code: public Structure getStructureForDomain(ScopDomain domain, ScopDatabase scopDatabase) throws IOException,
  			StructureException {
  		return getStructureForDomain(domain, scopDatabase, false);
  	}
docs: Returns the representation of a {@link ScopDomain} as a BioJava {@link Structure} object.
  
  @param domain
  a SCOP domain
  @param scopDatabase
  A {@link ScopDatabase} to use
  @return a Structure object
  @throws IOException
  @throws StructureException