{ "id" : "Archaea",
  "name" : "Archaeal biomass reaction",
  "ref" : "derived from https://doi.org/10.1038/msb4100046", 
  "energy_GAM" :  30,
  "domain" : "Archaea",
  "met_groups" : [
    {
      "group_name" : "DNA",
      "mass" : 0.04,
      "unit_group" : "g",
      "unit_components" : "MOLFRACTION",
      "components" : [
        
        {
          "id"   : "cpd00115",
          "name" : "dATP",
          "comp" : "c",
          "coef" : 0.3031136,
          "link" : "cpd00012:-1"
        },
        
        {
          "id"   : "cpd00357",
          "name" : "dTTP",
          "comp" : "c",
          "coef" : 0.3031136,
          "link" : "cpd00012:-1"
        },
        
        {
          "id"   : "cpd00241",
          "name" : "dGTP",
          "comp" : "c",
          "coef" : 0.1968864,
          "link" : "cpd00012:-1"
        },
        
        {
          "id"   : "cpd00356",
          "name" : "dCTP",
          "comp" : "c",
          "coef" : 0.1968864,
          "link" : "cpd00012:-1"
        }
        
      ]
    },
    
    {
      "group_name" : "RNA",
      "mass" : 0.24,
      "unit_group" : "g",
      "unit_components" : "MOLFRACTION",
      "components" : [
        
        {
          "id"   : "cpd00002",
          "name" : "ATP",
          "comp" : "c",
          "coef" : 0.2661476,
          "link" : "cpd00012:-1"
        },
        
        {
          "id"   : "cpd00062",
          "name" : "UTP",
          "comp" : "c",
          "coef" : 0.2146770,
          "link" : "cpd00012:-1"
        },
        
        {
          "id"   : "cpd00038",
          "name" : "GTP",
          "comp" : "c",
          "coef" : 0.3203576,
          "link" : "cpd00012:-1"
        },
        
        {
          "id"   : "cpd00052",
          "name" : "CTP",
          "comp" : "c",
          "coef" : 0.1988178,
          "link" : "cpd00012:-1"
        }
        
      ]
    },
    
    {
      "group_name" : "Protein",
      "mass" : 0.63,
      "unit_group" : "g",
      "unit_components" : "MOLFRACTION",
      "components" : [
        
        {
          "id"   : "cpd00035",
          "name" : "L-alanine",
          "comp" : "c",
          "coef" : 0.06530653,
          "link" : "cpd00001:-1"
        },
        
        {
          "id"   : "cpd00051",
          "name" : "L-arginine",
          "comp" : "c",
          "coef" : 0.04720472,
          "link" : "cpd00001:-1"
        },
        
        {
          "id"   : "cpd00132",
          "name" : "L-asparagine",
          "comp" : "c",
          "coef" : 0.03620362,
          "link" : "cpd00001:-1"
        },
        
        {
          "id"   : "cpd00041",
          "name" : "L-Aspartate",
          "comp" : "c",
          "coef" : 0.03620362,
          "link" : "cpd00001:-1"
        },        
        
        {
          "id"   : "cpd00084",
          "name" : "L-Cysteine",
          "comp" : "c",
          "coef" : 0.01390139,
          "link" : "cpd00001:-1"
        },
        
        {
          "id"   : "cpd00053",
          "name" : "L-Glutamine",
          "comp" : "c",
          "coef" : 0.06370637,
          "link" : "cpd00001:-1"
        },        
        
        {
          "id"   : "cpd00023",
          "name" : "L-Glutamate",
          "comp" : "c",
          "coef" : 0.06370637,
          "link" : "cpd00001:-1"
        },        
        
        {
          "id"   : "cpd00033",
          "name" : "Glycine",
          "comp" : "c",
          "coef" : 0.09990999,
          "link" : "cpd00001:-1"
        },        
        
        {
          "id"   : "cpd00119",
          "name" : "L-Histidine",
          "comp" : "c",
          "coef" : 0.02000200,
          "link" : "cpd00001:-1"
        },
        
