42163647
Nearly optimal one-to-many parallel routing in star networks
Star networks were proposed recently as an attractive alternative to the well-known hypercube models for interconnection networks. Extensive research has been performed that shows that star networks are as versatile as hypercubes. This paper is an effort in the same direction. Based on the well-known paradigms, we study the one-to-many parallel routing problem on star networks and develop an improved routing algorithm that finds n-1 node-disjoint paths between one node and a set of other n-1 nodes in the n-star network. These parallel paths are proven of minimum length within a small additive constant, and our algorithm has an optimal time complexity. This result significantly improves the previous known algorithms for the problem. Moreover, the algorithm well illustrates an application of the orthogonal partition of star networks, which was observed by the original inventors of the star networks but seems generally overlooked in the subsequent study. We should also point out that similar problems are already studied for hypercubes and have proven useful in designing efficient and fault tolerant routing algorithms on hypercube networks.
1021255
A minimal and complete set of operators for the development of robust manifold mesh modelers
In this paper, we identify a minimal and complete set of fundamental operators, which is necessary and sufficient for performing all homeomorphic and topological operations on 2- manifold mesh structures. Efficient algorithms are developed for the implementation of these operators. We also developed a set of powerful, user-friendly, and effective operators at the level of user-interface. Using these operators, we have developed a prototype system for robust, interactive, and user-friendly modeling of orientable 2-manifold meshes. Users of our system can perform a large set of homeomorphic and topological changes with these user-interface level operators. Our system is topologically robust in the sense that users will never create invalid 2-manifold mesh structure with these operators. In our system, the homeomorphic and topological surgery operations can be applied alternatively on 2-manifold meshes. With our system, users can blend surfaces, construct rinds, and open holes on these rind shapes. With our system, the shapes that look like solid, non-manifold, or 2-manifold with boundary can be manipulated. The system also provides automatic texture mapping during topology changes.
2261180
Graph Ear Decompositions and Graph Embeddings
Ear decomposition of a graph has been extensively studied in relation to graph connectivity. In this paper, a connection of ear decomposition to graph embeddings is exhibited. It is shown that constructing a maximum-paired ear decomposition of a graph and constructing a maximum-genus embedding of the graph are polynomial-time equivalent. Applications of this connection are discussed.
16331940
Optimal Parallel Routing in Star Networks
Star networks have recently been proposed as attractive alternatives to the popular hypercube for interconnecting processors on a parallel computer. In this paper, we present an efficient algorithm that constructs an optimal parallel routing in star networks. Our result improves previous results for the problem.
3146463
On Strong Menger-Connectivity of Star Graphs
Motivated by parallel routing in networks with faults, we study the following graph theoretical problem. Let G be a d-regular graph. We say that G is strongly Menger-connected if for any copy Gf of G with at most d - 2 nodes removed, every pair of nodes u and v in Gf are connected by min{deg f(u), deg f(v)} node-disjoint paths in Gf, where deg f(u) and deg f(v) are the degrees of the nodes u and v in Gf, respectively. We show that the star graphs, which are a recently proposed attractive alternative to the widely used hypercubes as network models, are strongly Menger-connected. An algorithm of optimal running time is developed that constructs the maximum number of node-disjoint paths of nearly optimal length in star graphs with faults.
5242879
Interactive rind modeling
In this paper, we describe a technique, with roots in topological graph theory, that we call rind modeling. It provides for the easy creation of surfaces resembling peeled and punctured rinds. We show how the method's two main steps of: 1) creation of a shell or crust like the rind of an orange, and 2) opening holes in the crust by punching or peeling can be encapsulated into a real time semi-automatic interactive algorithm. We include a number of worked examples, some by students in a first modeling course, that demonstrate the ease with which a large variety of intricate rind shapes can be created.
28550627
An even wiring approach to the ball grid array package routing
An even-wiring router for the BGA package is presented to interconnect each I/O pad of a chip to a corresponding ball distributed on the substrate area. The major phases for the router consist of layer assignment, topological routing, and physical routing. Using this router, we can generate an even distribution of planar and any-angle wires to improve manufacturing yield. We have also conducted various testing examples to verify the efficiency of this router. Experiments show that the router produces very good results, far better than the manual design, thus it can be practically applied to VLSI packaging.
6192242
Computing Maximum-Scoring Segments in Almost Linear Time
Given a sequence, the problem studied in this paper is to find a set of k disjoint continuous subsequences such that the total sum of all elements in the set is maximized. This problem arises naturally in the analysis of DNA sequences. The previous best known algorithm requires Θ(n log n) time in the worst case. For a given sequence of length n, we present an almost linear-time algorithm for this problem. Our algorithm uses a disjoint-set data structure and requires O(nα(n, n)) time in the worst case, where α(n, n) is the inverse Ackermann function.
30548729
A Class of Stratified Programs in Autoepistemic Logic of Knowledge and Belief
Przymusinski proposed [11] AELB, the autoepistemic logic of knowledge and belief. The AELB logic is a very powerful and expressive formal system which isomorphically contains various major non-monotonic knowledge representation formalisms and major logic program semantics. Thus AELB can be used as a unifying framework for non-monotonic knowledge representation formalisms, which allows us to compare and better understand different formalizations of common-sense knowledge.
6316461
Partitioned optimization algorithms for multiple sequence alignment
Multiple sequence alignment is an important and difficult problem in molecular biology and bioinformatics. In this paper, we propose a partitioning approach that significantly improves the solution time and quality by utilizing the locality structure of the problem. The algorithm solves the multiple sequence alignment in three stages. First, an automated and suboptimal partitioning strategy is used to divide the set of sequences into several subsections. Then a multiple sequence alignment algorithm based on ant colony optimization is used to align the sequences of each subsection. Finally, the alignment of original sequences can be obtained by assembling the result of each subsection. The ant colony algorithm is highly optimized in order to avoid local optimal traps and converge to global optimal efficiently. Experimental results show that the algorithm can significantly reduce the running time and improve the solution quality on large-scale multiple sequence alignment benchmarks.
27409853
The Strong Semantics for Logic Programs
Recently, the well-founded semantics of a logic program P has been strengthened to the well-founded semantics-by-case (WF C ) and then again to the extended well-founded semantics (WF E ). An important concept used in both WF C and WF E is that of derived rules. We extend the notion of derived rules by adding a new type of derivation and define the strong semantics of P, which has the following important property, known as the GCWA-property: if an atom p = false in all minimal models of P, then p = false in the strong semantics of P. In general, the WF C -semantics and the WF E -semantics do not have the GCWA-property. If we first apply the WF E -semantics to P and then apply the strong semantics to a suitably simplified form of P based on its WF E -semantics, then the resulting semantics is stronger than the WF E -semantics and has the GCWA-property.