% Generated by roxygen2: do not edit by hand
% Please edit documentation in R/order.R
\name{make_ordering}
\alias{make_ordering}
\title{Make an object representing an ordering, usually from a hierarchical clustering.}
\usage{
make_ordering(mat, enable = TRUE, fast = FALSE)
}
\arguments{
\item{mat}{Matrix suitably transformed so distances between rows are meaningful.}

\item{enable}{If false, don't perform clustering.}

\item{fast}{If true, just order rows with a simple one dimensional PCA.}
}
\description{
Performs hierarchical clustering, and then further refines the order using the seriation library.
}
