7140152
Energy Reduction by Workload Adaptation in a Multi-Process Environment
Reducing energy consumption is an important issue in modern computers. Dynamic power management (DPM) has been extensively studied in recent years. One approach for DPM is to adjust workloads, such as clustering or eliminating requests, as a way to trade-off energy consumption and quality of services. Previous studies focus on single processes. However, when multiple concurrently running processes are considered, workload adjustment must be determined based on the interleaving of the processes' requests. When multiple processes share the same hardware component, adjusting one process may not save energy. This paper presents an approach to assign energy responsibility to individual processes based on how they affect power management. The assignment is used to estimate potential energy reduction by adjusting the processes. We use the estimation to guide runtime adaptation of workload behavior. Experiments demonstrate that our approach can save more energy and improve energy efficiency
15594355
Replacing Failed Sensor Nodes by Mobile Robots
Sensor replacement is important for sensor networks to provide continuous sensing services. Existing approaches relocate redundant nodes to fill the holes created by failed sensors and require all or most sensor nodes to have mobility. However, mobility equipment is expensive while technology trends are scaling sensors to be smaller and cheaper. In this paper, we propose to use a small number of mobile robots to replace failed sensors in a large-scale static sensor network. We study algorithms for detecting and reporting sensor failures and coordinating the movement of robots that minimize the motion energy of mobile robots and the messaging overhead incurred to the sensor network. A manager receives failure reports and determines which robot to handle a failure. We study three algorithms: a centralized manager algorithm, a fixed distributed manager algorithm, and a dynamic distributed manager algorithm. Our simulations show that: (a) The centralized and the dynamic distributed algorithms have lower motion overhead than the fixed distributed algorithm. (b) The centralized algorithm is less scalable than the two distributed manager algorithms. (c) The two distributed algorithms have higher messaging cost than the centralized algorithm. Hence, the optimal choice of the coordination algorithm depends on the specific scenarios and objectives being optimized.
9215156
Energy management using buffer memory for streaming data
This work presents a new approach for energy management by inserting data buffers. The buffers are managed using the concept of inventory control by treating energy as cost and computation as production. The data stored in the buffers are considered as merchandise. Our method provides a mathematical framework to develop general strategies managing the energy consumption in computers. The approach can solve a wide range of problems. For example, it can calculate the needed buffer sizes to achieve optimal energy savings. It can derive the conditions when a standby state saves energy. The method also shows the effect of load balancing on energy conservation and can handle the variations of data rates. We use sensor networks as case studies and demonstrate more than 20% energy savings.
161273
Dynamic power management for streaming data
This paper presents a method that uses data buffers to smoothen request variations and to create long idleness for power management. This method considers the power consumed by the buffers and assigns an energy penalty for buffer underflow. Our approach provides analytic formulas for calculating the optimal buffer sizes and the amount of data to store in the buffers. We use video prefetching as a case study and obtain power savings of more than 74% for MPEG-1 and 34% for MPEG-2 videos.
2733921
Joint power management of memory and disk
The paper presents a scheme to combine memory and power management for achieving better energy reduction. Our method periodically adjusts the size of physical memory and the timeout value to shut down a hard disk for reducing the average power consumption. We use Pareto distributions to model the distributions of idle time. The parameters of the distributions are adjusted at run-time for calculating the corresponding timeout value of the disk power management. The memory size is changed based on the inclusion property to predict the number of disk accesses at different memory sizes. Experimental results show more than 50% energy savings compared to a 2-competitive fixed-timeout method.
14287933
Statistically optimal dynamic power management for streaming data
This paper presents a method that uses data buffers to create long periods of idleness to exploit power management. This method considers the power consumed by the buffers and assigns an energy penalty for buffer underflow. Our approach provides analytic formulas for calculating the optimal buffer sizes without subjective or heuristic decisions. We simulate four different hardware configurations with MPEG-1, MPEG-2, and MPEG-4 formats as a case study. Our results indicate that the optimal buffer size varies significantly for different data formats on different hardware. Simulation results indicate that 16 MB buffers are sufficient for MPEG-1, MPEG-2, and MPEG-4 video streams from a microdrive or a network card, but transfers from an IDE disk require buffer sizes ranging from 16 MB to 176 MB, depending on each video's statistical properties.