        {
          "id"   : "cpd00322",
          "name" : "L-Isoleucine",
          "comp" : "c",
          "coef" : 0.06600660,
          "link" : "cpd00001:-1"
        },        
        
        {
          "id"   : "cpd00107",
          "name" : "L-Leucine",
          "comp" : "c",
          "coef" : 0.08480848,
          "link" : "cpd00001:-1"
        },        
        
        {
          "id"   : "cpd00039",
          "name" : "L-Lysine",
          "comp" : "c",
          "coef" : 0.07900790,
          "link" : "cpd00001:-1"
        },
        
        {
          "id"   : "cpd00060",
          "name" : "L-Methionine",
          "comp" : "c",
          "coef" : 0.02770277,
          "link" : "cpd00001:-1"
        },        
        
        {
          "id"   : "cpd00066",
          "name" : "L-Phenylalanine",
          "comp" : "c",
          "coef" : 0.04300430,
          "link" : "cpd00001:-1"
        },          
        
        {
          "id"   : "cpd00129",
          "name" : "L-Proline",
          "comp" : "c",
          "coef" : 0.03930393,
          "link" : "cpd00001:-1"
        },  
        
        {
          "id"   : "cpd00054",
          "name" : "L-Serine",
          "comp" : "c",
          "coef" : 0.05290529,
          "link" : "cpd00001:-1"
        },          
        
        {
          "id"   : "cpd00161",
          "name" : "L-Threonine",
          "comp" : "c",
          "coef" : 0.04560456,
          "link" : "cpd00001:-1"
        },          
        
        {
          "id"   : "cpd00065",
          "name" : "L-Tryptophan",
          "comp" : "c",
          "coef" : 0.01330133,
          "link" : "cpd00001:-1"
        },          
        
        {
          "id"   : "cpd00069",
          "name" : "L-Tyrosine",
          "comp" : "c",
          "coef" : 0.02710271,
          "link" : "cpd00001:-1"
        },          
        
        {
          "id"   : "cpd00156",
          "name" : "L-Valine",
          "comp" : "c",
          "coef" : 0.07510751,
          "link" : "cpd00001:-1"
        }    
        
      ]
    },
    
    {
      "group_name" : "Cofactors",
      "mass" : 0.04,
      "unit_group" : "g",
      "unit_components" : "MOLFRACTION",
      "components" : [
        
        {
          "id"   : "cpd00003",
          "name" : "NAD",
          "comp" : "c",
          "coef" : 0.0235924933
        },
        
        {
          "id"   : "cpd00004",
          "name" : "NADH",
          "comp" : "c",
          "coef" : 0.0010723861
        },
        
        {
          "id"   : "cpd00005",
          "name" : "NADPH",
          "comp" : "c",
          "coef" : 0.0042895442
        },
        
        {
          "id"   : "cpd00006",
          "name" : "NADP",
          "comp" : "c",
          "coef" : 0.0010723861
        },

        {
          "id"   : "cpd00008",
          "name" : "ADP",
          "comp" : "c",
          "coef" : 0.0214477212
        },
        
        {
          "id"   : "cpd00002",
          "name" : "ATP",
          "comp" : "c",
          "coef" : 0.0428954424
        },
        
        {
          "id"   : "cpd00010",
          "name" : "Coenzyme A",
          "comp" : "c",
          "coef" : 0.0005361930
        },
        
        {
          "id"   : "cpd00018",
          "name" : "AMP",
          "comp" : "c",
          "coef" : 0.0107238606
        },
        
        {
          "id"   : "cpd00022",
          "name" : "Acetyl-CoA",
          "comp" : "c",
          "coef" : 0.0010723861
        },
        
        {
          "id"   : "cpd00078",
          "name" : "Succinyl-CoA",
          "comp" : "c",
          "coef" : 0.0005361930
        },
        
        {
          "id"   : "cpd00087",
          "name" : "5,6,7,8-Tetrahydrofolate",
          "comp" : "c",
          "coef" : 0.0010723861
        },
        
        {
          "id"   : "cpd00118",
          "name" : "Putrescine",
          "comp" : "c",
          "coef" : 0.2809651475
        },
        
