Let $X$ be a smooth variety and $M$ a fine moduli space of certain kind of sheaves on $X$. Let $\mathcal{E}$ be the universal family on $X\times M$. Suppose there is a derived functor $F$ from $D^b(X)$ to some derived category, say $D^b(Y)$, or $D^b(A-mod)$ for some finite algebra $A$, so that $F(\mathcal{E}\_t)$ is a semistable object of some kind (say semistable sheaves on $Y$ or semistable rep of $A$). This provides a map $f:M \to N$ where $N$ is the moduli of semistable objects on the target category. 


My question: is this map always algebraic or is there any criterion for this map to be algebraic?


Thank you very much for your help.



Derived functor giving algebraic map between moduli
If $F$ is a Fourier-Mukai functor, it can be applied not just fiberwise, but to the whole family. Namely, if $K \in D^b(X\times Y)$ is the Fourier-Mukai kernel, then by pullback it gives an object on
$$
X \times Y \times M = (X \times M) \times\_M (Y \times M) \subset (X \times M) \times (Y \times M).
$$
The corresponding Fourier-Mukai functor $D^b(X \times M) \to D^b(Y \times M)$ applied to $\mathcal{E}$, gives an object $\mathcal{F} \in D^b(Y\times M)$ with fibers $F(\mathcal{E}\_t)$, which are by assumption stable sheaves. THerefore, the object $\mathcal{F}$ gives an algebraic map $M \to N$.


