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      <img src="../logo.png" class="logo" alt=""><h1>Capture histories (9 samples) of Cutthroat Trout from Auke Lake.</h1>
      <small class="dont-index">Source: <a href="https://github.com/fishR-Core-Team/FSA/blob/HEAD/R/CutthroatAL.R" class="external-link"><code>R/CutthroatAL.R</code></a></small>
      <div class="d-none name"><code>CutthroatAL.Rd</code></div>
    </div>

    <div class="ref-description section level2">
    <p>Individual capture histories of Cutthroat Trout (<em>Oncorhynchus clarki</em>) in Auke Lake, Alaska, from samples taken in 1998-2006.</p>
    </div>


    <div class="section level2">
    <h2 id="format">Format<a class="anchor" aria-label="anchor" href="#format"></a></h2>
    <p>A data frame with 1684 observations on the following 10 variables.</p><dl><dt>id</dt>
<dd><p>Unique identification numbers for each fish</p></dd>

   <dt>y1998</dt>
<dd><p>Indicator variable for whether the fish was captured in 1998 (<code>1</code>=captured)</p></dd>

   <dt>y1999</dt>
<dd><p>Indicator variable for whether the fish was captured in 1999 (<code>1</code>=captured)</p></dd>

   <dt>y2000</dt>
<dd><p>Indicator variable for whether the fish was captured in 2000 (<code>1</code>=captured)</p></dd>

   <dt>y2001</dt>
<dd><p>Indicator variable for whether the fish was captured in 2001 (<code>1</code>=captured)</p></dd>

   <dt>y2002</dt>
<dd><p>Indicator variable for whether the fish was captured in 2002 (<code>1</code>=captured)</p></dd>

   <dt>y2003</dt>
<dd><p>Indicator variable for whether the fish was captured in 2003 (<code>1</code>=captured)</p></dd>

   <dt>y2004</dt>
<dd><p>Indicator variable for whether the fish was captured in 2004 (<code>1</code>=captured)</p></dd>

   <dt>y2005</dt>
<dd><p>Indicator variable for whether the fish was captured in 2005 (<code>1</code>=captured)</p></dd>

   <dt>y2006</dt>
<dd><p>Indicator variable for whether the fish was captured in 2006 (<code>1</code>=captured)</p></dd>

 
</dl></div>
    <div class="section level2">
    <h2 id="source">Source<a class="anchor" aria-label="anchor" href="#source"></a></h2>
    <p>From Appendix A.3 of Harding, R.D., C.L. Hoover, and R.P. Marshall. 2010. Abundance of Cutthroat Trout in Auke Lake, Southeast Alaska, in 2005 and 2006. Alaska Department of Fish and Game Fisheries Data Series No. 10-82. [Was (is?) from http://www.sf.adfg.state.ak.us/FedAidPDFs/FDS10-82.pdf.] <a href="https://raw.githubusercontent.com/fishR-Core-Team/FSA/master/data-raw/CutthroatAL.csv" class="external-link">CSV file</a></p>
    </div>
    <div class="section level2">
    <h2 id="note">Note<a class="anchor" aria-label="anchor" href="#note"></a></h2>
    <p>Entered into “RMark” format (see <code><a href="https://fishr-core-team.github.io/FSAdata/reference/CutthroatALf.html">CutthroatALf</a></code> in <span class="pkg">FSAdata</span>) and then converted to individual format with <code><a href="capHistConvert.html">capHistConvert</a></code></p>
    </div>
    <div class="section level2">
    <h2 id="topic-s-">Topic(s)<a class="anchor" aria-label="anchor" href="#topic-s-"></a></h2>
    

<p></p><ul><li><p>Population Size</p></li>
<li><p>Abundance</p></li>
<li><p>Mark-Recapture</p></li>
<li><p>Capture-Recapture</p></li>
<li><p>Jolly-Seber</p></li>
<li><p>Capture History</p></li>
</ul></div>
    <div class="section level2">
    <h2 id="see-also">See also<a class="anchor" aria-label="anchor" href="#see-also"></a></h2>
    <div class="dont-index"><p>Used in <code><a href="mrOpen.html">mrOpen</a></code> examples.</p></div>
    </div>

    <div class="section level2">
    <h2 id="ref-examples">Examples<a class="anchor" aria-label="anchor" href="#ref-examples"></a></h2>
    <div class="sourceCode"><pre class="sourceCode r"><code><span class="r-in"><span><span class="fu"><a href="https://rdrr.io/r/utils/str.html" class="external-link">str</a></span><span class="op">(</span><span class="va">CutthroatAL</span><span class="op">)</span></span></span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 'data.frame':	1684 obs. of  10 variables:</span>
<span class="r-out co"><span class="r-pr">#&gt;</span>  $ id   : int  1 2 3 4 5 6 7 8 9 10 ...</span>
<span class="r-out co"><span class="r-pr">#&gt;</span>  $ y1998: int  0 0 0 0 0 0 0 0 0 0 ...</span>
<span class="r-out co"><span class="r-pr">#&gt;</span>  $ y1999: int  0 0 0 0 0 0 0 0 0 0 ...</span>
<span class="r-out co"><span class="r-pr">#&gt;</span>  $ y2000: int  0 0 0 0 0 0 0 0 0 0 ...</span>
<span class="r-out co"><span class="r-pr">#&gt;</span>  $ y2001: int  0 0 0 0 0 0 0 0 0 0 ...</span>
<span class="r-out co"><span class="r-pr">#&gt;</span>  $ y2002: int  0 0 0 0 0 0 0 0 0 0 ...</span>
<span class="r-out co"><span class="r-pr">#&gt;</span>  $ y2003: int  0 0 0 0 0 0 0 0 0 0 ...</span>
<span class="r-out co"><span class="r-pr">#&gt;</span>  $ y2004: int  0 0 0 0 0 0 0 0 0 0 ...</span>
<span class="r-out co"><span class="r-pr">#&gt;</span>  $ y2005: int  0 0 0 0 0 0 0 0 0 0 ...</span>
<span class="r-out co"><span class="r-pr">#&gt;</span>  $ y2006: int  1 1 1 1 1 1 1 1 1 1 ...</span>
<span class="r-in"><span><span class="fu"><a href="https://rdrr.io/r/utils/head.html" class="external-link">head</a></span><span class="op">(</span><span class="va">CutthroatAL</span><span class="op">)</span></span></span>
<span class="r-out co"><span class="r-pr">#&gt;</span>   id y1998 y1999 y2000 y2001 y2002 y2003 y2004 y2005 y2006</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 1  1     0     0     0     0     0     0     0     0     1</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 2  2     0     0     0     0     0     0     0     0     1</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 3  3     0     0     0     0     0     0     0     0     1</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 4  4     0     0     0     0     0     0     0     0     1</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 5  5     0     0     0     0     0     0     0     0     1</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> 6  6     0     0     0     0     0     0     0     0     1</span>
<span class="r-in"><span></span></span>
</code></pre></div>
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