The Mets lead the all - time series 165 - 153 , much closer than it should be considering the difference in markets that the teams play in .
The Marlins have fielded minor league rosters in a number of those years .
The Mets lead the all - time series 165 - 153 , much closer than it should be considering the difference in markets that the teams play in , and the Marlins have fielded minor league rosters in a number of those years .