17425881
Improving the discrepancy bound for sparse matrices: better approximations for sparse lattice approximation problems
A powerful technique to approximate certain sparse integer programs due to Beck & Fiala, shows that matrices A E {-l,O, 1),X, with no column having more than t nonzeroes, have discrepancy disc(A) less than 2t. An outstanding conjecture of Beck & Fiala is that this disc(A) here is O(d). This, if true, would be best-possible; any bound of o(t) would be very interesting. We make progress on this by showing that certain related discrepancy measures of A that are lower bounds on disc(A), are O(t3i4 log t) (i.e., o(t)). We also show that disc(A) = O(&logn), improving the Beck-Spencer bound of O(&log tlog n). These results also apply to the lattice approximation problem of Raghavan. We show improved upper bounds on the discrepancy of two well-studied families of sparse matrices: e permutations of [n], and rectangles containing n points in Rk. We show a discrepancy bound of O(&logn) for the former, improving on the previous-best O(Llogn) due to Bohus. This improves the bounds for the latter, for k = 2,3 and 4. We also present a simple connection between discrepancy and communication complexity.
23028632
Mechanism design for intellectual property rights protection
Estimates for the annual size of software piracy are in the region of $15 billion. The problem is also manifest in other forms of intellectual property. The explosive growth of the Internet and other communications networks has accentuated this problem. The new infrastructure has facilitated piracy by effectively reducing the cost of copying to negligible levels. (Recently, the FBI launched an operation called “Cyber Strike,” with the objective of curbing illegal copying and distribution of software over computer networks.) A naive suggestion has been that intellectual property rights (IPR) violation is actually beneficial from the social point of view, since it decreases the monopoly power of the provider. However, the flip side of this argument is that the IPR violations decrease the incentive for innovation because they lead to lower profits. In this paper, several mechanisms for IPR protection are designed. The mechanisms involve two tools: the level of enforcement (i.e., the probability that an IPR violator will be apprehended) and the penalty to be levied on an apprehended IPR violator. These tools are analyzed by considering the tradeoff between social welfare and the provider’s profit. The paper considers a provider who wants to maximize his profit and a policy maker who wants to maximize “net” social welfare (defined as welfare less any costs of enforcement), subject to a target profit for the provider. The consumers choose from among three options: buy, copy, or stay out of the market. A game-theoretic framework is adopted, where the policy maker, the provider, and the consumers get to move in that order. Among the results, the research shows that
39527744
Efficient Algorithms for the Minimum Weighted Dominating Clique Problem on Permutation Graphs
Given a graph G=(V, E) with real weights assigned to its vertices, a clique of G that also dominates its vertex set V, is called a dominating clique (DC) of G. Given a permutation graph G with all its vertices having nonnegative weights, and its permutation representation, the problem addressed in this paper is that of finding any minimum weight DC of G. We improve the existing O(|V|2) algorithm for this problem to O(|V|log|V|). The space complexity of our algorithm is O(|V|). We also present a |V| processor, O(log|V|) time, O(|V|log|V|) space parallel EREW PRAM algorithm for this problem.
12370019
New algorithmic aspects of the Local Lemma with applications to routing and partitioning
The Lovasz local lemma (LLL)is a powerful tool that is increasingly playing a valuable role in computer science. The original lemma was nonconstructive; a breakthrough of Beck and its generalizations (due to Alon and Molloy and Reed)have led to constructive versions. However, these methods do not capture some classes of applications of the LLL. We make progress on this by providing algorithmic approaches to two families of applications of the LLL. The first provides constructive versions of certain applications of an extension of the LLL (modeling, e.g., hypergraph-partitioning and low-congestion routing problems); the second provides new algorithmic results on constructing disjoint paths in graphs. Our results can also be seen as constructive upper bounds on the integrality gap of certain packing problems. One common theme of our work is a "gradual rounding" approach.
8868988
Contention resolution with constant expected delay
We study contention resolution in a multiple-access channel such as the Ethernet channel. In the model that we consider, n users generate messages for the channel according to a probability distribution. Raghavan and Upfal have given a protocol in which the expected delay (time to get serviced) of every message is O(log n) when messages are generated according to a Bernoulli distribution with generation rate up to about 1/10. Our main results are the following protocols: (a) one in which the expected average message delay is O(1) when messages are generated according to a Bernoulli distribution with a generation rate smaller than 1/e, and (b) one in which the expected delay of any message is O(1) for an analogous model in which users are synchronized (i.e., they agree about the time), there are potentially an infinite number of users, and messages are generated according to a Poisson distribution with generation rate up to 1/e. (Each message constitutes a new user.)
To achieve (a), we first show how to simulate (b) using n synchronized users, and then show how to build the synchronization into the protocol.
8959226
Low-Discrepancy Sets For High-Dimensional Rectangles: A Survey
A sub-area of discrepancy theory that has received much attention in computer science recently, is that of explicit constructions of low-discrepancy point sets for various types of rectangle families in high dimension. This research has led to interesting applications in error-control coding, distributed protocols, Web document filtering, derandomization, and other areas. We give a short survey of this area here.
