527997
Statistical en-route filtering of injected false data in sensor networks
In a large-scale sensor network individual sensors are subject to security compromises. A compromised node can inject into the network large quantities of bogus sensing reports which, if undetected, would be forwarded to the data collection point (i.e. the sink). Such attacks by compromised sensors can cause not only false alarms but also the depletion of the finite amount of energy in a battery powered network. We present a statistical en-route filtering (SEF) mechanism that can detect and drop such false reports. SEF requires that each sensing report be validated by multiple keyed message authentication codes (MACs), each generated by a node that detects the same event. As the report is forwarded, each node along the way verifies the correctness of the MACs probabilistically and drops those with invalid MACs at earliest points. The sink further filters out remaining false reports that escape the en-route filtering. SEF exploits the network scale to determine the truthfulness of each report through collective decision-making by multiple detecting nodes and collective false-report-detection by multiple forwarding nodes. Our analysis and simulations show that, with an overhead of 14 bytes per report, SEF is able to drop 80/spl sim/90% injected false reports by a compromised node within 10 forwarding hops, and reduce energy consumption by 50% or more in many cases.
16959990
A wireless fair service algorithm for packet cellular networks
Wireless Fair Service Algorithm For Packet Cellular Networks Sonwu Lu Thyagarajan Nandagopal Vaduvur Bharghavan Coordinated Science Laboratory University of Illinois email: {sIu, thyagu, bharghav}~timely. crhc .uiuc. edu b order to support diverse communication-intensive redtirne and non red-time data flows over a scarce, varying and shared wireless channel with location-dependent and bursty errors, we defie a service model that has the following charxteristi~ short-tern fairness among flows which perceive a clean channel, worst-case delay bounds for packets, short-term throughput bounds for flows with clean channels and Iong-tem throughput bounds for dl flows with bounded channel error, optimal schedulable region, and support for both delay sensitive and error sensitive data flows. We present a wireless fair service algorithm, and show that it achieves the requirements of the service model through both analysis and simulation. The key aspects of the dg~ rithm are the following (a) an enhanced fair queueing based service scheme that supports decoupling of delay and bandwidth, (b) graceful service compensation for lagging flows and graceful service degradation for leading flows, (c) support for red-time delay sensitive flows as well as non realtime error sensitive flows, and (d) implementation of the wireless fair service rdgorithm within the fiarnework of the simple and robust CSMA/CA wireless medium access pro tocol.
8338982
Self-coordinating localized fair queueing in wireless ad hoc networks
Distributed fair queueing in a multihop, wireless ad hoc network is challenging for several reasons. First, the wireless channel is shared among multiple contending nodes in a spatial locality. Location-dependent channel contention complicates the fairness notion. Second, the sender of a flow does not have explicit information regarding the contending flows originated from other nodes. Fair queueing over ad hoc networks is a distributed scheduling problem by nature. Finally, the wireless channel capacity is a scarce resource. Spatial channel reuse, i.e., simultaneous transmissions of flows that do not interfere with each other, should be encouraged whenever possible. In this paper, we reexamine the fairness notion in an ad hoc network using a graph-theoretic formulation and extract the fairness requirements that an ad hoc fair queueing algorithm should possess. To meet these requirements, we propose maximize-local-minimum fair queueing (MLM-FQ), a novel distributed packet scheduling algorithm where local schedulers self-coordinate their scheduling decisions and collectively achieve fair bandwidth sharing. We then propose enhanced MLM-FQ (EMLM-FQ) to further improve the spatial channel reuse and limit the impact of inaccurate scheduling information resulted from collisions. EMLM-FQ achieves statistical short-term throughput and delay bounds over the shared wireless channel. Analysis and extensive simulations confirm the effectiveness and efficiency of our self-coordinating localized design in providing global fair channel access in wireless ad hoc networks.
