code: public static void showStructure(Structure structure)
  			throws ClassNotFoundException, NoSuchMethodException,
  			InvocationTargetException, IllegalAccessException, InstantiationException{
  
  		Class<?> structureAlignmentJmol = Class.forName(strucAligJmol);
  
  		Object strucAligJ = structureAlignmentJmol.newInstance();
  
  		Method setS = structureAlignmentJmol.getMethod("setStructure", new Class[] {Structure.class});
  
  		setS.invoke(strucAligJ,structure);
  	}
docs: Shows a structure in Jmol
  @since 3.0.5