455961
The Approximability of the Exemplar Breakpoint Distance Problem
In this paper we present the first set of approximation and inapproximability results for the Exemplar Breakpoint Distance Problem. Our inapproximability results hold for the simplest case between only two genomes \({\cal G}\) and \({\cal H}\), each containing only one sequence of genes (possibly with repetitions).
28060413
The Architecture of Yarrow: A Real-Time Intelligent Meta-Search Engine
7399730
An Almost Linear Time 2.8334-Approximation Algorithm for the Disc Covering Problem
The disc covering problem asks to cover a set of points on the plane with a minimum number of fix-sized discs. We develop an O(n(logn)2(loglogn)2) deterministic time 2.8334-approximation algorithm for this problem. Previous approximation algorithms [7,3,6], when used to achieve the same approximation ratio for the disc covering problem, will have much higher time complexity than our algorithms.
140623
Optimal Algorithms for Finding User Access Sessions from Very Large Web Logs
Although efficient identification of user access sessions from very large web logs is an unavoidable data preparation task for the success of higher level web log mining, little attention has been paid to algorithmic study of this problem. In this paper we consider two types of user access sessions, interval sessions and gap sessions. We design two efficient algorithms for finding respectively those two types of sessions with the help of some proposed structures. We present theoretical analysis of the algorithms and prove that both algorithms have optimal time complexity and certain error-tolerant properties as well. We conduct empirical performance analysis of the algorithms with web logs ranging from 100 megabytes to 500 megabytes. The empirical analysis shows that the algorithms just take several seconds more than the baseline time, i.e., the time needed for reading the web log once sequentially from disk to RAM, testing whether each user access record is valid or not, and writing each valid user access record back to disk. The empirical analysis also shows that our algorithms are substantially faster than the sorting based session finding algorithms. Finally, optimal algorithms for finding user access sessions from distributed web logs are also presented.
5722664
A Visualization System using Data Mining Techniques for Identifying Information Sources
The Visual Analysis System (VAS) was developed to couple emerging successes in data mining with information visualization techniques in order to create a richly interactive environment for information retrieval from the World Wide Web. VAS's retrieval strategy operates by first using a conventional search engine to form a core set,of retrieved documents. This core set is expanded by crawling from links in these documents to form a much larger set. The link topology of the larger set is then examined using data mining techniques to identify pages likely to be both relevant to the query and reliable as sources of information. Information visualization techniques are used to display the filtered set in a form amenable to the use of perceptual processes to filter and guide further user directed search. (Contains 16 references.) (MES) Reproductions supplied by EDRS are the best that can be made from the original document. N tr) 00 7171A Visualization System using Data Mining Techniques for Identifying Information Sources Richard H. Fowler, Tarkan Karadayi, Zhixiang Chen, Xiannong Meng, Wendy A. Lawrence Fowler Department of Computer Science University of Texas Pan American United States {fowler, tkaradayi, chen, meng, wfowler @panam.edu} PERMISSION TO REPRODUCE AND DISSEMINATE THIS MATERIAL HAS BEEN GRANTED BY
44651708
Personalized Web Search with Clusters
205436831
A media agent for automatically building a personalized semantic index of Web media objects
A novel idea of media agent is briefly presented, which can automatically build a personalized semantic index of Web media objects for each particular user. Because the Web is a rich source of multimedia data and the text content on the Web pages is usually semantically related to those media objects on the same pages, the media agent can automatically collect the URLs and related text, and then build the index of the multimedia data, on behalf of the user whenever and wherever she accesses these multimedia data or their container Web pages. Moreover, the media agent can also use an off-line crawler to build the index for those multimedia objects that are relevant to the user's favorites but have not been accessed by the user yet. When the user wants to find these multimedia data once again, the semantic index facilitates text-based search for her.
38006851
Approximation Algorithms for Independent Sets in Map Graphs
This paper presents polynomial-time approximation algorithms for the problem of computing a maximum independent set in a given map graph G with or without weights on its vertices. If G is given together with a map, then a ratio of 1+δ can be achieved in O(n2) time for any given constant δ > 0, no matter whether each vertex of G is given a weight or not. In case G is given without a map, a ratio of 4 can be achieved in O(n7) time if no vertex is given a weight, while a ratio of O(log n) can be achieved in O(n7 log n) time otherwise. Behind the design of our algorithms are several fundamental results for map graphs; these results can be used to design good approximation algorithms for coloring and vertex cover in map graphs, and may find applications to other problems on map graphs as well.
7066307
Measuring Network-Aware Worm Spreading Ability
This work investigates three aspects: (a) a network vulnerability as the non-uniform vulnerable-host distribution, (b) threats, i.e., intelligent worms that exploit such a vulnerability, and (c) defense, i.e., challenges for fighting the threats. We first study five data sets and observe consistent clustered vulnerable-host distributions. We then present a new metric, referred to as the non-uniformity factor, which quantifies the unevenness of a vulnerable-host distribution. This metric is essentially the Renyi information entropy and better characterizes the non-uniformity of a distribution than the Shannon entropy. We then analytically and empirically measure the infection rate and the propagation speed of network-aware worms. We show that a representative network-aware worm can increase the spreading speed by exactly or nearly a non-uniformity factor when compared to a random-scanning worm at the early stage of worm propagation. This implies that when a worm exploits an uneven vulnerable-host distribution as a network-wide vulnerability, the Internet can be infected much more rapidly. Furthermore, we analyze the effectiveness of defense strategies on the spread of network-aware worms. Our results demonstrate that counteracting network-aware worms is a significant challenge for the strategies that include host-based defense and IPv6.
7983044
Algorithm-based checkpoint-free fault tolerance for parallel matrix computations on volatile resources
As the size of today's high performance computers increases from hundreds, to thousands, and even tens of thousands of processors, node failures in these computers are becoming frequent events. Although checkpoint/rollback-recovery is the typical technique to tolerate such failures, it often introduces a considerable overhead. Algorithm-based fault tolerance is a very cost-effective method to incorporate fault tolerance into matrix computations. However, previous algorithm-based fault tolerance methods for matrix computations are often derived using algorithms that are seldomly used in the practice of today's high performance matrix computations and have mostly focused on platforms where failed processors produce incorrect calculations. To fill this gap, this paper extends the existing algorithm-based fault tolerance to the volatile computing platform where the failed processor stops working and applies it to scalable high performance matrix computations with two dimensional block cyclic data distribution. We show the practicality of this technique by applying it to the ScaLAPACK/PBLAS matrix-matrix multiplication kernel. Experimental results demonstrate that the proposed approach is able to survive process failures with a very low performance overhead
32847785
Approximation Algorithms for Independent Sets in Map Graphs
This paper presents polynomial-time approximation algorithms for the problem of computing a maximum independent set in a given map graph G with or without weights on its vertices. If G is given together with a map, then a ratio of 1+? can be achieved by a quadratic-time algorithm for any given constant ??0, no matter whether each vertex of G is given a weight or not. In case G is given without a map, a ratio of 4 can be achieved by a low-degree polynomial-time algorithm if no vertex is given a weight, while a ratio of 5 can be achieved by a low-degree polynomial-time algorithm otherwise.