        {
          "id"   : "cpd00649",
          "name" : "Coenzyme F420-2",
          "comp" : "c",
          "coef" : 0.0085790885
        },
        
        {
          "id"   : "cpd02246",
          "name" : "coenzyme m",
          "comp" : "c",
          "coef" : 0.2209115282
        },
        
        {
          "id"   : "cpd02817",
          "name" : "HTP",
          "comp" : "c",
          "coef" : 0.0053619303
        },
        
        {
          "id"   : "cpd03425",
          "name" : "Factor F430",
          "comp" : "c",
          "coef" : 0.0214477212
        },
        
        {
          "id"   : "cpd03802",
          "name" : "sym-Homospermidine",
          "comp" : "c",
          "coef" : 0.0504021448
        },
        
        {
          "id"   : "cpd15862",
          "name" : "coenzyme F390 (adenosine)",
          "comp" : "c",
          "coef" : 0.0002680965
        },
        
        {
          "id"   : "cpd15863",
          "name" : "coenzyme F390 (guanosine)",
          "comp" : "c",
          "coef" : 0.0002680965
        },
        
        {
          "id"   : "cpd15884",
          "name" : "tetrahydrosarcinapterin",
          "comp" : "c",
          "coef" : 0.2530831099
        },
        
        {
          "id"   : "cpd33626",
          "name" : "adenosyl factor III",
          "comp" : "c",
          "coef" : 0.0504021448
        }
        
      ]
    },
    
    {
      "group_name" : "Lipids",
      "mass" : 0.049,
      "unit_group" : "g",
      "unit_components" : "MOLFRACTION",
      "components" : [
        
        {
          "id"   : "cpd15817",
          "name" : "2-O-(3'-hydroxy)phytanyl-3-O-phytanyl-sn-glycero-l-phosphoethanolamine",
          "comp" : "c",
          "coef" : 0.04545455
        },
        
        {
          "id"   : "cpd15818",
          "name" : "2-O-(3'-hydroxy)phytanyl-3-O-phytanyl-sn-glycerol-1-phospho-3'-sn-glycerol",
          "comp" : "c",
          "coef" : 0.17003367
        },
        
        {
          "id"   : "cpd15819",
          "name" : "2-O-(3'-hydroxyl)phytanyl-3-O-phytanyl-sn-glycero-1-phospho-myo-inositol",
          "comp" : "c",
          "coef" : 0.22727273
        },
        
        {
          "id"   : "cpd15820",
          "name" : "2-O-(3'-hydroxy)phytanyl-3-O-phytanyl-sn-glycero-l-phosphoserine",
          "comp" : "c",
          "coef" : 0.19360269
        },
        
        {
          "id"   : "cpd15858",
          "name" : "2,3-O-phytanyl-sn-glycero-1-phosphoethanolamine",
          "comp" : "c",
          "coef" : 0.01178451
        },
        
        {
          "id"   : "cpd15859",
          "name" : "2,3-di-O-phytanyl-sn-glycerol-1-phospho-3'-sn-glycerol",
          "comp" : "c",
          "coef" : 0.01178451
        },
        
        {
          "id"   : "cpd15860",
          "name" : "2,3-O-phytanyl-sn-glycero-1-phospho-myo-inositol",
          "comp" : "c",
          "coef" : 0.04545455
        },
        
        {
          "id"   : "cpd15861",
          "name" : "2,3-O-phytanyl-sn-glycero-1-phosphoserine",
          "comp" : "c",
          "coef" : 0.02188552
        },
        
        {
          "id"   : "cpd15880",
          "name" : "glucosaminyl archaetidyl-myo-inositol",
          "comp" : "c",
          "coef" : 0.27272727
        }
        
      ]
    },
    
    {
      "group_name" : "Carbohydrates",
      "mass" : 0.001,
      "unit_group" : "g",
      "unit_components" : "MOLFRACTION",
      "components" : [
        
        {
          "id"   : "cpd00155",
          "name" : "glycogen",
          "comp" : "c",
          "coef" : 1
        }
      ]
    }
  ]
}