimen to be collected.
     */ request ? : IReference [ ] ; /**
     * Details concerning the specimen collection.
     */ collection ? : ISpecimen_Collection ; /**
     * Details concerning processing and processing steps for the specimen.
     */ processing ? : ISpecimen_Processing [ ] ; /**
     * The container holding the specimen.  The recursive nature of containers; i.e. blood in tube in tray in rack is not addressed here.
     */ container ? : ISpecimen_Container [ ] ; /**
     * A mode or state of being that describes the nature of the specimen.
     */ condition ? : ICodeableConcept [ ] ; /**
     * To communicate any details or issues about the specimen or during the specimen collection. (for example: broken vial, sent with patient, frozen).
     */ note ? : IAnnotation [ ] ; } export const RTTI_Specimen = t . recursion ( 'ISpecimen' , ( ) => t . intersection ( [ t . type ( { resourceType : t . literal ( 'Specimen' ) } ) , t . partial ( { id : RTTI_id , meta : RTTI_Meta , implicitRules : RTTI_uri , _implicitRules : RTTI_Element , language : RTTI_code , _language : RTTI_Element , text : RTTI_Narrative , contained : t . array ( RTTI_ResourceList ) , extension : t . array ( RTTI_Extension ) , modifierExtension : t . array ( RTTI_Extension ) , identifier : t . array ( RTTI_Identifier ) , accessionIdentifier : RTTI_Identifier , status : createEnumType < SpecimenStatusKind > ( SpecimenStatusKind , 'SpecimenStatusKind' ) , _status : RTTI_Element , type : RTTI_CodeableConcept , subject : RTTI_Reference , receivedTime : RTTI_dateTime , _receivedTime : RTTI_Element , parent : t . array ( RTTI_Reference ) , request : t . array ( RTTI_Reference ) , collection : RTTI_Specimen_Collection , processing : t . array ( RTTI_Specimen_Processing ) , container : t . array ( RTTI_Specimen_Container ) , condition : t . array ( RTTI_CodeableConcept ) , note : t . array ( RTTI_Annotation ) } ) ] ) ) ;