Webtag builds on the Tagenerator tool, it takes into account the interactions of the tag with the primers and is a web based service.
This web based service builds on the Tagenerator tool, but is very fast because all tags are pre-generated and stored in a database. It is also a significant improvement since Webtag takes into account the interactions of the tag with the primers to be used in the experiment. Having it as a web based service also means that the molecular biologist doesn't have to download and install software with all the dependencies on their own computer. 
