#' Slope, aspect, curvature, and partial slopes
#'
#' `terrain()` calculates topographic indices, including slope, aspect, curvature, and partial slopes (slopes in the east-west or north-south directions).
#'
#' @param x A `GRaster` (typically representing elevation).
#' @param v Name of the topographic metric(s) to calculate. Valid values include one or more of:
#'
#' * `"slope"`: Slope. Units are given by argument `units`.
#' * `"aspect"`: Aspect. When argument `northIs0` is `TRUE` (default), then aspect is given in degrees from north going clockwise (0 = north, 90 = east, 180 = south, 270 = west).  Units are given by argument `units`.
#' * `"profileCurve"`: Profile curvature.
#' * `"tanCurve"`: Tangential curvature.
#' * `"dx"`: Slope in east-west direction.
#' * `"dy"`: Slope in north-south direction.
#' * `"dxx"`: Second partial derivative in east-west direction.
#' * `"dyy"`: Second partial derivative in north-south direction.
#' * `"dxy"`: Second partial derivative along east-west and north-south direction.
#' * `"*"`: All of the above.
#'
#' @param units Character: "Units" in which to calculate slope and aspect: either `"degrees"` for degrees (default), `"radians"`, or `"percent"`. Partial matching is used.
#'
#' @param undefinedAspect Numeric or `NA` (default): Value to assign to flat areas for which aspect cannot be calculated.
#'
#' @param northIs0 Logical: If `TRUE` (default), aspect will be reported in "north orientation," such that 0 is north, and degrees run clockwise (90 is east, 180 south, 270 west). If `FALSE`, then aspect will be reported in "east orientation," such that 0 is east, and degrees run counterclockwise (90 is north, 180 west, 270 south). The latter is the default in **GRASS**, but the former is the default in [terra::terrain()] function, so is used here as the default. **Note:** The [sun()] function requires aspect to be in east orientation.
#'
#' @returns A `GRaster` with one or more layers.
#' 
#' @seealso [terra::terrain()], [ruggedness()], [wetness()], [geomorphons()], module `r.slope.aspect` in **GRASS**
#'
#' @example man/examples/ex_terrain.r
#'
#' @aliases terrain
#' @rdname terrain
#' @exportMethod terrain
methods::setMethod(
	f = "terrain",
	signature = c(x = "GRaster"),
	definition = function(
		x,
		v = "slope",
		units = "degrees",
		undefinedAspect = NA,
		northIs0 = TRUE
	) {

	metrics <- c("slope", "aspect", "profileCurve", "tanCurve", "dx", "dy", "dxx", "dyy", "dxy")
	if (any(v == "*")) v <- metrics
	v <- sort(v)
	v <- omnibus::pmatchSafe(v, metrics, useFirst = TRUE)
	
	units <- omnibus::pmatchSafe(units, c("degrees", "percent", "radians"), n = 1L)
	if (units == "radians") {
		unitRadians <- TRUE
		units <- "degrees"
	} else {
		unitRadians <- FALSE
	}

	if (nlyr(x) > 1) {
		warning("The input raster has > 1 layer. Only the first will be used.")
		x <- x[[1L]]
	}

	.locationRestore(x)
	.region(x)
	
	args <- list(
		cmd = "r.slope.aspect",
		elevation = sources(x),
		nprocs = faster("cores"),
		memory = faster("memory"),
		flags = c(.quiet(), "overwrite", "e")
	)
	
	if ("slope" %in% v) {
		args$slope <- .makeSourceName("slope", "rast")
		units <- omnibus::pmatchSafe(units, c("degrees", "percent"))
		args$format <- units
	}

	if ("aspect" %in% v) {
		args$aspect <- .makeSourceName("aspect", "rast")
		units <- omnibus::pmatchSafe(units, c("degrees", "percent"))
		args$format <- units
		if (northIs0) args$flags <- c(args$flags, "n")
	}

	if ("profileCurve" %in% v) args$pcurvature = .makeSourceName("profileCurve", "rast")
	if ("tanCurve" %in% v) args$tcurvature = .makeSourceName("tanCurve", "rast")
	if ("dx" %in% v) args$dx = .makeSourceName("dx", "rast")
	if ("dy" %in% v) args$dy = .makeSourceName("dy", "rast")
	if ("dxx" %in% v) args$dxx = .makeSourceName("dxx", "rast")
	if ("dyy" %in% v) args$dyy = .makeSourceName("dyy", "rast")
	if ("dxy" %in% v) args$dxy = .makeSourceName("dxy", "rast")
	
