code: def run_with_log(self, dry_run=False, stage_files=True, resubmit_failed=False):
          
          fullkey = JobDetails.make_fullkey(self.full_linkname)
          job_details = self.jobs[fullkey]
          odir = os.path.dirname(job_details.logfile)
          try:
              os.makedirs(odir)
          except OSError:
              pass
          ostream = open(job_details.logfile, 'w')
          self.run(ostream, dry_run, stage_files, resubmit_failed)
docs: Runs this link with output sent to a pre-defined logfile
  
          Parameters
          -----------
          dry_run : bool
              Print command but do not run it.
  
          stage_files : bool
              Copy files to and from scratch staging area.
  
          resubmit_failed : bool
              Flag for sub-classes to resubmit failed jobs.