1919911
Robust rate adaptation for 802.11 wireless networks
Rate adaptation is a mechanism unspecified by the 802.11 standards, yet critical to the system performance by exploiting the multi-rate capability at the physical layer.I n this paper, we conduct a systematic and experimental study on rate adaptation over 802.11 wireless networks. Our main contributions are two-fold. First, we critique five design guidelines adopted by most existing algorithms. Our study reveals that these seemingly correct guidelines can be misleading in practice, thus incur significant performance penalty in certain scenarios. The fundamental challenge is that rate adaptation must accurately estimate the channel condition despite the presence of various dynamics caused by fading, mobility and hidden terminals. Second, we design and implement a new Robust Rate Adaptation Algorithm (RRAA)that addresses the above challenge. RRAA uses short-term loss ratio to opportunistically guide its rate change decisions, and an adaptive RTS filter to prevent collision losses from triggering rate decrease. Our extensive experiments have shown that RRAA outperforms three well-known rate adaptation solutions (ARF, AARF, and SampleRate) in all tested scenarios, with throughput improvement up to 143%.
16187298
DIRAC: a software-based wireless router system
Routers are expected to play an important role in the IP-based wireless data network. Although a substantial number of techniques have been proposed to improve wireless network performance under dynamic wireless channel conditions and host mobility, a system support framework is still missing. In this paper, we describe DIRAC, a software-based router system that is designed for wireless networks to facilitate the implementation and evaluation of various channel-adaptive and mobility-aware protocols. DIRAC adopts a distributed architecture that is composed of two parts: a Router Core (RC) shared by the wireless subnets, and a Router Agent (RA) at each access point/base station. RAs expose wireless link-layer information to the RC and enforce the control commands issued by the RC. This approach allows the router to make adaptive decisions based on link-layer information feedback. It also permits the router to enforce its policies (e.g., policing) more effectively through underlying link-layer mechanisms. As showcases, we implement under DIRAC the prototypes of three wireless network services: link-layer assisted fast handover, channel-adaptive scheduling, and link-layer enforced policing. Our implementation and experiments show that our distributed wireless router provides a flexible framework, which enables advanced network-layer wireless services that are adaptive to channel conditions and host mobility.
619246
The impact of multihop wireless channel on TCP performance
This paper studies TCP performance in a stationary multihop wireless network using IEEE 802.11 for channel access control. We first show that, given a specific network topology and flow patterns, there exists an optimal window size W* at which TCP achieves the highest throughput via maximum spatial reuse of the shared wireless channel. However, TCP grows its window size much larger than W* leading to throughput reduction. We then explain the TCP throughput decrease using our observations and analysis of the packet loss in an overloaded multihop wireless network. We find out that the network overload is typically first signified by packet drops due to wireless link-layer contention, rather than buffer overflow-induced losses observed in the wired Internet. As the offered load increases, the probability of packet drops due to link contention also increases, and eventually saturates. Unfortunately the link-layer drop probability is insufficient to keep the TCP window size around W'*. We model and analyze the link contention behavior, based on which we propose link RED that fine-tunes the link-layer packet dropping probability to stabilize the TCP window size around W*. We further devise adaptive pacing to better coordinate channel access along the packet forwarding path. Our simulations demonstrate 5 to 30 percent improvement of TCP throughput using the proposed two techniques.
8160041
On the consistency of XML DTDs
DTD has been widely used as the schema language for XML documents. A DTD describes the structure of a collection of similar XML documents. The consistency problem of XML DTDs concerns the question that given a DTD D, if there exists any finite XML document that conforms to D. This issue is important because one wants to know whether a DTD specification is meaningful. In this paper, we formalize the notion of the consistency of DTDs, identify a sufficient and necessary condition for a DTD to be consistent, and propose a linear algorithm, DTDCon, for the consistency checking problem.
