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    <h1>Prepare the data for modelling</h1>
    <small class="dont-index">Source: <a href="https://github.com/Pakillo/BayesianNetworks/blob/HEAD/R/prepare_data.R" class="external-link"><code>R/prepare_data.R</code></a></small>
    <div class="hidden name"><code>prepare_data.Rd</code></div>
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    <div class="ref-description">
    <p>Prepare the data for modelling</p>
    </div>

    <div id="ref-usage">
    <div class="sourceCode"><pre class="sourceCode r"><code><span><span class="fu">prepare_data</span><span class="op">(</span>mat <span class="op">=</span> <span class="cn">NULL</span>, sampl.eff <span class="op">=</span> <span class="cn">NULL</span><span class="op">)</span></span></code></pre></div>
    </div>

    <div id="arguments">
    <h2>Arguments</h2>
    <dl><dt>mat</dt>
<dd><p>An integer matrix containing quantitative (not qualitative or binary)
count data con interaction frequency (e.g. visits to flowers, number of fruits
consumed per plant or species). Plants must be in rows, Animals must be in columns.</p></dd>


<dt>sampl.eff</dt>
<dd><p>A numeric vector with the sampling effort (e.g. observation hours)
spent on each plant.</p></dd>

</dl></div>
    <div id="value">
    <h2>Value</h2>
    

<p>A named list with all the data required to run the model.</p>
    </div>

    <div id="ref-examples">
    <h2>Examples</h2>
    <div class="sourceCode"><pre class="sourceCode r"><code><span class="r-in"><span><span class="fu"><a href="https://rdrr.io/r/utils/data.html" class="external-link">data</a></span><span class="op">(</span><span class="va">web</span><span class="op">)</span></span></span>
<span class="r-in"><span><span class="fu">prepare_data</span><span class="op">(</span><span class="va">web</span>, sampl.eff <span class="op">=</span> <span class="fu"><a href="https://rdrr.io/r/base/rep.html" class="external-link">rep</a></span><span class="op">(</span><span class="fl">20</span>, <span class="fu"><a href="https://rdrr.io/r/base/nrow.html" class="external-link">nrow</a></span><span class="op">(</span><span class="va">web</span><span class="op">)</span><span class="op">)</span><span class="op">)</span></span></span>
<span class="r-out co"><span class="r-pr">#&gt;</span> $M</span>
<span class="r-out co"><span class="r-pr">#&gt;</span>    A1 A2 A3 A4 A5 A6 A7 A8 A9 A10 A11 A12 A13 A14 A15 A16 A17 A18 A19 A20 A21</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> P1  0  0  3  1  0  0  0  0  0   0   0   0   0   4   0   0   0   0   0   0   0</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> P2  0  0 12  0  0  0  0  0  0   0   0   0   0   8   0   1   0   0   0   0   1</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> P3  0  0  0  0  1  0  7  0  0   0   0   0   0   2   0   0   5   3   0   0   0</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> P4  0  0  2  0  3  0  0  1  0   0   0   0   0  30   0   0   0   0   0   0   0</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> P5  0  0  0  0  0  0  0  0  0   0   0   0   0   1   0   0   0   0   1   0   0</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> P6  0  0  0  4  1  0  1  0  0   0   1   5   2   0   0   0   0   0   0   0   0</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> P7  3  0 33  0  0  2  6  0  2   0   0   0   0  27   0   0   0   0   0   0   2</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> P8  0  1  1  1  2  0 11  0  0   6   0   0   0   1   2   0   0   0   0   1   0</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> $n_p</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> [1] 8</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> $n_a</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> [1] 21</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> </span>
<span class="r-out co"><span class="r-pr">#&gt;</span> $C</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> [1] 20 20 20 20 20 20 20 20</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> </span>
</code></pre></div>
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