16314241
End-to-end packet-scheduling in wireless ad-hoc networks
Packet-scheduling is a particular challenge in wireless networks due to interference from nearby transmissions. A distance-2 interference model serves as a useful abstraction here, and we study packet routing and scheduling under this model. The main focus of our work is the development of fully-distributed (decentralized) protocols. We present polylogarithmic/constant factor approximation algorithms for various families of disk graphs (which capture the geometric nature of wireless-signal propagation), as well as near-optimal approximation algorithms for general graphs. The packet-scheduling work by L eighton, Maggs and Rao (Combinatorica, 1994) and a basic distributed coloring procedure, originally due to Luby (J. Computer and System Sciences, 1993), underlie many of our algorithms. Experimental work of Finocchi, Panconesi, and Silvestri (SODA 2002) showed that a natural modification of Luby's algorithm leads to improved performance, and a rigorous explanation of this was left as an open question; we prove that the modified algorithm is provably better in the worst-case. Finally, using simulations, we study the impact of the routing strategy and the choice of parameters on the performance of our distributed algorithm for unit disk graphs.
16380223
Learning Chomsky-like Grammars for Biological Sequence Families
This paper presents a new method of measuring performance when positives are rare and investigates whether Chomsky-like grammar representations are useful for learning accurate comprehensible predictors of members of biological sequence families. The positive-only learning framework of the Inductive Logic Programming (ILP) system CProgol is used to generate a grammar for recognising a class of proteins known as human neuropeptide precursors (NPPs). As far as these authors are aware, this is both the first biological grammar learnt using ILP and the first real-world scientific application of the positive-only learning framework of CProgol. Performance is measured using both predictive accuracy and a new cost function, em Relative Advantage (RA). The RA results show that searching for NPPs by using our best NPP predictor as a filter is more than 100 times more efficient than randomly selecting proteins for synthesis and testing them for biological activity. The highest RA was achieved by a model which includes grammar-derived features. This RA is significantly higher than the best RA achieved without the use of the grammar-derived features.
2211677
Lattice-Search Runtime Distributions May Be Heavy-Tailed
Recent empirical studies show that runtime distributions of backtrack procedures for solving hard combinatorial problems often have intriguing properties. Unlike standard distributions (such as the normal), such distributions decay slower than exponentially and have "heavy tails". Procedures characterized by heavy-tailed runtime distributions exhibit large variability in efficiency, but a very straightforward method called rapid randomized restarts has been designed to essentially improve their average performance. We show on two experimental domains that heavy-tailed phenomena can be observed in ILP, namely in the search for a clause in the subsumption lattice. We also reformulate the technique of randomized rapid restarts to make it applicable in ILP and show that it can reduce the average search-time.
83148
Latency tolerance through parallelization of time in scientific applications
Summary form only given. Distributed computing environments, such as the grid, promise enormous raw computational power, but involve high communication overheads. It is therefore considered that they are ideally suited for "embarrassingly parallel" applications, such as Monte Carlo, and for certain applications where the loosely-coupled nature of the science involved in the simulations leads to a coarse grained computation. In a typical application, this is not feasible. We discuss our solution strategy, based on scalable functional decomposition, which can be used to keep the computation coarse grained, even on a large number of processors. Such decomposition can be attempted through a variety of means. We discuss the use of time parallelization to achieve this. We demonstrate results with a model problem, and then discuss its implementation for an important problem in nanomaterials simulation. We also show that this technique can be extended to make it inherently fault-tolerant.
9220714
Extracting Context-Sensitive Models in Inductive Logic Programming
Given domain-specific background knowledge and data in the form of examples, an Inductive Logic Programming (ILP) system extracts models in the data-analytic sense. We view the model-selection step facing an ILP system as a decision problem, the solution of which requires knowledge of the context in which the model is to be deployed. In this paper, "context" will be defined by the current specification of the prior class distribution and the client's preferences concerning errors of classification. Within this restricted setting, we consider the use of an ILP system in situations where: (a) contexts can change regularly. This can arise for example, from changes to class distributions or misclassification costs; and (b) the data are from observational studies. That is, they may not have been collected with any particular context in mind. Some repercussions of these are: (a) any one model may not be the optimal choice forall contexts; and (b) not all the background information provided may be relevant for all contexts. Using results from the analysis of Receiver Operating Characteristic curves, we investigate a technique that can equip an ILP system to reject those models that cannot possibly be optimal in any context. We present empirical results from using the technique to analyse two datasets concerned with the toxicity of chemicals (in particular, their mutagenic and carcinogenic properties). Clients can, and typically do, approach such datasets with quite different requirements. For example, a synthetic chemist would require models with a low rate of commission errors which could be used to direct efficiently the synthesis of new compounds. A toxicologist on the other hand, would prefer models with a low rate of omission errors. This would enable a more complete identification of toxic chemicals at a calculated cost of misidentification of non-toxic cases as toxic. The approach adopted here attempts to obtain a solution that contains models that are optimal for each such user according to the cost function that he or she wishes to apply. In doing so, it also provides one solution to the problem of how the relevance of background predicates is to be assessed in ILP.