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compatibility with older versions of oce, but will be removed soon.
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"defunct" in the next, and removed in the next after that. This goal is to provide a
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compatibility with older versions of oce, but will be removed soon.
The oce scheme for removing functions is similar to that used by
Bioconductor: items are marked as "deprecated" in one release, marked as
"defunct" in the next, and removed in the next after that. This goal is to provide a
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      <h1>Deprecated and Defunct Elements of the oce Package</h1>
      <small class="dont-index">Source: <a href="https://github.com/dankelley/oce/blob/HEAD/R/oce.R" class="external-link"><code>R/oce.R</code></a></small>
      <div class="d-none name"><code>oce-deprecated.Rd</code></div>
    </div>

    <div class="ref-description section level2">
    <p>Certain functions and function arguments are still provided for
compatibility with older versions of <a href="https://CRAN.R-project.org/package=oce" class="external-link"><span class="pkg">oce</span></a>, but will be removed soon.
The <a href="https://CRAN.R-project.org/package=oce" class="external-link"><span class="pkg">oce</span></a> scheme for removing functions is similar to that used by
<code>Bioconductor</code>: items are marked as "deprecated" in one release, marked as
"defunct" in the next, and removed in the next after that. This goal is to provide a
gentle migration path for users who keep their packages reasonably
up-to-date.</p>
    </div>


    <div class="section level2">
    <h2 id="details">Details<a class="anchor" aria-label="anchor" href="#details"></a></h2>
    <p>The following are marked "deprecated" in the present CRAN release of <a href="https://CRAN.R-project.org/package=oce" class="external-link"><span class="pkg">oce</span></a>.
Please use the replacement functions as listed below. The upcoming CRAN
release of <a href="https://CRAN.R-project.org/package=oce" class="external-link"><span class="pkg">oce</span></a> will mark these as "defunct", which is the
last step before outright removal.</p>
<table class="table table"><tr><td><strong>Deprecated</strong></td><td><strong>Replacement</strong></td><td><strong>Deprecated</strong></td><td><strong>Defunct</strong></td><td><strong>Removed</strong></td></tr></table><p>The following are marked "defunct", so calling them in the
the present version produces an error message that hints at a replacement
function. Once a function is marked "defunct" on one CRAN release, it will
be slated for outright deletion in some subsequent release.</p>
<table class="table table"><tr><td><strong>Defunct</strong></td><td><strong>Replacement</strong></td><td><strong>Version</strong></td></tr></table><p>The following functions were removed after having been marked as "deprecated"
in at least one CRAN release, and possibly as "defunct" in at least
one CRAN release.  (The version number in the table is the first
version to lack the named function.)</p>
<table class="table table"><tr><td><strong>Function</strong></td><td><strong>Replacement</strong></td><td><strong>Version</strong></td></tr><tr><td><code>addColumn()</code></td><td><code><a href="oceSetData.html">oceSetData()</a></code></td><td>1.1-2</td></tr><tr><td><code>ctdAddColumn()</code></td><td><code><a href="oceSetData.html">oceSetData()</a></code></td><td>1.1-2</td></tr><tr><td><code>ctdUpdateHeader()</code></td><td><code><a href="oceSetMetadata.html">oceSetMetadata()</a></code></td><td>1.1-2</td></tr><tr><td><code>findInOrdered()</code></td><td><code><a href="https://rdrr.io/r/base/findInterval.html" class="external-link">findInterval()</a></code></td><td>1.1-2</td></tr><tr><td><code>makeSection()</code></td><td><code><a href="as.section.html">as.section()</a></code></td><td>0.9.24</td></tr><tr><td><code>mapMeridians()</code></td><td><code><a href="mapGrid.html">mapGrid()</a></code></td><td>1.1-2</td></tr><tr><td><code>mapZones()</code></td><td><code><a href="mapGrid.html">mapGrid()</a></code></td><td>1.1-2</td></tr><tr><td><code>oce.as.POSIXlt()</code></td><td><code><a href="https://lubridate.tidyverse.org/reference/parse_date_time.html" class="external-link">lubridate::parse_date_time()</a></code></td><td>1.1-2</td></tr><tr><td><code>renameData()</code></td><td><code><a href="oceRenameData.html">oceRenameData()</a></code></td><td>1.7-9</td></tr><tr><td><code>trimString()</code></td><td><code><a href="https://rdrr.io/r/base/trimws.html" class="external-link">trimws()</a></code></td><td>1.8-2</td></tr></table><p>Several “oce” function arguments are considered "defunct", which
means they will be removed in the next CRAN release. They are as follows.</p><ul><li><p>The <code>fill</code> argument of <code><a href="mapPlot.html">mapPlot()</a></code> was confusing
to users, so it was designated as deprecated in June 2016.
(The confusion stemmed from subtle differences between
<code><a href="https://rdrr.io/r/graphics/plot.default.html" class="external-link">plot()</a></code> and <code><a href="https://rdrr.io/r/graphics/polygon.html" class="external-link">polygon()</a></code>, and the problem is that
<code><a href="mapPlot.html">mapPlot()</a></code> can use either of these functions, according
to whether coastlines are to be filled.)
The functionality is preserved, in the <code>col</code> argument.</p></li>
</ul></div>
    <div class="section level2">
    <h2 id="see-also">See also<a class="anchor" aria-label="anchor" href="#see-also"></a></h2>
    <div class="dont-index"><p>The “Bioconductor” scheme for removing functions is
described at
<code>https://www.bioconductor.org/developers/how-to/deprecation/</code> and it is
extended here to function arguments.</p></div>
    </div>

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