7735246
Identifying cycling genes by combining sequence homology and expression data
MOTIVATION
The expression of genes during the cell division process has now been studied in many different species. An important goal of these studies is to identify the set of cycling genes. To date, this was done independently for each of the species studied. Due to noise and other data analysis problems, accurately deriving a set of cycling genes from expression data is a hard problem. This is especially true for some of the multicellular organisms, including humans.


RESULTS
Here we present the first algorithm that combines microarray expression data from multiple species for identifying cycling genes. Our algorithm represents genes from multiple species as nodes in a graph. Edges between genes represent sequence similarity. Starting with the measured expression values for each species we use Belief Propagation to determine a posterior score for genes. This posterior is used to determine a new set of cycling genes for each species. We applied our algorithm to improve the identification of the set of cell cycle genes in budding yeast and humans. As we show, by incorporating sequence similarity information we were able to obtain a more accurate set of genes compared to methods that rely on expression data alone. Our method was especially successful for the human dataset indicating that it can use a high quality dataset from one species to overcome noise problems in another.


AVAILABILITY
C implementation is available from the supporting website: http://www.cs.cmu.edu/~lyongu/pub/cellcycle/.
3148116
Modeling of wave behavior of substrate noise coupling for mixed-signal IC design
A new full-wave method is introduced for substrate noise analysis and simulation. The method is based on solution of the wave equation for the magnetic potential and can be implemented using standard circuit simulators. We compare the new method with the standard quasi-static method for typical substrate profiles and investigate the limits of validity of the quasi-static method.
158009
Threshold optimization algorithm for weak signal in distributed-sensor fusion system
Distributed order statistics constant false alarm rate (OS-CFAR) detection techniques are important for nonstationary observation with varying weak narrowband random signals. However, it is very difficult to choose system parameters to obtain optimal threshold values at the fusion center because of the nonlinear property of distributed OS-CFAR detection system. This paper provides a novel solution based on an effective and flexible genetic algorithm. Using this approach, all system parameters are directly coded in decimal chromosomes and they can be optimized simultaneously. Furthermore, we also derive the more general model by implementing the K fusion rules. The simulation results show that applying the proposed approach one can achieve comparable performances with the reported methods and results.
18145477
Wyner-Ziv Video Coding Based on Set Partitioning in Hierarchical Tree
In this paper, we propose a Wyner-Ziv video coding scheme based on set-partitioning in hierarchical trees (SPIHT) which can utilizing not only the spatial and temporal correlations but also the high-order statistical correlations. Wyner-Ziv theory on source coding with side information is employed as the basic coding principle, which makes the independent encoding and joint decoding become possible. In the proposed scheme, wavelet transform is first used to de-correlate the spatial dependency of a Wyner-Ziv frame. Then the quantized transform coefficients are organized by using magnitude with a set partitioning sorting algorithm. The ordered bit planes are coded using the Wyner-Ziv coding based on turbo codes. At the decoder, side information generated by motion compensated interpolation is used to conditionally decode the Wyner-Ziv frame. Since the high order statistical correlation is used, the proposed algorithm owns advantages over the traditional pixel-domain and transform-domain Wyner-ziv video coding schemes.
1552056
Pama: a Fast String Matching Algorithm
String matching is a fundamental operation in computer science, and its performance has great impact on many applications including database query, text processing, DNA and protein sequence analysis. In this paper, we propose a fast string matching algorithm, PAMA (PAttern MAtching). The shift rule used by PAMA not only subsumes both the bad character rule and the good suffix rule employed by the well-known Boyer-Moore algorithm, but also employs an additional key observation to enable faster shifting during the string matching process. Theoretically, we prove that from the same alignment, the next shift of PAMA will be at least as much as that of the Boyer-Moore algorithm. Experimentally, we show that PAMA indeed significantly outperforms the original Boyer-Moore algorithm in almost all cases, and outperforms other Boyer-Moore variants such as Tuned-BM, Turbo-BM and Horspool for long patterns (length ≥ 128) or for small alphabets (size < 8).