code: public static void prepare(IAtomContainer container, boolean ringQuery) {
          if (ringQuery) {
              SMARTSAtomInvariants.configureDaylightWithRingInfo(container);
          } else {
              SMARTSAtomInvariants.configureDaylightWithoutRingInfo(container);
          }
      }
docs: Do not use - temporary method until the SMARTS packages are cleaned up.
  
  Prepares a target molecule for matching with SMARTS.
  
  @param container the container to initialise
  @param ringQuery whether the smarts will check ring size queries