A shekarar 2004, akwai likitoci uku kawai da ke aiki a kudancin Sudan, tare da asibitoci uku masu dacewa, kuma a wasu yankuna akwai likita guda daya kawai ga kowane mutum 500,000. An ba da labarin cutar HIV / AIDS a Kudancin Sudan amma an yi imanin cewa yaduwar kusan 3.1%. Dangane da wani binciken na 2013, Kudancin Sudan "mai yiwuwa yana da mafi girman cutar zazzabin cizon sauro a Afirka ta Kudu". Kudancin Sudan na ɗaya daga cikin ƙananan ƙasashe inda cutar dracunculiasis ke faruwa. A lokacin Yarjejeniyar Zaman Lafiya ta Kudancin Sudan ta 2005, bukatun agaji na agaji a Kudancin Sudan sun ragu sosai.
Sudan ta Kudu