A ranar 18 ga watan Janairun 2016, an sanar da cewa Safari zai koma Malmö FF lokacin da kwantiraginsa da FC Basel ya ƙare a ƙarshen kakar 2015-16. Safari ya sanya hannu kan kwangila tare da Malmö wanda ya tsawaita tsawon kakar 2020 kuma ya ba shi damar shiga ƙungiyar a tsakiyar kakar wasa ta 2020.
Shekarar 2016. Ya zira kwallaye a Allsvenskan a ranar 11 ga Afrilu 2017 a kan GIF Sundsvall kuma an nada shi mataimakin kyaftin bayan Markus Rosenberg. Ya lashe taken gasar na goma bayan ya lashe Allsvenskan na 2017, yana mai da Zlatan Ibrahimović dan Sweden ne kawai da ya fi samun taken gasar. Safari ya zama mai farawa na yau da kullun ga MFF yayin da suka cancanci zuwa gasar 2018-19 UEFA Europa League a ranar 30 ga Agusta 2018. A ranar 28 ga Satumba, 2020, Safari ya ba da sanarwar cewa zai yi ritaya daga ƙwallon ƙafa bayan kakar 2020. A ranar 8 ga Nuwamba, 2020, Safari da Malmö sun lashe Allsvenskan na 2020. Safari ya buga wasan sa na karshe a ranar 6 ga Disamba 2020 a wasan da suka ci Östersund da 4 a kan 0, ya ɗaga Lennart Johansson Trophy daga baya kuma ya sami girmamawa daga masu son Walter Samuel da Roger Federer.