---
pipeline:
  name: tempSurfacewater_pre_stats_qm
transform:
  image_pull_secrets:
  - battelleecology-quay-read-all-pull-secret
  image: quay.io/battelleecology/neon-is-dir-filt:c0ce8112
  cmd:
  - /bin/bash
  stdin:
  - '#!/bin/bash'
  - python3 -m directory_filter.directory_filter_main
  env:
    OUT_PATH: /pfs/out
    FILTER_DIR: data,uncertainty_data,uncertainty_coef,flags
    FILTER_DIR_INDEX: '9'
    LOG_LEVEL: INFO
    RELATIVE_PATH_INDEX: '3'
input:
  pfs:
    name: IN_PATH
    repo: tempSurfacewater_group_path
    glob: /*/*/*
parallelism_spec:
  constant: 5
autoscaling: true
resource_requests:
  memory: 500M
  cpu: 0.5
resource_limits:
  memory: 1.5G
  cpu: 1.2
sidecar_resource_requests:
  memory: 4G
  cpu: 1.5
datum_set_spec:
  number: 1
scheduling_spec:
  node_selector:
    cloud.google.com/gke-ephemeral-storage-local-ssd: "true"
    nodepool.neonscience.org/pipeline: "yes"
    cloud.google.com/gke-spot: "true"
pod_spec: |-
  { "tolerations": [
    {
      "key": "nodepool.neonscience.org/pipeline",
      "operator": "Exists"
    },
    {
      "effect": "NoSchedule",
      "key": "cloud.google.com/gke-spot",
      "operator": "Exists"
    }  
  ] }
