O-GlcNAcylation of a protein can alter its interactome. As O-GlcNAc is highly hydrophilic, its presence may disrupt hydrophobic protein-protein interactions. For example, O-GlcNAc disrupts Sp1 interaction with TAF110, and O-GlcNAc disrupts CREB interaction with TAF130 and CRTC.
Some studies have also identified instances where protein-protein interactions are induced by O-GlcNAc. Metabolic labeling with the diazirine-containing O-GlcNDAz has been applied to identify protein-protein interactions induced by O-GlcNAc. Using a bait glycopeptide based roughly on a consensus sequence for O-GlcNAc, α-enolase, EBP1, and 14-3-3 were identified as potential O-GlcNAc readers. X-ray crystallography showed that 14-3-3 recognized O-GlcNAc through an amphipathic groove that also binds phosphorylated ligands. Hsp70 has also been proposed to act as a lectin to recognize O-GlcNAc. It has been suggested that O-GlcNAc plays a role in the interaction of α-catenin and β-catenin.