	do.call(rgrass::execGRASS, args)
	
	if ("slope" %in% v) {

		# convert to radians
		if (unitRadians) {

			oldSlopeSrc <- args$slope
			slopeSrc <- .makeSourceName("terrain_r_mapcalc_slope", "raster")
			ex <- paste0(slopeSrc, " = ", pi, " * ", oldSlopeSrc, " / 180")
			rgrass::execGRASS("r.mapcalc", expression = ex, flags = c(.quiet(), "overwrite"))
			if (faster("clean")) on.exit(.rm(oldSlopeSrc, type = "raster", warn = FALSE), add = TRUE)
		
		} else {
			slopeSrc <- args$slope
		}

		out <- .makeGRaster(slopeSrc, "slope")
	}
	
	if ("aspect" %in% v) {

		# force undefined aspect to a new value (r.terrain assigns undefined aspect to -9999)
		oldAspectSrc1 <- args$aspect
		aspectSrc <- .makeSourceName("terrain_r_mapcalc_undefined", "raster")
		if (is.na(undefinedAspect)) {
			ex <- paste0(aspectSrc, " = if(", oldAspectSrc1, " < 0, null(), ", oldAspectSrc1, ")")
		} else {
			ex <- paste0(aspectSrc, " = if(", oldAspectSrc1, " < 0, ", undefinedAspect, ", ", oldAspectSrc1, ")")
		}
		rgrass::execGRASS("r.mapcalc", expression = ex, flags = c(.quiet(), "overwrite"))
		if (faster("clean")) on.exit(.rm(oldAspectSrc1, type = "raster", warn = FALSE), add = TRUE)
	
		# convert to radians
		if (unitRadians) {

			oldAspectSrc2 <- aspectSrc
			aspectSrc <- .makeSourceName("terrain_r_mapcalc_radians", "raster")
			ex <- paste0(aspectSrc, " = ", pi, " * ", oldAspectSrc2, " / 180")
			rgrass::execGRASS("r.mapcalc", expression = ex, flags = c(.quiet(), "overwrite"))
			if (faster("clean")) on.exit(.rm(oldAspectSrc2, type = "raster", warn = FALSE), add = TRUE)
		
		}

		this <- .makeGRaster(aspectSrc, "aspect")
		if (exists("out", inherits = FALSE)) {
			out <- c(out, this)
		} else {
			out <- this
		}
	}

	if ("profileCurve" %in% v) {
		this <- .makeGRaster(args$pcurvature, "profileCurve")
		if (exists("out", inherits = FALSE)) {
			out <- c(out, this)
		} else {
			out <- this
		}
	}

	if ("tanCurve" %in% v) {
		this <- .makeGRaster(args$tcurvature, "tanCurve")
		if (exists("out", inherits = FALSE)) {
			out <- c(out, this)
		} else {
			out <- this
		}
	}

	if ("dx" %in% v) {
		this <- .makeGRaster(args$dx, "dx")
		if (exists("out", inherits = FALSE)) {
			out <- c(out, this)
		} else {
			out <- this
		}
	}

	if ("dy" %in% v) {
		this <- .makeGRaster(args$dy, "dy")
		if (exists("out", inherits = FALSE)) {
			out <- c(out, this)
		} else {
			out <- this
		}
	}

	if ("dxx" %in% v) {
		this <- .makeGRaster(args$dxx, "dxx")
		if (exists("out", inherits = FALSE)) {
			out <- c(out, this)
		} else {
			out <- this
		}
	}

	if ("dyy" %in% v) {
		this <- .makeGRaster(args$dyy, "dyy")
		if (exists("out", inherits = FALSE)) {
			out <- c(out, this)
		} else {
			out <- this
		}
	}

	if ("dxy" %in% v) {
		this <- .makeGRaster(args$dxy, "dxy")
		if (exists("out", inherits = FALSE)) {
			out <- c(out, this)
		} else {
			out <- this
		}
	}
	
	out

	} # EOF
)
