code: def main(argString=None):
      
      # Getting and checking the options
      args = parseArgs(argString)
      checkArgs(args)
  
      logger.info("Options used:")
      for key, value in vars(args).iteritems():
          logger.info("  --{} {}".format(key.replace("_", "-"), value))
  
      # Run plink
      logger.info("Running Plink to check the plate bias")
      executePlateBiasAnalysis(args)
  
      # Extract significant SNPs
      logger.info("Extracting significant SNPs")
      assocResults = extractSignificantSNPs(args.out)
  
      # Remove significant SNPs using plink
      logger.info("Computing frequency of significant SNPs")
      maf = computeFrequencyOfSignificantSNPs(args)
  
      # Create the final summary file
      logger.info("Creating the summary file")
      createSummaryFile(assocResults, maf, args.out)
docs: The main function of this module.
  
      :param argString: the options.
  
      :type argString: list
  
      These are the steps:
  
      1. Runs a plate bias analysis using Plink
         (:py:func:`executePlateBiasAnalysis`).
      2. Extracts the list of significant markers after plate bias analysis
         (:py:func:`extractSignificantSNPs`).
      3. Computes the frequency of all significant markers after plate bias
         analysis (:py:func:`computeFrequencyOfSignificantSNPs`).