% Generated by roxygen2: do not edit by hand
% Please edit documentation in R/debarcode_cytof.R
\name{debarcode_data}
\alias{debarcode_data}
\title{Debarcodes data by doing normalization after preliminary barcode assignemnts}
\usage{
debarcode_data(m, bc.key, downsample.to = NULL)
}
\arguments{
\item{m}{The data matrix}

\item{bc.key}{The barcode key, as returned by \code{read_barcode_key}}
}
\value{
Returns a list with the following components
 \itemize{
     \item{\code{m.normed}}{ matrix with \code{nrow(m)} rows. The normalized barcode intensities}
     \item{\code{labels}}{ character vector of length \code{nrow(m)}. The sample assignments}
     \item{\code{deltas}}{ numeric vector of length \code{nrow(m)}. For each event, the separation between the lowest
         barcode channel and the highest non-barcode channel}
     \item{\code{bc.channels}}{ character vector. The name of the barcode channels}
 }
}
\description{
Debarcodes data by doing normalization after preliminary barcode assignemnts
}
