code: def get_run_command(self, tx_output_dir, input_files):
          
          logger.debug("Input data: %s" % ', '.join(input_files))
          cmd = [
              self.EXECUTABLE,
              '-db', self._db_location,
              '-name', self._sample_name,
              '-o', tx_output_dir,
          ] + list(input_files)
          return "export PATH=%s:%s:\"$PATH\"; %s;" % (self._get_samtools0_path(), self._get_ericscript_path(), " ".join(cmd))
docs: Constructs a command to run EricScript via do.run function.
  
          :param tx_output_dir: A location where all EricScript output will be
          written during execution.
          :param input_files: an iterable with paths to 2 fastq files
          with input data.
          :return: list