# bioconductor-spia¶

This package implements the Signaling Pathway Impact Analysis (SPIA) which uses the information form a list of differentially expressed genes and their log fold changes together with signaling pathways topology, in order to identify the pathways most relevant to the condition under the study.

## Installation¶

With an activated Bioconda channel (see 2. Set up channels), install with:

conda install bioconductor-spia


and update with:

conda update bioconductor-spia


A Docker container is available at https://quay.io/repository/biocontainers/bioconductor-spia.