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    <h1>Summary statistics on entire database</h1>
    <small class="dont-index">Source: <a href="https://github.com/PascalCrepey/HospitalNetwork/blob/HEAD/R/DataSummary.R" class="external-link"><code>R/DataSummary.R</code></a></small>
    <div class="hidden name"><code>all_admissions_summary.Rd</code></div>
    </div>

    <div class="ref-description">
    <p>Function that extracts summary statistics from entire database</p>
    </div>

    <div id="ref-usage">
    <div class="sourceCode"><pre class="sourceCode r"><code><span><span class="fu">all_admissions_summary</span><span class="op">(</span><span class="va">base</span>, verbose <span class="op">=</span> <span class="cn">FALSE</span>, <span class="va">...</span><span class="op">)</span></span></code></pre></div>
    </div>

    <div id="arguments">
    <h2>Arguments</h2>
    <dl><dt>base</dt>
<dd><p>(data.table).
A subject discharge database, in the form of a data.table. The data.table should have at least the following columns:
    sID: subjectID (character)
    fID: facilityID (character)
    Adate: admission date (date)
    Ddate: discharge date (date)</p></dd>


<dt>verbose</dt>
<dd><p>(boolean) print diagnostic messages. Default is TRUE.</p></dd>


<dt>...</dt>
<dd><p>other parameters passed on to internal functions</p></dd>

</dl></div>
    <div id="value">
    <h2>Value</h2>
    

<p>a list of summary statistics:
        -   meanLOS: The mean length of stay, in days
        -   meanTBA: The mean time between admissions, in days
        -   totalAdmissions: Total number of admissions (i.e. number of records in the database)
        -   numSubjects: Number of unique subjects
        -   numFacilities: Number of unique facilities
        -   LOSdistribution: Distribution of length of stay
        -   TBAdistribution: Distribution of time between admissions</p>
    </div>

    <div id="ref-examples">
    <h2>Examples</h2>
    <div class="sourceCode"><pre class="sourceCode r"><code><span class="r-in"><span><span class="va">mydb</span> <span class="op">&lt;-</span> <span class="fu"><a href="create_fake_subjectDB.html">create_fake_subjectDB</a></span><span class="op">(</span>n_subjects <span class="op">=</span> <span class="fl">100</span>, n_facilities <span class="op">=</span> <span class="fl">10</span><span class="op">)</span></span></span>
<span class="r-in"><span><span class="va">myBase</span> <span class="op">&lt;-</span> <span class="fu"><a href="checkBase.html">checkBase</a></span><span class="op">(</span><span class="va">mydb</span><span class="op">)</span></span></span>
<span class="r-msg co"><span class="r-pr">#&gt;</span> Checking for missing values...</span>
<span class="r-msg co"><span class="r-pr">#&gt;</span> Checking for duplicated records...</span>
<span class="r-msg co"><span class="r-pr">#&gt;</span> Removed 0 duplicates</span>
<span class="r-msg co"><span class="r-pr">#&gt;</span> Done.</span>
<span class="r-in"><span><span class="fu">all_admissions_summary</span><span class="op">(</span><span class="va">myBase</span><span class="op">)</span></span></span>
<span class="r-out co"><span class="r-pr">#&gt;</span> $meanLOS</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> Time difference of 5.011952 days</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> $meanTBA</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> Time difference of 29.76821 days</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> $totalAdmissions</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> [1] 251</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> $numSubjects</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> [1] 100</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> $numFacilities</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> [1] 10</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> $LOSdistribution</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> LOS</span>
<span class="r-out co"><span class="r-pr">#&gt;</span>  1  2  3  4  5  6  7  8  9 10 11 13 14 </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 32 22 35 24 33 37 18 20 10  7 11  1  1 </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> $TBAdistribution</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> TBA</span>
<span class="r-out co"><span class="r-pr">#&gt;</span>  8  9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 </span>
<span class="r-out co"><span class="r-pr">#&gt;</span>  1  2  2  1  1  1  1  3  2  2  3  5  5 10  2  4  2  3 11  8  8  8  4  1  1  8 </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 53 54 56 57 </span>
<span class="r-out co"><span class="r-pr">#&gt;</span>  3  5  7  3  3  1  4  4  3  1  1  3  4  1  1  1  1  2  1  1  1  1 </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> </span>
</code></pre></div>
    </div>
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