17819380
Feature Selection for Complex Patterns
Feature selection is an important data preprocessing step in data mining and pattern recognition. Many algorithms have been proposed in the past for simple patterns that can be characterised by a single feature vector. Unfortunately, these algorithms are hardly applicable to what are referred as complex patterns that have to be described by a finite set of feature vectors. This paper addresses the problem of feature selection for the complex patterns. First, we formulated the calculation of mutual information for complex patterns based on Gaussian mixture model. A hybrid feature selection algorithm is then proposed based on the formulated mutual information calculation (filter) and Baysian classification (wrapper). Experimental results on XM2VTS speaker recognition database have not only verified the performance of the proposed algorithm, but also demonstrated that traditional feature selection algorithms designed for simple patterns would perform poorly for complex patterns.
6293846
Cryptographic Key Generation from Biometric Data Using Lattice Mapping
Crypto-biometric systems are recently emerging as an effective process of key management to address the security weakness of conventional key release systems using pass-codes, tokens or pattern recognition based biometrics. This paper presents a lattice mapping based fuzzy commitment method for cryptographic key generation from biometric data. The proposed method not only outputs high entropy keys, but also conceals the original biometric data such that it is impossible to recover the biometric data even when the stored information in the system is open to an attacker. Simulated results have demonstrated that its authentication accuracy is comparable to the well-known k-nearest neighbour classification
12496830
A Fast Algorithm for Color Image Segmentation
Based on K-means and a two-layer pyramid structure, a fast algorithm is proposed for color image segmentation. The algorithm employs two strategies. Firstly, a two-layer structure of a color image is established. Then, an improved K-means with integer based lookup table implementation is applied to each layer. The clustering result on the upper layer (lower resolution) is used to guide the clustering in the lower layer (higher resolution). Experiments have shown that the proposed algorithm is significantly faster than the original K-means algorithm while producing comparable segmentation results
7583260
Simultaneous MAP estimation of inhomogeneity and segmentation of brain tissues from MR images
Intrascan and interscan intensity inhomogeneities have been identified as a common source of making many advanced segmentation techniques fail to produce satisfactory results in separating brains tissues from multi-spectral magnetic resonance (MR) images. A common solution is to correct the inhomogeneity before applying the segmentation techniques. This paper presents a method that is able to achieve simultaneous semi-supervised MAP (maximum a-posterior probability) estimation of the inhomogeneity field and segmentation of brain tissues, where the inhomogeneity is parameterized. Our method can incorporate any available incomplete training data and their contribution can be controlled in a flexible manner and therefore the segmentation of the brain tissues can be optimised. Experiments on both simulated and real MR images have demonstrated that the proposed method estimated the inhomogeneity field accurately and improved the segmentation.
14087384
Rapid development of Hindi named entity recognition using conditional random fields and feature induction
This paper describes our application of conditional random fields with feature induction to a Hindi named entity recognition task. With only five days development time and little knowledge of this language, we automatically discover relevant features by providing a large array of lexical tests and using feature induction to automatically construct the features that most increase conditional likelihood. In an effort to reduce overfitting, we use a combination of a Gaussian prior and early stopping based on the results of 10-fold cross validation.
36676803
A Hypergraph Separator Based Variable Ordering Heuristic for Solving Real World SAT
Problem structure has been used to guide the variable ordering heuristic in backtracking search since [1]. Recent experimental results show that guiding the variable ordering heuristic using tree decompositions can improve the performance of SAT and CSP solvers. Huang and Darwiche's [2] variable ordering heuristic uses a Dtree, a static binary tree decomposition, to compute the variable group ordering. Since the Dtree has to be constructed before search, the pre-established variable groupings never change during the execution of the solving. Boolean Constraint Propagation (BCP) is the look-ahead strategy for all of the cutting-edge SAT solvers. Because long implication chains exist in real world instances and a large number of variables on the implication chains can be instantiated after making a relatively small number of decisions, the internal structure of real world instances often changes dramatically in different parts of the search tree.
10437441
Tolerating some redundancy significantly speeds up clustering of large protein databases
MOTIVATION
Sequence clustering replaces groups of similar sequences in a database with single representatives. Clustering large protein databases like the NCBI Non-Redundant database (NR) using even the best currently available clustering algorithms is very time-consuming and only practical at relatively high sequence identity thresholds. Our previous program, CD-HI, clustered NR at 90% identity in approximately 1 h and at 75% identity in approximately 1 day on a 1 GHz Linux PC (Li et al., Bioinformatics, 17, 282, 2001); however even faster clustering speed is needed because the size of protein databases are rapidly growing and many applications desire a lower attainable thresholds.


RESULTS
For our previous algorithm (CD-HI), we have employed short-word filters to speed up the clustering. In this paper, we show that tolerating some redundancy makes for more efficient use of these short-word filters and increases the program's speed 100 times. Our new program implements this technique and clusters NR at 70% identity within 2 h, and at 50% identity in approximately 5 days. Although some redundancy is present after clustering, our new program's results only differ from our previous program's by less than 0.4%.
7393635
On a decomposition for infinite transition matrices
Heyman gives an interesting factorization of I-P, where P is the transition probability matrix for an ergodic Markov chain. We show that this factorization is valid if and only if the Markov chain is recurrent. Moreover, we provide a decomposition result which includes all ergodic, null recurrent as well as the transient Markov chains as special cases. Such a decomposition has been shown to be useful in the analysis of queues.
14663700
A scan BIST generation method using a markov source and partial bit-fixing
Recently, Markov sources were shown to be effective in designing pseudo-random test pattern generators with low area overhead for built-in self-test of scan designs. This paper presents a new test pattern generation scheme based on a Markov source and a partial bit-fixing technique. A new method is proposed for the computation of the state transition probabilities of the Markov source based on the statistics of a deterministic test set. This is enhanced by partial bit-fixing logic, which fixes a group of consecutive inputs to all-0 or all-1. Experimental results show that the proposed BIST scheme can achieve 100% fault coverage for large benchmark circuits with reduced hardware overhead and reduced pattern counts compared to the earlier method using Markov sources.