docs: def run(file_path,include_dirs=[],dlems=False,nogui=False):
      """
      Function for running from a script or shell.
      """
      import argparse
      args = argparse.Namespace()
      args.lems_file = file_path
      args.I = include_dirs
      args.dlems = dlems
      args.nogui = nogui
      main(args=args)