聖公會蔡功譜中學學生會前身係五社聯會，啲參選學生必須係嚟自同一社別。跟尾個學生會成立喺1998年 ，取代咗個五社聯會，係由高中部學生自組內閣，而唔使同一社別組成嘅內閣，經由全校學生一人一票噉選舉出。每一年度嘅學生會主席，都可以由學校刻埋姓名到板上喺禮堂。領袖生方面，蔡功譜中學領袖生嘅職級分3種，總領袖生（3位）、副總領袖生（6位）同埋領袖生。由2010年開始，「領袖生組長」一職易名為「副總領袖生」。每一年度嘅總領袖生，個姓名都會刻埋喺禮堂份名錄度。至於四社，蔡功譜中學而家設立咗「仁」、「愛」、「忠」、「誠」四個學社。開始校創嗰陣原本係五社制度 ，即「紅」、「黃」、「藍」、「綠」、「棕」，跟尾校方改革社制決定由2011年9月開始實行四社制度。由2014年9月開始，四社改名成「仁」、「愛」、「忠」、「誠」，各社啲象徵動物都加埋，分別係羊、牛、鴿子、驢 。另外，學校其他啲校園組織仲包括有香港紅十字會青年團第179團 、香港童軍總會九龍地域何文田區九龍第30旅 、聖公會蔡功譜中學舊生會（2008年重組咗，但冇喺社團註冊處度註冊 ）。
The Student Union of S.K.H. Choi Kung Pu Secondary School was formerly known as the Five Social Councils, and some of the students who participated in the election had to be from the same society. The last student union was established in 1998 to replace the Five Social Councils, and was elected by the students of the high school to form their own cabinet, rather than a cabinet formed by one club, and was elected by one student per person, one vote. Each year, the president of the student council can also engrave his name from the school to the board in the auditorium. In terms of leadership students, there are 3 types of leadership students in Cai Gong Pu Middle School, including Chief Leader (3), Deputy Chief Leader (6) and Leader Students. Since 2010, the position of "Leader Student Leader" has been renamed as "Deputy Chief Leader Student". The names of the leaders of each year are engraved in the hall directory. As for the four societies, Cai Gong Pu Middle School has now set up four societies: "Benevolence", "Love", "Loyalty" and "Sincerity". At the beginning of the school's establishment, it was originally a five-club system, namely "red", "yellow", "blue", "green", and "brown", and finally the school reformed the social system and decided to implement the four-club system from September 2011. Since September 2014, the names of the four societies have been "benevolence", "love", "loyalty", and "sincerity", and the symbolic animals of each society have also been added, namely sheep, cows, pigeons, and donkeys. In addition, some other campus organizations include the 179th Regiment of the Hong Kong Red Cross Youth Corps, the 30th Brigade of Kowloon District, Ho Man Tin District, Kowloon District, Hong Kong Scout Association, and the Old Students' Association of Sheng Kung Hui Choi Kung Pu Secondary School (reorganized in 2008 but not registered with the Society Registry).