30892527
On Design and Implementation of Adaptive Data Classification Scheme for DSM Systems
Distributed Shared Memory (DSM) environment is built by using specific softwares, to combine a number of computer hardware resources into one computing environment. Such environment not only provides an easy way to execute parallel applications, but also combines resources to speedup execution of these applications. DSM systems need to maintain data consistency in memory, what usually leads to communication overhead. Therefore, there exist a number of strategies that can be used to overcome this overhead and improve overall performance. Prefetching strategies have been proven to show great performance in DSM systems, since they can reduce data access communication latencies from remote nodes. However, these strategies also transfer unnecessary prefetching pages to remote nodes. In this research paper, we focus on the analysis of data access pattern during execution of parallel applications. We propose an Adaptive Data Classification scheme to improve prefetching strategy, with the goal to improve overall performance. Adaptive Data Classification scheme classifies data according to the access behavior of pages, so that home node uses past history access patterns of remote nodes to decide whether it needs to transfer related pages to remote nodes. From experimental results, our method can improve the performance of prefetching strategies in DSM systems.
7907707
Fast search in DNA sequence databases using punctuation and indexing
Exact pattern searching in DNA sequence databases has applications in identification of highly conserved regulatory sequences, the design of hybridization probes, and improving performance of approximate homology searching tools such as BLAST and BLAT. We propose a new pattern searching algorithm, Compressed-Punctuated-Boyer-Moore (cp-BM), to enhance exact pattern match searches of DNA sequences. cp-BM encodes two bits to represent each A, T, C, G character (4-character 8 bit (4C8B) compression), plus punctuator characters to indicate unambiguously the encoding frame of the compressed target sequence, thereby solving the misalignment problem in searching patterns with ordinary 4C8B compression. cp-BM searches DNA patterns at least 6 times faster than AGREP for pattern lengths ≥ 128 and between 2-fold and 5-fold faster than d-BM for all pattern lengths. cp-BM's performance is enhanced by punctuator indexing and multiple punctuators, especially for short sequences, yielding greater than 10-fold enhancements compared to d-BM and AGREP. In addition, cp-BM outperformed BLAT for sequences 64 or more bases in length, and was more than three-fold faster for 256 base sequences.
7682350
Incremental genetic K-means algorithm and its application in gene expression data analysis
BackgroundIn recent years, clustering algorithms have been effectively applied in molecular biology for gene expression data analysis. With the help of clustering algorithms such as K-means, hierarchical clustering, SOM, etc, genes are partitioned into groups based on the similarity between their expression profiles. In this way, functionally related genes are identified. As the amount of laboratory data in molecular biology grows exponentially each year due to advanced technologies such as Microarray, new efficient and effective methods for clustering must be developed to process this growing amount of biological data.ResultsIn this paper, we propose a new clustering algorithm, Incremental Genetic K-means Algorithm (IGKA). IGKA is an extension to our previously proposed clustering algorithm, the Fast Genetic K-means Algorithm (FGKA). IGKA outperforms FGKA when the mutation probability is small. The main idea of IGKA is to calculate the objective value Total Within-Cluster Variation (TWCV) and to cluster centroids incrementally whenever the mutation probability is small. IGKA inherits the salient feature of FGKA of always converging to the global optimum. C program is freely available at http://database.cs.wayne.edu/proj/FGKA/index.htm.ConclusionsOur experiments indicate that, while the IGKA algorithm has a convergence pattern similar to FGKA, it has a better time performance when the mutation probability decreases to some point. Finally, we used IGKA to cluster a yeast dataset and found that it increased the enrichment of genes of similar function within the cluster.
620324
Relational Nested Optional Join for Efficient Semantic Web Query Processing
Increasing amount of RDF data on the Web drives the need for its efficient and effective management. In this light, numerous researchers have proposed to use RDBMSs to store and query RDF annotations using the SQL and SPARQL query languages. The first few attempts at SPARQL-to-SQL translation revealed non-trivial challenges related to correctness and efficiency of such translation in the presence of nested optional graph patterns. In this paper, we propose to extend relational databases with a novel relational operator, nested optional join (NOJ), that is more efficient than left outer join in processing nested optional graph patterns. We design three efficient algorithms to implement the new operator in relational databases: (1) nested-loops NOJ algorithm, NL-NOJ, (2) sort-merge NOJ algorithm, SM-NOJ, and (3) simple hash NOJ algorithm, SH-NOJ. Based on a real life RDF dataset, we demonstrate the efficiency of our algorithms by comparing them with the corresponding left outer join implementations.